RNA–Protein interactions for RNA: ENST00000427332.6

HDAC7-209, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HDAC7, Length 3,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-209ENST00000427332 ZFP91Q96JP5 570 aaPredicted RBP16.16■□□□□ 0.18
HDAC7-209ENST00000427332 TMEM60Q9H2L4 133 aa16.16■□□□□ 0.18
HDAC7-209ENST00000427332 PPP6R2O75170 966 aa16.16■□□□□ 0.18
HDAC7-209ENST00000427332 SNHG28P0DPA3 235 aa16.16■□□□□ 0.18
HDAC7-209ENST00000427332 CDC37Q16543 378 aaPredicted RBP16.16■□□□□ 0.18
HDAC7-209ENST00000427332 CNNM3Q8NE01 707 aa16.16■□□□□ 0.18
HDAC7-209ENST00000427332 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.16■□□□□ 0.18
HDAC7-209ENST00000427332 GGA3Q9NZ52 723 aa16.16■□□□□ 0.18
HDAC7-209ENST00000427332 HERC5Q9UII4 1024 aaKnown RBP16.16■□□□□ 0.18
HDAC7-209ENST00000427332 PCDHA1Q9Y5I3 950 aa16.16■□□□□ 0.18
HDAC7-209ENST00000427332 ATRNL1Q5VV63 1379 aa16.16■□□□□ 0.18
HDAC7-209ENST00000427332 PTPREP23469 700 aa16.16■□□□□ 0.18
HDAC7-209ENST00000427332 NOVP48745 357 aa16.16■□□□□ 0.18
HDAC7-209ENST00000427332 REXO1Q8N1G1 1221 aaKnown RBP16.16■□□□□ 0.18
HDAC7-209ENST00000427332 RASSF8Q8NHQ8 419 aa16.16■□□□□ 0.18
HDAC7-209ENST00000427332 TBCKQ8TEA7 893 aa16.16■□□□□ 0.18
HDAC7-209ENST00000427332 SYMPKQ92797 1274 aaKnown RBP16.16■□□□□ 0.18
HDAC7-209ENST00000427332 ZNF341Q9BYN7 854 aa16.16■□□□□ 0.18
HDAC7-209ENST00000427332 C6orf50Q9HD87 102 aa16.16■□□□□ 0.18
HDAC7-209ENST00000427332 NYAP2Q9P242 653 aa16.16■□□□□ 0.18
HDAC7-209ENST00000427332 CENPFP49454 3210 aa16.16■□□□□ 0.18
HDAC7-209ENST00000427332 A0A087X0B3 334 aa16.15■□□□□ 0.18
HDAC7-209ENST00000427332 CUTAO60888 179 aa16.15■□□□□ 0.18
HDAC7-209ENST00000427332 ZNF165P49910 485 aa16.15■□□□□ 0.18
HDAC7-209ENST00000427332 GPATCH4Q5T3I0 446 aaKnown RBP16.15■□□□□ 0.18
HDAC7-209ENST00000427332 VPS33BQ9H267 617 aa16.15■□□□□ 0.18
HDAC7-209ENST00000427332 SERTAD1Q9UHV2 236 aa16.15■□□□□ 0.18
HDAC7-209ENST00000427332 FOCADQ5VW36 1801 aa16.15■□□□□ 0.18
HDAC7-209ENST00000427332 BMP3P12645 472 aa16.14■□□□□ 0.17
HDAC7-209ENST00000427332 LMNB1P20700 586 aa16.14■□□□□ 0.17
HDAC7-209ENST00000427332 HOXA13P31271 388 aaPredicted RBP16.14■□□□□ 0.17
HDAC7-209ENST00000427332 IL17AQ16552 155 aa16.14■□□□□ 0.17
HDAC7-209ENST00000427332 RESP18Q5W5W9 173 aa16.14■□□□□ 0.17
HDAC7-209ENST00000427332 ZMYND12Q9H0C1 365 aa16.14■□□□□ 0.17
HDAC7-209ENST00000427332 CEP131Q9UPN4 1083 aa16.14■□□□□ 0.17
HDAC7-209ENST00000427332 PNMA6FA0A0J9YX94 578 aa16.14■□□□□ 0.17
HDAC7-209ENST00000427332 ZBTB5O15062 677 aa16.14■□□□□ 0.17
HDAC7-209ENST00000427332 CAP2P40123 477 aa16.14■□□□□ 0.17
HDAC7-209ENST00000427332 HSP90AA4PQ58FG1 418 aa16.14■□□□□ 0.17
HDAC7-209ENST00000427332 CBX8Q9HC52 389 aa16.14■□□□□ 0.17
HDAC7-209ENST00000427332 SIPA1L1O43166 1804 aa16.14■□□□□ 0.17
HDAC7-209ENST00000427332 ADCY7P51828 1080 aa16.13■□□□□ 0.17
HDAC7-209ENST00000427332 HIRAP54198 1017 aaPredicted RBP16.13■□□□□ 0.17
HDAC7-209ENST00000427332 DPCR1Q3MIW9 517 aa16.13■□□□□ 0.17
HDAC7-209ENST00000427332 NPM3O75607 178 aaKnown RBP16.13■□□□□ 0.17
HDAC7-209ENST00000427332 GNA11P29992 359 aa16.13■□□□□ 0.17
HDAC7-209ENST00000427332 FAM43AQ8N2R8 423 aa16.13■□□□□ 0.17
HDAC7-209ENST00000427332 ZBED3Q96IU2 234 aaPredicted RBP16.13■□□□□ 0.17
HDAC7-209ENST00000427332 TEPSINQ96N21 525 aa16.13■□□□□ 0.17
HDAC7-209ENST00000427332 ARHGEF10LQ9HCE6 1279 aa16.13■□□□□ 0.17
HDAC7-209ENST00000427332 FAM13BQ9NYF5 915 aa16.13■□□□□ 0.17
HDAC7-209ENST00000427332 SRPRBQ9Y5M8 271 aaKnown RBP16.13■□□□□ 0.17
HDAC7-209ENST00000427332 PRR29P0C7W0 189 aa16.13■□□□□ 0.17
HDAC7-209ENST00000427332 PSTPIP2Q9H939 334 aa16.13■□□□□ 0.17
HDAC7-209ENST00000427332 ZNF646O15015 1829 aaPredicted RBP16.12■□□□□ 0.17
HDAC7-209ENST00000427332 MYH15Q9Y2K3 1946 aa16.12■□□□□ 0.17
HDAC7-209ENST00000427332 AP5Z1O43299 807 aa16.12■□□□□ 0.17
HDAC7-209ENST00000427332 TDP2O95551 362 aa16.12■□□□□ 0.17
HDAC7-209ENST00000427332 ZNF280AP59817 542 aaPredicted RBP16.12■□□□□ 0.17
HDAC7-209ENST00000427332 DHX8Q14562 1220 aaKnown RBP16.12■□□□□ 0.17
HDAC7-209ENST00000427332 NONOQ15233 471 aaKnown RBP eCLIP16.12■□□□□ 0.174e-7■■■□□ 17.1
HDAC7-209ENST00000427332 CCDC12Q8WUD4 166 aaPredicted RBP16.12■□□□□ 0.17
HDAC7-209ENST00000427332 KIF13BQ9NQT8 1826 aa16.12■□□□□ 0.17
HDAC7-209ENST00000427332 SH3GLB2Q9NR46 395 aa16.12■□□□□ 0.17
HDAC7-209ENST00000427332 FER1L6Q2WGJ9 1857 aa16.12■□□□□ 0.17
HDAC7-209ENST00000427332 UBXN2AP68543 259 aa16.12■□□□□ 0.17
HDAC7-209ENST00000427332 FAM83AQ86UY5 434 aa16.12■□□□□ 0.17
HDAC7-209ENST00000427332 FCHSD1Q86WN1 690 aa16.12■□□□□ 0.17
HDAC7-209ENST00000427332 CPXCR1Q8N123 301 aa16.12■□□□□ 0.17
HDAC7-209ENST00000427332 SPC24Q8NBT2 197 aa16.12■□□□□ 0.17
HDAC7-209ENST00000427332 TRIM44Q96DX7 344 aaPredicted RBP16.12■□□□□ 0.17
HDAC7-209ENST00000427332 KIAA1468Q9P260 1216 aa16.12■□□□□ 0.17
HDAC7-209ENST00000427332 MYH4Q9Y623 1939 aa16.12■□□□□ 0.17
HDAC7-209ENST00000427332 SMCHD1A6NHR9 2005 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 M0R2N6 131 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 NT5C2P49902 561 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 TNFAIP1Q13829 316 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 METTL16Q86W50 562 aaKnown RBP16.11■□□□□ 0.17
HDAC7-209ENST00000427332 TBC1D5Q92609 795 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 MKL1Q969V6 931 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 WRNIP1Q96S55 665 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 HOMER2Q9NSB8 354 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 GPRC5DQ9NZD1 345 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 TXKP42681 527 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 KARSQ15046 597 aaKnown RBP16.11■□□□□ 0.17
HDAC7-209ENST00000427332 SYDE2Q5VT97 1194 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 C9orf131Q5VYM1 1079 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 POTEDQ86YR6 584 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 MTMR14Q8NCE2 650 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 PRR12Q9ULL5 1215 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 HPSEQ9Y251 543 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 RPS12P25398 132 aaKnown RBP16.11■□□□□ 0.17
HDAC7-209ENST00000427332 TECP42680 631 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 GPR162Q16538 588 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 DPF2Q92785 391 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 BLZF1Q9H2G9 400 aa16.11■□□□□ 0.17
HDAC7-209ENST00000427332 STAT2P52630 851 aa16.1■□□□□ 0.17
HDAC7-209ENST00000427332 ATP2C1P98194 919 aaPredicted RBP16.1■□□□□ 0.17
HDAC7-209ENST00000427332 SPP2Q13103 211 aa16.1■□□□□ 0.17
HDAC7-209ENST00000427332 SLC30A10Q6XR72 485 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms