RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.71■□□□□ 0.75
VARS-216ENST00000428445 DUSP11O75319 330 aaKnown RBP19.71■□□□□ 0.75
VARS-216ENST00000428445 ASGR1P07306 291 aa19.71■□□□□ 0.75
VARS-216ENST00000428445 ZFYP08048 801 aaPredicted RBP19.71■□□□□ 0.75
VARS-216ENST00000428445 TSPY3P0CV98 308 aa19.71■□□□□ 0.75
VARS-216ENST00000428445 TSPY8P0CW00 308 aa19.71■□□□□ 0.75
VARS-216ENST00000428445 BMP3P12645 472 aa19.71■□□□□ 0.75
VARS-216ENST00000428445 GNAT2P19087 354 aa19.71■□□□□ 0.75
VARS-216ENST00000428445 CCDC129Q6ZRS4 1044 aa19.71■□□□□ 0.75
VARS-216ENST00000428445 ARMCX2Q7L311 632 aa19.71■□□□□ 0.75
VARS-216ENST00000428445 CCDC144CPQ8IYA2 1237 aa19.71■□□□□ 0.75
VARS-216ENST00000428445 NEDD1Q8NHV4 660 aa19.71■□□□□ 0.75
VARS-216ENST00000428445 PI4K2BQ8TCG2 481 aa19.71■□□□□ 0.75
VARS-216ENST00000428445 NUP133Q8WUM0 1156 aa19.71■□□□□ 0.75
VARS-216ENST00000428445 DCDC2CA8MYV0 355 aa19.7■□□□□ 0.74
VARS-216ENST00000428445 MCCP23508 829 aa19.7■□□□□ 0.74
VARS-216ENST00000428445 BEX3Q00994 111 aa19.7■□□□□ 0.74
VARS-216ENST00000428445 ZNF467Q7Z7K2 595 aaPredicted RBP19.7■□□□□ 0.74
VARS-216ENST00000428445 GMCL1P1Q8NEA9 526 aa19.7■□□□□ 0.74
VARS-216ENST00000428445 KATNBL1Q9H079 304 aa19.7■□□□□ 0.74
VARS-216ENST00000428445 MTMR7Q9Y216 660 aa19.7■□□□□ 0.74
VARS-216ENST00000428445 SOWAHBA6NEL2 793 aa19.69■□□□□ 0.74
VARS-216ENST00000428445 MOXD2PA6NHM9 499 aa19.69■□□□□ 0.74
VARS-216ENST00000428445 CTAGE5O15320 804 aa19.69■□□□□ 0.74
VARS-216ENST00000428445 NMT2O60551 498 aa19.69■□□□□ 0.74
VARS-216ENST00000428445 TIMP1P01033 207 aa19.69■□□□□ 0.74
VARS-216ENST00000428445 CDK7P50613 346 aa19.69■□□□□ 0.74
VARS-216ENST00000428445 CTDSPL2Q05D32 466 aa19.69■□□□□ 0.74
VARS-216ENST00000428445 PPARAQ07869 468 aa19.69■□□□□ 0.74
VARS-216ENST00000428445 GNASQ5JWF2 1037 aa19.69■□□□□ 0.74
VARS-216ENST00000428445 C16orf59Q7L2K0 433 aa19.69■□□□□ 0.74
VARS-216ENST00000428445 CHST13Q8NET6 341 aa19.69■□□□□ 0.74
VARS-216ENST00000428445 TOX2Q96NM4 488 aa19.69■□□□□ 0.74
VARS-216ENST00000428445 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.69■□□□□ 0.743e-6■■□□□ 13.4
VARS-216ENST00000428445 FSD1Q9BTV5 496 aa19.69■□□□□ 0.74
VARS-216ENST00000428445 ABHD16BQ9H3Z7 469 aa19.69■□□□□ 0.74
VARS-216ENST00000428445 ZNF536O15090 1300 aa19.69■□□□□ 0.74
VARS-216ENST00000428445 GRXCR1A8MXD5 290 aa19.68■□□□□ 0.74
VARS-216ENST00000428445 FOXP2O15409 715 aa19.68■□□□□ 0.74
VARS-216ENST00000428445 ACRP10323 421 aa19.68■□□□□ 0.74
VARS-216ENST00000428445 GJA9P57773 515 aa19.68■□□□□ 0.74
VARS-216ENST00000428445 GRIN2CQ14957 1233 aa19.68■□□□□ 0.74
VARS-216ENST00000428445 TMEM63BQ5T3F8 832 aa19.68■□□□□ 0.74
VARS-216ENST00000428445 CCDC174Q6PII3 467 aa19.68■□□□□ 0.74
VARS-216ENST00000428445 KCTD1Q719H9 257 aa19.68■□□□□ 0.74
VARS-216ENST00000428445 GLT1D1Q96MS3 346 aa19.68■□□□□ 0.74
VARS-216ENST00000428445 PURBQ96QR8 312 aaKnown RBP19.68■□□□□ 0.74
VARS-216ENST00000428445 NAPBQ9H115 298 aa19.68■□□□□ 0.74
VARS-216ENST00000428445 ZNF287Q9HBT7 754 aa19.68■□□□□ 0.74
VARS-216ENST00000428445 TBX21Q9UL17 535 aa19.68■□□□□ 0.74
VARS-216ENST00000428445 FOSL2P15408 326 aa19.67■□□□□ 0.74
VARS-216ENST00000428445 PDE4BQ07343 736 aa19.67■□□□□ 0.74
VARS-216ENST00000428445 IKQ13123 557 aaPredicted RBP19.67■□□□□ 0.74
VARS-216ENST00000428445 MUM1L1Q5H9M0 696 aa19.67■□□□□ 0.74
VARS-216ENST00000428445 ZMYM1Q5SVZ6 1142 aa19.67■□□□□ 0.74
VARS-216ENST00000428445 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.67■□□□□ 0.74
VARS-216ENST00000428445 FAM133AQ8N9E0 248 aa19.67■□□□□ 0.74
VARS-216ENST00000428445 NACAP1Q9BZK3 213 aa19.67■□□□□ 0.74
VARS-216ENST00000428445 PPP1R12CQ9BZL4 782 aa19.67■□□□□ 0.74
VARS-216ENST00000428445 UPF3AQ9H1J1 476 aaKnown RBP19.67■□□□□ 0.74
VARS-216ENST00000428445 A1CFQ9NQ94 594 aaKnown RBP19.67■□□□□ 0.74
VARS-216ENST00000428445 IL17RBQ9NRM6 502 aa19.67■□□□□ 0.74
VARS-216ENST00000428445 RNF146Q9NTX7 359 aa19.67■□□□□ 0.74
VARS-216ENST00000428445 ASTN1O14525 1302 aa19.67■□□□□ 0.74
VARS-216ENST00000428445 ALAS1P13196 640 aa19.66■□□□□ 0.74
VARS-216ENST00000428445 CSF2RAP15509 400 aa19.66■□□□□ 0.74
VARS-216ENST00000428445 CST5P28325 142 aaPredicted RBP19.66■□□□□ 0.74
VARS-216ENST00000428445 PBX2P40425 430 aa19.66■□□□□ 0.74
VARS-216ENST00000428445 SLC1A4P43007 532 aa19.66■□□□□ 0.74
VARS-216ENST00000428445 STAT2P52630 851 aa19.66■□□□□ 0.74
VARS-216ENST00000428445 OAZ1P54368 228 aa19.66■□□□□ 0.74
VARS-216ENST00000428445 VPS53Q5VIR6 699 aa19.66■□□□□ 0.74
VARS-216ENST00000428445 NOL8Q76FK4 1167 aaKnown RBP19.66■□□□□ 0.74
VARS-216ENST00000428445 EEPD1Q7L9B9 569 aa19.66■□□□□ 0.74
VARS-216ENST00000428445 STAG1Q8WVM7 1258 aa19.66■□□□□ 0.74
VARS-216ENST00000428445 TRERF1Q96PN7 1200 aa19.66■□□□□ 0.74
VARS-216ENST00000428445 ACAD9Q9H845 621 aa19.66■□□□□ 0.74
VARS-216ENST00000428445 PDGFCQ9NRA1 345 aa19.66■□□□□ 0.74
VARS-216ENST00000428445 FBXO40Q9UH90 709 aa19.66■□□□□ 0.74
VARS-216ENST00000428445 ELP1O95163 1332 aa19.66■□□□□ 0.74
VARS-216ENST00000428445 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.65■□□□□ 0.74
VARS-216ENST00000428445 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.65■□□□□ 0.74
VARS-216ENST00000428445 ARVCFO00192 962 aa19.65■□□□□ 0.74
VARS-216ENST00000428445 DNAJB2P25686 324 aa19.65■□□□□ 0.74
VARS-216ENST00000428445 TNFAIP2Q03169 654 aa19.65■□□□□ 0.74
VARS-216ENST00000428445 TMEM240Q5SV17 173 aa19.65■□□□□ 0.74
VARS-216ENST00000428445 MFSD5Q6N075 450 aa19.65■□□□□ 0.74
VARS-216ENST00000428445 PCSK9Q8NBP7 692 aaKnown RBP19.65■□□□□ 0.74
VARS-216ENST00000428445 SPC25Q9HBM1 224 aa19.65■□□□□ 0.74
VARS-216ENST00000428445 STX8Q9UNK0 236 aa19.65■□□□□ 0.74
VARS-216ENST00000428445 TTC41PQ6P2S7 1318 aa19.65■□□□□ 0.74
VARS-216ENST00000428445 PLIN4Q96Q06 1357 aa19.65■□□□□ 0.74
VARS-216ENST00000428445 SPTBN5Q9NRC6 3674 aaKnown RBP19.64■□□□□ 0.74
VARS-216ENST00000428445 A0A0U1RQG5 324 aaPredicted RBP19.64■□□□□ 0.73
VARS-216ENST00000428445 CYP2C18P33260 490 aa19.64■□□□□ 0.73
VARS-216ENST00000428445 CXCL17Q6UXB2 119 aa19.64■□□□□ 0.73
VARS-216ENST00000428445 FAM126BQ8IXS8 530 aa19.64■□□□□ 0.73
VARS-216ENST00000428445 USP38Q8NB14 1042 aa19.64■□□□□ 0.73
VARS-216ENST00000428445 CHURC1Q8WUH1 139 aa19.64■□□□□ 0.73
VARS-216ENST00000428445 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms