RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 CHST13Q8NET6 341 aa12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 FERMT2Q96AC1 680 aa12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 LRCH3Q96II8 777 aa12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 PRKAG2Q9UGJ0 569 aa12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 FBXO40Q9UH90 709 aa12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 ZHX1Q9UKY1 873 aaPredicted RBP12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 MTMR7Q9Y216 660 aa12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 SYNGAP1Q96PV0 1343 aa12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 LCTP09848 1927 aa12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 DNAJC25-GNG10A0A024R161 153 aa12□□□□□ -0.49
HMGN1P38-201ENST00000431116 PGK1P00558 417 aa12□□□□□ -0.49
HMGN1P38-201ENST00000431116 IGHDP01880 384 aa12□□□□□ -0.49
HMGN1P38-201ENST00000431116 FGAP02671 866 aa12□□□□□ -0.49
HMGN1P38-201ENST00000431116 FGRP09769 529 aa12□□□□□ -0.49
HMGN1P38-201ENST00000431116 FDX1P10109 184 aa12□□□□□ -0.49
HMGN1P38-201ENST00000431116 HSPD1P10809 573 aaKnown RBP12□□□□□ -0.49
HMGN1P38-201ENST00000431116 ADCYAP1R1P41586 468 aa12□□□□□ -0.49
HMGN1P38-201ENST00000431116 FXR2P51116 673 aaKnown RBP eCLIP12□□□□□ -0.49
HMGN1P38-201ENST00000431116 HAND2P61296 217 aa12□□□□□ -0.49
HMGN1P38-201ENST00000431116 NUCB1Q02818 461 aa12□□□□□ -0.49
HMGN1P38-201ENST00000431116 CCDC96Q2M329 555 aa12□□□□□ -0.49
HMGN1P38-201ENST00000431116 TRIM60Q495X7 471 aa12□□□□□ -0.49
HMGN1P38-201ENST00000431116 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12□□□□□ -0.49
HMGN1P38-201ENST00000431116 PLEKHM2Q8IWE5 1019 aa12□□□□□ -0.49
HMGN1P38-201ENST00000431116 CHURC1Q8WUH1 139 aa12□□□□□ -0.49
HMGN1P38-201ENST00000431116 STAG1Q8WVM7 1258 aa12□□□□□ -0.49
HMGN1P38-201ENST00000431116 ACAD9Q9H845 621 aa12□□□□□ -0.49
HMGN1P38-201ENST00000431116 PRDM5Q9NQX1 630 aaPredicted RBP12□□□□□ -0.49
HMGN1P38-201ENST00000431116 SNAI1O95863 264 aaPredicted RBP11.99□□□□□ -0.49
HMGN1P38-201ENST00000431116 SNX17Q15036 470 aa11.99□□□□□ -0.49
HMGN1P38-201ENST00000431116 RCSD1Q6JBY9 416 aa11.99□□□□□ -0.49
HMGN1P38-201ENST00000431116 CCDC174Q6PII3 467 aa11.99□□□□□ -0.49
HMGN1P38-201ENST00000431116 MAMDC4Q6UXC1 1216 aa11.99□□□□□ -0.49
HMGN1P38-201ENST00000431116 SLC39A5Q6ZMH5 540 aa11.99□□□□□ -0.49
HMGN1P38-201ENST00000431116 ZNF467Q7Z7K2 595 aaPredicted RBP11.99□□□□□ -0.49
HMGN1P38-201ENST00000431116 RNF180Q86T96 592 aa11.99□□□□□ -0.49
HMGN1P38-201ENST00000431116 PIP4P2Q8N4L2 257 aa11.99□□□□□ -0.49
HMGN1P38-201ENST00000431116 AGBL1Q96MI9 1066 aa11.99□□□□□ -0.49
HMGN1P38-201ENST00000431116 LBHD1Q9BQE6 289 aaPredicted RBP11.99□□□□□ -0.49
HMGN1P38-201ENST00000431116 RNF146Q9NTX7 359 aa11.99□□□□□ -0.49
HMGN1P38-201ENST00000431116 PHF24Q9UPV7 400 aa11.99□□□□□ -0.49
HMGN1P38-201ENST00000431116 ZNF536O15090 1300 aa11.99□□□□□ -0.49
HMGN1P38-201ENST00000431116 SYNRGQ9UMZ2 1314 aa11.98□□□□□ -0.49
HMGN1P38-201ENST00000431116 PLA2G6O60733 806 aa11.98□□□□□ -0.49
HMGN1P38-201ENST00000431116 ADAMTS4O75173 837 aa11.98□□□□□ -0.49
HMGN1P38-201ENST00000431116 TOP1P11387 765 aaKnown RBP11.98□□□□□ -0.49
HMGN1P38-201ENST00000431116 ALAS1P13196 640 aa11.98□□□□□ -0.49
HMGN1P38-201ENST00000431116 SDSP20132 328 aa11.98□□□□□ -0.49
HMGN1P38-201ENST00000431116 MFAP1P55081 439 aaKnown RBP11.98□□□□□ -0.49
HMGN1P38-201ENST00000431116 SNAP25P60880 206 aa11.98□□□□□ -0.49
HMGN1P38-201ENST00000431116 ARMCX2Q7L311 632 aa11.98□□□□□ -0.49
HMGN1P38-201ENST00000431116 TBC1D10CQ8IV04 446 aa11.98□□□□□ -0.49
HMGN1P38-201ENST00000431116 DCAF4Q8WV16 495 aa11.98□□□□□ -0.49
HMGN1P38-201ENST00000431116 FGD4Q96M96 766 aa11.98□□□□□ -0.49
HMGN1P38-201ENST00000431116 OSBPL3Q9H4L5 887 aa11.98□□□□□ -0.49
HMGN1P38-201ENST00000431116 A1CFQ9NQ94 594 aaKnown RBP11.98□□□□□ -0.49
HMGN1P38-201ENST00000431116 DIAPH3Q9NSV4 1193 aa11.98□□□□□ -0.49
HMGN1P38-201ENST00000431116 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.98□□□□□ -0.49
HMGN1P38-201ENST00000431116 FAM184BQ9ULE4 1060 aa11.98□□□□□ -0.49
HMGN1P38-201ENST00000431116 PRR12Q9ULL5 1215 aa11.98□□□□□ -0.49
HMGN1P38-201ENST00000431116 FRMPD2Q68DX3 1309 aaPredicted RBP11.97□□□□□ -0.49
HMGN1P38-201ENST00000431116 A0A1W2PQ45 241 aaPredicted RBP11.97□□□□□ -0.49
HMGN1P38-201ENST00000431116 A0A1W2PQY0 241 aa11.97□□□□□ -0.49
HMGN1P38-201ENST00000431116 POTEB2H3BUK9 544 aa11.97□□□□□ -0.49
HMGN1P38-201ENST00000431116 NOVP48745 357 aa11.97□□□□□ -0.49
HMGN1P38-201ENST00000431116 CNTN2Q02246 1040 aa11.97□□□□□ -0.49
HMGN1P38-201ENST00000431116 TKFCQ3LXA3 575 aa11.97□□□□□ -0.49
HMGN1P38-201ENST00000431116 LRIT3Q3SXY7 679 aa11.97□□□□□ -0.49
HMGN1P38-201ENST00000431116 CWC27Q6UX04 472 aaKnown RBP11.97□□□□□ -0.49
HMGN1P38-201ENST00000431116 MFSD6Q6ZSS7 791 aa11.97□□□□□ -0.49
HMGN1P38-201ENST00000431116 CCDC144CPQ8IYA2 1237 aa11.97□□□□□ -0.49
HMGN1P38-201ENST00000431116 FAM133AQ8N9E0 248 aa11.97□□□□□ -0.49
HMGN1P38-201ENST00000431116 TRERF1Q96PN7 1200 aa11.97□□□□□ -0.49
HMGN1P38-201ENST00000431116 TMEM47Q9BQJ4 181 aa11.97□□□□□ -0.49
HMGN1P38-201ENST00000431116 PDLIM7Q9NR12 457 aa11.97□□□□□ -0.49
HMGN1P38-201ENST00000431116 CCPG1Q9ULG6 757 aa11.97□□□□□ -0.49
HMGN1P38-201ENST00000431116 MYH6P13533 1939 aa11.96□□□□□ -0.49
HMGN1P38-201ENST00000431116 NEDD4P46934 1319 aa11.96□□□□□ -0.49
HMGN1P38-201ENST00000431116 SZT2Q5T011 3432 aa11.96□□□□□ -0.49
HMGN1P38-201ENST00000431116 ADCY6O43306 1168 aa11.96□□□□□ -0.49
HMGN1P38-201ENST00000431116 SLC16A2P36021 539 aa11.96□□□□□ -0.49
HMGN1P38-201ENST00000431116 TLE2Q04725 743 aa11.96□□□□□ -0.49
HMGN1P38-201ENST00000431116 ACVR2BQ13705 512 aa11.96□□□□□ -0.49
HMGN1P38-201ENST00000431116 CCDC144BQ3MJ40 725 aa11.96□□□□□ -0.49
HMGN1P38-201ENST00000431116 AKNAD1Q5T1N1 836 aa11.96□□□□□ -0.49
HMGN1P38-201ENST00000431116 C1orf53Q5VUE5 145 aa11.96□□□□□ -0.49
HMGN1P38-201ENST00000431116 TTBK2Q6IQ55 1244 aa11.96□□□□□ -0.49
HMGN1P38-201ENST00000431116 ABHD16BQ9H3Z7 469 aa11.96□□□□□ -0.49
HMGN1P38-201ENST00000431116 RNF41Q9H4P4 317 aaPredicted RBP11.96□□□□□ -0.49
HMGN1P38-201ENST00000431116 TCP11L1Q9NUJ3 509 aa11.96□□□□□ -0.49
HMGN1P38-201ENST00000431116 MYADML2A6NDP7 307 aa11.95□□□□□ -0.5
HMGN1P38-201ENST00000431116 HIP1O00291 1037 aa11.95□□□□□ -0.5
HMGN1P38-201ENST00000431116 PQBP1O60828 265 aaKnown RBP11.95□□□□□ -0.5
HMGN1P38-201ENST00000431116 DUSP11O75319 330 aaKnown RBP11.95□□□□□ -0.5
HMGN1P38-201ENST00000431116 ICAM1P05362 532 aa11.95□□□□□ -0.5
HMGN1P38-201ENST00000431116 C6orf222P0C671 652 aaPredicted RBP11.95□□□□□ -0.5
HMGN1P38-201ENST00000431116 PCP11498 1178 aaKnown RBP11.95□□□□□ -0.5
HMGN1P38-201ENST00000431116 ACLYP53396 1101 aa11.95□□□□□ -0.5
HMGN1P38-201ENST00000431116 MUM1L1Q5H9M0 696 aa11.95□□□□□ -0.5
HMGN1P38-201ENST00000431116 SYDE2Q5VT97 1194 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms