RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-215ENST00000427487 PIGSQ96S52 555 aa13.92□□□□□ -0.18
HDLBP-215ENST00000427487 ALG1Q9BT22 464 aa13.92□□□□□ -0.18
HDLBP-215ENST00000427487 AMNQ9BXJ7 453 aa13.92□□□□□ -0.18
HDLBP-215ENST00000427487 A0A0G2JMZ2 1700 aa13.92□□□□□ -0.18
HDLBP-215ENST00000427487 SPDYE16A6NNV3 312 aaPredicted RBP13.91□□□□□ -0.18
HDLBP-215ENST00000427487 BTBD19C9JJ37 291 aa13.91□□□□□ -0.18
HDLBP-215ENST00000427487 ALDH1A1P00352 501 aa13.91□□□□□ -0.18
HDLBP-215ENST00000427487 ICAM1P05362 532 aa13.91□□□□□ -0.18
HDLBP-215ENST00000427487 CALML3P27482 149 aa13.91□□□□□ -0.18
HDLBP-215ENST00000427487 MAP2K2P36507 400 aa13.91□□□□□ -0.18
HDLBP-215ENST00000427487 GCLCP48506 637 aaPredicted RBP13.91□□□□□ -0.18
HDLBP-215ENST00000427487 NUCB2P80303 420 aa13.91□□□□□ -0.18
HDLBP-215ENST00000427487 QRICH1Q2TAL8 776 aa13.91□□□□□ -0.18
HDLBP-215ENST00000427487 TKFCQ3LXA3 575 aa13.91□□□□□ -0.18
HDLBP-215ENST00000427487 LARP1BQ659C4 914 aaKnown RBP13.91□□□□□ -0.18
HDLBP-215ENST00000427487 CMTR1Q8N1G2 835 aaKnown RBP13.91□□□□□ -0.18
HDLBP-215ENST00000427487 CCDC82Q8N4S0 544 aa13.91□□□□□ -0.18
HDLBP-215ENST00000427487 REPS2Q8NFH8 660 aa13.91□□□□□ -0.18
HDLBP-215ENST00000427487 KIFC2Q96AC6 838 aa13.91□□□□□ -0.18
HDLBP-215ENST00000427487 PARK7Q99497 189 aaKnown RBP13.91□□□□□ -0.18
HDLBP-215ENST00000427487 ASCC2Q9H1I8 757 aaPredicted RBP13.91□□□□□ -0.18
HDLBP-215ENST00000427487 FBXO28Q9NVF7 368 aa13.91□□□□□ -0.18
HDLBP-215ENST00000427487 MAP3K20Q9NYL2 800 aaKnown RBP13.91□□□□□ -0.18
HDLBP-215ENST00000427487 ISY1Q9ULR0 285 aaKnown RBP13.91□□□□□ -0.18
HDLBP-215ENST00000427487 RABGAP1Q9Y3P9 1069 aa13.91□□□□□ -0.18
HDLBP-215ENST00000427487 GNA11P29992 359 aa13.9□□□□□ -0.18
HDLBP-215ENST00000427487 HERVK_113P62684 666 aa13.9□□□□□ -0.18
HDLBP-215ENST00000427487 GHRHRQ02643 423 aa13.9□□□□□ -0.18
HDLBP-215ENST00000427487 DGKZQ13574 1117 aa13.9□□□□□ -0.18
HDLBP-215ENST00000427487 TRIM29Q14134 588 aa13.9□□□□□ -0.18
HDLBP-215ENST00000427487 MCTP2Q6DN12 878 aa13.9□□□□□ -0.18
HDLBP-215ENST00000427487 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.9□□□□□ -0.18
HDLBP-215ENST00000427487 FBXO11Q86XK2 927 aa13.9□□□□□ -0.18
HDLBP-215ENST00000427487 DAGLBQ8NCG7 672 aa13.9□□□□□ -0.18
HDLBP-215ENST00000427487 DDX11Q96FC9 970 aa13.9□□□□□ -0.18
HDLBP-215ENST00000427487 C8orf76Q96K31 380 aa13.9□□□□□ -0.18
HDLBP-215ENST00000427487 ZMYND12Q9H0C1 365 aa13.9□□□□□ -0.18
HDLBP-215ENST00000427487 ABCB11O95342 1321 aa13.9□□□□□ -0.19
HDLBP-215ENST00000427487 STXBP3O00186 592 aa13.89□□□□□ -0.19
HDLBP-215ENST00000427487 PDHXO00330 501 aa13.89□□□□□ -0.19
HDLBP-215ENST00000427487 STX6O43752 255 aa13.89□□□□□ -0.19
HDLBP-215ENST00000427487 SYT1P21579 422 aa13.89□□□□□ -0.19
HDLBP-215ENST00000427487 IFNL1Q8IU54 200 aa13.89□□□□□ -0.19
HDLBP-215ENST00000427487 BICD2Q8TD16 824 aa13.89□□□□□ -0.19
HDLBP-215ENST00000427487 ATG4CQ96DT6 458 aa13.89□□□□□ -0.19
HDLBP-215ENST00000427487 CAPNS2Q96L46 248 aa13.89□□□□□ -0.19
HDLBP-215ENST00000427487 PTPN18Q99952 460 aa13.89□□□□□ -0.19
HDLBP-215ENST00000427487 PHF20Q9BVI0 1012 aa13.89□□□□□ -0.19
HDLBP-215ENST00000427487 TEX13BQ9BXU2 312 aa13.89□□□□□ -0.19
HDLBP-215ENST00000427487 CPVLQ9H3G5 476 aa13.89□□□□□ -0.19
HDLBP-215ENST00000427487 VAT1LQ9HCJ6 419 aa13.89□□□□□ -0.19
HDLBP-215ENST00000427487 ZNF214Q9UL59 606 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-215ENST00000427487 MRPL11Q9Y3B7 192 aaKnown RBP13.89□□□□□ -0.19
HDLBP-215ENST00000427487 CTDP1Q9Y5B0 961 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-215ENST00000427487 ZNF536O15090 1300 aa13.89□□□□□ -0.19
HDLBP-215ENST00000427487 WDR33Q9C0J8 1336 aaKnown RBP13.89□□□□□ -0.19
HDLBP-215ENST00000427487 SLC25A27O95847 323 aa13.88□□□□□ -0.19
HDLBP-215ENST00000427487 SLC4A3P48751 1232 aa13.88□□□□□ -0.19
HDLBP-215ENST00000427487 SAFBQ15424 915 aaKnown RBP eCLIP13.88□□□□□ -0.19
HDLBP-215ENST00000427487 WWC2Q6AWC2 1192 aa13.88□□□□□ -0.19
HDLBP-215ENST00000427487 HOMER1Q86YM7 354 aa13.88□□□□□ -0.19
HDLBP-215ENST00000427487 P2RX7Q99572 595 aaKnown RBP13.88□□□□□ -0.19
HDLBP-215ENST00000427487 CFHR5Q9BXR6 569 aa13.88□□□□□ -0.19
HDLBP-215ENST00000427487 BRMS1Q9HCU9 246 aa13.88□□□□□ -0.19
HDLBP-215ENST00000427487 MORF4L1Q9UBU8 362 aa13.88□□□□□ -0.19
HDLBP-215ENST00000427487 PCDHA1Q9Y5I3 950 aa13.88□□□□□ -0.19
HDLBP-215ENST00000427487 THSD7BQ9C0I4 1608 aa13.88□□□□□ -0.19
HDLBP-215ENST00000427487 H3BQV1 296 aa13.87□□□□□ -0.19
HDLBP-215ENST00000427487 PIK3CDO00329 1044 aa13.87□□□□□ -0.19
HDLBP-215ENST00000427487 PPP1R11O60927 126 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-215ENST00000427487 BRD1O95696 1058 aa13.87□□□□□ -0.19
HDLBP-215ENST00000427487 MMP1P03956 469 aa13.87□□□□□ -0.19
HDLBP-215ENST00000427487 MRPL12P52815 198 aaKnown RBP13.87□□□□□ -0.19
HDLBP-215ENST00000427487 IFFO2Q5TF58 517 aa13.87□□□□□ -0.19
HDLBP-215ENST00000427487 KRT40Q6A162 431 aa13.87□□□□□ -0.19
HDLBP-215ENST00000427487 CYP4F22Q6NT55 531 aa13.87□□□□□ -0.19
HDLBP-215ENST00000427487 HEATR3Q7Z4Q2 680 aa13.87□□□□□ -0.19
HDLBP-215ENST00000427487 MCF2L2Q86YR7 1114 aa13.87□□□□□ -0.19
HDLBP-215ENST00000427487 RIOX2Q8IUF8 465 aa13.87□□□□□ -0.19
HDLBP-215ENST00000427487 FAM43AQ8N2R8 423 aa13.87□□□□□ -0.19
HDLBP-215ENST00000427487 SHCBP1Q8NEM2 672 aa13.87□□□□□ -0.19
HDLBP-215ENST00000427487 CHST13Q8NET6 341 aa13.87□□□□□ -0.19
HDLBP-215ENST00000427487 FOXP1Q9H334 677 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-215ENST00000427487 ZSCAN16Q9H4T2 348 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-215ENST00000427487 C6orf50Q9HD87 102 aa13.87□□□□□ -0.19
HDLBP-215ENST00000427487 CHMP5Q9NZZ3 219 aa13.87□□□□□ -0.19
HDLBP-215ENST00000427487 FBXO40Q9UH90 709 aa13.87□□□□□ -0.19
HDLBP-215ENST00000427487 IGF2BP3O00425 579 aaKnown RBP eCLIP13.86□□□□□ -0.19
HDLBP-215ENST00000427487 HSPA6P17066 643 aa13.86□□□□□ -0.19
HDLBP-215ENST00000427487 U2AF2P26368 475 aaKnown RBP eCLIP13.86□□□□□ -0.192e-8■□□□□ 10.7
HDLBP-215ENST00000427487 STAT3P40763 770 aa13.86□□□□□ -0.19
HDLBP-215ENST00000427487 NAPAP54920 295 aa13.86□□□□□ -0.19
HDLBP-215ENST00000427487 CCNA1P78396 465 aa13.86□□□□□ -0.19
HDLBP-215ENST00000427487 TMEM132BQ14DG7 1078 aa13.86□□□□□ -0.19
HDLBP-215ENST00000427487 FAM110CQ1W6H9 321 aa13.86□□□□□ -0.19
HDLBP-215ENST00000427487 SMCR8Q8TEV9 937 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-215ENST00000427487 SPATC1LQ9H0A9 340 aa13.86□□□□□ -0.19
HDLBP-215ENST00000427487 RIC8AQ9NPQ8 531 aa13.86□□□□□ -0.19
HDLBP-215ENST00000427487 FOXD4L1Q9NU39 408 aa13.86□□□□□ -0.19
HDLBP-215ENST00000427487 VPS54Q9P1Q0 977 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms