RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 SLC52A2Q9HAB3 445 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 MINPP1Q9UNW1 487 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 MAPRE3Q9UPY8 281 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 ZNF281Q9Y2X9 895 aa4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 SF3B6Q9Y3B4 125 aaKnown RBP4.52□□□□□ -1.69
HMGB1P27-201ENST00000431429 IRS4O14654 1257 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 VAMP4O75379 141 aa4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 CPP00450 1065 aa4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 BMP8BP34820 402 aa4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 KCNMA1Q12791 1236 aa4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 CPSF6Q16630 551 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 C21orf62-AS1Q17RA5 79 aa4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 CYP27C1Q4G0S4 372 aa4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 NOL9Q5SY16 702 aaKnown RBP4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 STYK1Q6J9G0 422 aa4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 MAMDC2Q7Z304 686 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 SPACA3Q8IXA5 215 aa4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 DHX37Q8IY37 1157 aaKnown RBP4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 AFAP1L2Q8N4X5 818 aa4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 ZNF655Q8N720 491 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 KCTD13Q8WZ19 329 aa4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 PTPRN2Q92932 1015 aa4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 ORAI3Q9BRQ5 295 aa4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 TARS2Q9BW92 718 aaKnown RBP4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 SLC12A9Q9BXP2 914 aa4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 TYW1Q9NV66 732 aaKnown RBP4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 MAGEC2Q9UBF1 373 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 SFMBT1Q9UHJ3 866 aa4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 PLAGL2Q9UPG8 496 aa4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 ASXL2Q76L83 1435 aa4.51□□□□□ -1.69
HMGB1P27-201ENST00000431429 PDE8AO60658 829 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 EFCAB14O75071 495 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 RAB11FIP3O75154 756 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 ZNF205O95201 554 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 H2AFB1P0C5Y9 115 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 H2AFB2P0C5Z0 115 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 ITIH2P19823 946 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 IBSPP21815 317 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 GATA4P43694 442 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 CEBPAP49715 358 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 AMPD2Q01433 879 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 CYP27A1Q02318 531 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 NFIAQ12857 509 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 PPP2R5DQ14738 602 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 RTP2Q5QGT7 225 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 RCSD1Q6JBY9 416 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 CRTC3Q6UUV7 619 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 RSPO2Q6UXX9 243 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 BRAPQ7Z569 592 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 FGD2Q7Z6J4 655 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 THAP5Q7Z6K1 395 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 LRRTM3Q86VH5 581 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 TSPYL5Q86VY4 417 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 FRS2Q8WU20 508 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 DDX1Q92499 740 aaKnown RBP4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 PPP1R14AQ96A00 147 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 TCTN2Q96GX1 697 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 ZDHHC15Q96MV8 337 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 FCRL3Q96P31 734 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 DBNDD2Q9BQY9 259 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 CAAP1Q9H8G2 361 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 CWC22Q9HCG8 908 aaKnown RBP4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 TPSG1Q9NRR2 321 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 SEMA3GQ9NS98 782 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 STOML1Q9UBI4 398 aa4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 GPR55Q9Y2T6 319 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P27-201ENST00000431429 NPTXRO95502 500 aa4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 EYA4O95677 639 aa4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 CBX7O95931 251 aa4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 THBDP07204 575 aa4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 SNRPB2P08579 225 aaKnown RBP4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 MYCLP1P12525 358 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 VAV1P15498 845 aa4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 KCNA6P17658 529 aa4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 POU4F1Q01851 419 aa4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 SCRN1Q12765 414 aa4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 PRSS53Q2L4Q9 553 aa4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 USHBP1Q8N6Y0 703 aa4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 LINC00116Q8NCU8 138 aa4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 CHAC2Q8WUX2 184 aa4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 TP53INP1Q96A56 240 aa4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 MFSD14AQ96MC6 490 aa4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 ZFYVE21Q9BQ24 234 aa4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 DSCC1Q9BVC3 393 aa4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 MTFR1LQ9H019 292 aa4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 DDX56Q9NY93 547 aaKnown RBP4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 STK17AQ9UEE5 414 aa4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 BACE2Q9Y5Z0 518 aa4.49□□□□□ -1.69
HMGB1P27-201ENST00000431429 TCRBV16S1A1N1A0A5B0 115 aa4.48□□□□□ -1.69
HMGB1P27-201ENST00000431429 BLACEA4D250 179 aa4.48□□□□□ -1.69
HMGB1P27-201ENST00000431429 FAM181BA6NEQ2 426 aa4.48□□□□□ -1.69
HMGB1P27-201ENST00000431429 WNT9AO14904 365 aa4.48□□□□□ -1.69
HMGB1P27-201ENST00000431429 ASLP04424 464 aa4.48□□□□□ -1.69
HMGB1P27-201ENST00000431429 CEACAM5P06731 702 aa4.48□□□□□ -1.69
HMGB1P27-201ENST00000431429 IFNGR1P15260 489 aa4.48□□□□□ -1.69
HMGB1P27-201ENST00000431429 CDKN1CP49918 316 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P27-201ENST00000431429 CLCN7P51798 805 aa4.48□□□□□ -1.69
HMGB1P27-201ENST00000431429 ANAPC15P60006 121 aa4.48□□□□□ -1.69
HMGB1P27-201ENST00000431429 NKAPLQ5M9Q1 402 aa4.48□□□□□ -1.69
HMGB1P27-201ENST00000431429 E4F1Q66K89 784 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms