RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 CCPG1Q9ULG6 757 aa16.95■□□□□ 0.3
SGCE-204ENST00000428696 PALM3A6NDB9 673 aaPredicted RBP16.94■□□□□ 0.3
SGCE-204ENST00000428696 GOLGA8AA7E2F4 631 aa16.94■□□□□ 0.3
SGCE-204ENST00000428696 SLC25A27O95847 323 aa16.94■□□□□ 0.3
SGCE-204ENST00000428696 FDX1P10109 184 aa16.94■□□□□ 0.3
SGCE-204ENST00000428696 PRKCZQ05513 592 aa16.94■□□□□ 0.3
SGCE-204ENST00000428696 APOA5Q6Q788 366 aa16.94■□□□□ 0.3
SGCE-204ENST00000428696 BTNL9Q6UXG8 535 aa16.94■□□□□ 0.3
SGCE-204ENST00000428696 GPR142Q7Z601 462 aa16.94■□□□□ 0.3
SGCE-204ENST00000428696 ZNF214Q9UL59 606 aaPredicted RBP16.94■□□□□ 0.3
SGCE-204ENST00000428696 GABRQQ9UN88 632 aa16.94■□□□□ 0.3
SGCE-204ENST00000428696 RIPK3Q9Y572 518 aa16.94■□□□□ 0.3
SGCE-204ENST00000428696 TAL1P17542 331 aaPredicted RBP16.93■□□□□ 0.3
SGCE-204ENST00000428696 RTN1Q16799 776 aa16.93■□□□□ 0.3
SGCE-204ENST00000428696 USH1GQ495M9 461 aa16.93■□□□□ 0.3
SGCE-204ENST00000428696 SGMS1Q86VZ5 419 aa16.93■□□□□ 0.3
SGCE-204ENST00000428696 RIOX2Q8IUF8 465 aa16.93■□□□□ 0.3
SGCE-204ENST00000428696 REPS2Q8NFH8 660 aa16.93■□□□□ 0.3
SGCE-204ENST00000428696 BACH2Q9BYV9 841 aa16.93■□□□□ 0.3
SGCE-204ENST00000428696 MROH8Q9H579 483 aa16.93■□□□□ 0.3
SGCE-204ENST00000428696 BIN2Q9UBW5 565 aaPredicted RBP16.93■□□□□ 0.3
SGCE-204ENST00000428696 SRRDQ9UH36 339 aa16.93■□□□□ 0.3
SGCE-204ENST00000428696 GNRH1P01148 92 aa16.92■□□□□ 0.3
SGCE-204ENST00000428696 FCER1AP12319 257 aa16.92■□□□□ 0.3
SGCE-204ENST00000428696 CYP2B6P20813 491 aa16.92■□□□□ 0.3
SGCE-204ENST00000428696 FLT3LGP49771 235 aa16.92■□□□□ 0.3
SGCE-204ENST00000428696 GNAQP50148 359 aa16.92■□□□□ 0.3
SGCE-204ENST00000428696 METAP2P50579 478 aaKnown RBP eCLIP16.92■□□□□ 0.3
SGCE-204ENST00000428696 CCT2P78371 535 aaKnown RBP16.92■□□□□ 0.3
SGCE-204ENST00000428696 STK3Q13188 491 aa16.92■□□□□ 0.3
SGCE-204ENST00000428696 CDC37Q16543 378 aaPredicted RBP16.92■□□□□ 0.3
SGCE-204ENST00000428696 DPP9Q86TI2 863 aa16.92■□□□□ 0.3
SGCE-204ENST00000428696 DDX11Q96FC9 970 aa16.92■□□□□ 0.3
SGCE-204ENST00000428696 TRERF1Q96PN7 1200 aa16.92■□□□□ 0.3
SGCE-204ENST00000428696 MMP19Q99542 508 aa16.92■□□□□ 0.3
SGCE-204ENST00000428696 NUDT12Q9BQG2 462 aa16.92■□□□□ 0.3
SGCE-204ENST00000428696 RANBP17Q9H2T7 1088 aaKnown RBP16.92■□□□□ 0.3
SGCE-204ENST00000428696 JMJD4Q9H9V9 463 aa16.92■□□□□ 0.3
SGCE-204ENST00000428696 PLEKHA8P1O95397 391 aa16.91■□□□□ 0.3
SGCE-204ENST00000428696 MYCP01106 439 aaPredicted RBP16.91■□□□□ 0.3
SGCE-204ENST00000428696 KCTD2Q14681 263 aa16.91■□□□□ 0.3
SGCE-204ENST00000428696 NBPF11Q86T75 865 aa16.91■□□□□ 0.3
SGCE-204ENST00000428696 ANKRD35Q8N283 1001 aa16.91■□□□□ 0.3
SGCE-204ENST00000428696 MCOLN1Q9GZU1 580 aa16.91■□□□□ 0.3
SGCE-204ENST00000428696 PTPN22Q9Y2R2 807 aa16.91■□□□□ 0.3
SGCE-204ENST00000428696 hCG_1642624A0A1W2PR95 340 aa16.9■□□□□ 0.3
SGCE-204ENST00000428696 ICAM1P05362 532 aa16.9■□□□□ 0.3
SGCE-204ENST00000428696 PTPREP23469 700 aa16.9■□□□□ 0.3
SGCE-204ENST00000428696 COPB2P35606 906 aa16.9■□□□□ 0.3
SGCE-204ENST00000428696 OAZ1P54368 228 aa16.9■□□□□ 0.3
SGCE-204ENST00000428696 TOB2Q14106 344 aaPredicted RBP16.9■□□□□ 0.3
SGCE-204ENST00000428696 PKN2Q16513 984 aaKnown RBP16.9■□□□□ 0.3
SGCE-204ENST00000428696 QRICH1Q2TAL8 776 aa16.9■□□□□ 0.3
SGCE-204ENST00000428696 FBXO11Q86XK2 927 aa16.9■□□□□ 0.3
SGCE-204ENST00000428696 TNS4Q8IZW8 715 aa16.9■□□□□ 0.3
SGCE-204ENST00000428696 SRBD1Q8N5C6 995 aaKnown RBP16.9■□□□□ 0.3
SGCE-204ENST00000428696 SHCBP1Q8NEM2 672 aa16.9■□□□□ 0.3
SGCE-204ENST00000428696 RRP36Q96EU6 259 aaKnown RBP16.9■□□□□ 0.3
SGCE-204ENST00000428696 PIGSQ96S52 555 aa16.9■□□□□ 0.3
SGCE-204ENST00000428696 MAP3K14Q99558 947 aa16.9■□□□□ 0.3
SGCE-204ENST00000428696 LZTS2Q9BRK4 669 aa16.9■□□□□ 0.3
SGCE-204ENST00000428696 RNF146Q9NTX7 359 aa16.9■□□□□ 0.3
SGCE-204ENST00000428696 PTCH2Q9Y6C5 1203 aa16.9■□□□□ 0.3
SGCE-204ENST00000428696 STRNO43815 780 aa16.89■□□□□ 0.29
SGCE-204ENST00000428696 PGK2P07205 417 aa16.89■□□□□ 0.29
SGCE-204ENST00000428696 ADORA2AP29274 412 aa16.89■□□□□ 0.29
SGCE-204ENST00000428696 PDIA3P30101 505 aaKnown RBP16.89■□□□□ 0.29
SGCE-204ENST00000428696 ADD1P35611 737 aaKnown RBP16.89■□□□□ 0.29
SGCE-204ENST00000428696 AK2P54819 239 aa16.89■□□□□ 0.29
SGCE-204ENST00000428696 ANKRD1Q15327 319 aa16.89■□□□□ 0.29
SGCE-204ENST00000428696 RBM28Q9NW13 759 aaKnown RBP16.89■□□□□ 0.29
SGCE-204ENST00000428696 SEC63Q9UGP8 760 aaKnown RBP16.89■□□□□ 0.29
SGCE-204ENST00000428696 ZNF536O15090 1300 aa16.89■□□□□ 0.29
SGCE-204ENST00000428696 CCDC196A0A1B0GTZ2 297 aa16.88■□□□□ 0.29
SGCE-204ENST00000428696 SLC15A5A6NIM6 579 aa16.88■□□□□ 0.29
SGCE-204ENST00000428696 ATP2A1O14983 1001 aa16.88■□□□□ 0.29
SGCE-204ENST00000428696 ADCY3O60266 1144 aa16.88■□□□□ 0.29
SGCE-204ENST00000428696 PPFIA3O75145 1194 aa16.88■□□□□ 0.29
SGCE-204ENST00000428696 ELNP15502 786 aa16.88■□□□□ 0.29
SGCE-204ENST00000428696 RGS2P41220 211 aa16.88■□□□□ 0.29
SGCE-204ENST00000428696 PRMT2P55345 433 aa16.88■□□□□ 0.29
SGCE-204ENST00000428696 MUM1L1Q5H9M0 696 aa16.88■□□□□ 0.29
SGCE-204ENST00000428696 FBXO46Q6PJ61 603 aaPredicted RBP16.88■□□□□ 0.29
SGCE-204ENST00000428696 NSMFQ6X4W1 530 aa16.88■□□□□ 0.29
SGCE-204ENST00000428696 CHST13Q8NET6 341 aa16.88■□□□□ 0.29
SGCE-204ENST00000428696 SOCS4Q8WXH5 440 aa16.88■□□□□ 0.29
SGCE-204ENST00000428696 ACAD9Q9H845 621 aa16.88■□□□□ 0.29
SGCE-204ENST00000428696 NCOA5Q9HCD5 579 aaKnown RBP16.88■□□□□ 0.29
SGCE-204ENST00000428696 FBXO40Q9UH90 709 aa16.88■□□□□ 0.29
SGCE-204ENST00000428696 GJD2Q9UKL4 321 aa16.88■□□□□ 0.29
SGCE-204ENST00000428696 ZBTB5O15062 677 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 CYTH3O43739 400 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 CDC27P30260 824 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 RBM25P49756 843 aaKnown RBP16.87■□□□□ 0.29
SGCE-204ENST00000428696 MAP2K5Q13163 448 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 SLC9C1Q4G0N8 1177 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 TMTC3Q6ZXV5 915 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 SH3TC2Q8TF17 1288 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 AMNQ9BXJ7 453 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 PCDHA1Q9Y5I3 950 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms