RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 MEIS1O00470 390 aa7.92□□□□□ -1.14
LINC00458-202ENST00000427299 TNFRSF10CO14798 259 aa7.92□□□□□ -1.14
LINC00458-202ENST00000427299 NME1P15531 152 aaKnown RBP7.92□□□□□ -1.14
LINC00458-202ENST00000427299 KRTAP10-2P60368 255 aa7.92□□□□□ -1.14
LINC00458-202ENST00000427299 CBX2Q14781 532 aaPredicted RBP7.92□□□□□ -1.14
LINC00458-202ENST00000427299 RAB3GAP1Q15042 981 aa7.92□□□□□ -1.14
LINC00458-202ENST00000427299 VMACQ2NL98 169 aa7.92□□□□□ -1.14
LINC00458-202ENST00000427299 SKOR2Q2VWA4 1001 aaPredicted RBP7.92□□□□□ -1.14
LINC00458-202ENST00000427299 SEZ6Q53EL9 994 aa7.92□□□□□ -1.14
LINC00458-202ENST00000427299 GK5Q6ZS86 529 aa7.92□□□□□ -1.14
LINC00458-202ENST00000427299 SLC6A18Q96N87 628 aa7.92□□□□□ -1.14
LINC00458-202ENST00000427299 CDADC1Q9BWV3 514 aa7.92□□□□□ -1.14
LINC00458-202ENST00000427299 MKRN2Q9H000 416 aaKnown RBP7.92□□□□□ -1.14
LINC00458-202ENST00000427299 PRR13Q9NZ81 148 aa7.92□□□□□ -1.14
LINC00458-202ENST00000427299 PCDHB12Q9Y5F1 795 aa7.92□□□□□ -1.14
LINC00458-202ENST00000427299 VAV1P15498 845 aa7.91□□□□□ -1.14
LINC00458-202ENST00000427299 CYP4F8P98187 520 aa7.91□□□□□ -1.14
LINC00458-202ENST00000427299 TMEM62Q0P6H9 643 aa7.91□□□□□ -1.14
LINC00458-202ENST00000427299 CRTC3Q6UUV7 619 aa7.91□□□□□ -1.14
LINC00458-202ENST00000427299 SP8Q8IXZ3 490 aa7.91□□□□□ -1.14
LINC00458-202ENST00000427299 NUDT19A8MXV4 375 aa7.9□□□□□ -1.14
LINC00458-202ENST00000427299 ERCC3P19447 782 aa7.9□□□□□ -1.14
LINC00458-202ENST00000427299 AUHQ13825 339 aaKnown RBP7.9□□□□□ -1.14
LINC00458-202ENST00000427299 LRRFIP1Q32MZ4 808 aaKnown RBP7.9□□□□□ -1.14
LINC00458-202ENST00000427299 RPTNQ6XPR3 784 aa7.9□□□□□ -1.14
LINC00458-202ENST00000427299 LINC01356Q8N9X3 169 aa7.9□□□□□ -1.14
LINC00458-202ENST00000427299 SYT8Q8NBV8 401 aa7.9□□□□□ -1.14
LINC00458-202ENST00000427299 TMEM52Q8NDY8 209 aa7.9□□□□□ -1.14
LINC00458-202ENST00000427299 NUP43Q8NFH3 380 aa7.9□□□□□ -1.14
LINC00458-202ENST00000427299 JMJD8Q96S16 334 aa7.9□□□□□ -1.14
LINC00458-202ENST00000427299 LUC7LQ9NQ29 371 aaKnown RBP7.9□□□□□ -1.14
LINC00458-202ENST00000427299 AP5S1Q9NUS5 200 aa7.9□□□□□ -1.14
LINC00458-202ENST00000427299 APOBRQ0VD83 1088 aa7.89□□□□□ -1.15
LINC00458-202ENST00000427299 RTP2Q5QGT7 225 aa7.89□□□□□ -1.15
LINC00458-202ENST00000427299 PWWP2AQ96N64 755 aa7.89□□□□□ -1.15
LINC00458-202ENST00000427299 SLC9A7Q96T83 725 aa7.89□□□□□ -1.15
LINC00458-202ENST00000427299 IMPACTQ9P2X3 320 aa7.89□□□□□ -1.15
LINC00458-202ENST00000427299 GGT7Q9UJ14 662 aa7.89□□□□□ -1.15
LINC00458-202ENST00000427299 FBXL21Q9UKT6 434 aa7.89□□□□□ -1.15
LINC00458-202ENST00000427299 SHOXO15266 292 aa7.88□□□□□ -1.15
LINC00458-202ENST00000427299 ZNF165P49910 485 aa7.88□□□□□ -1.15
LINC00458-202ENST00000427299 PLEKHN1Q494U1 663 aaPredicted RBP7.88□□□□□ -1.15
LINC00458-202ENST00000427299 HS2ST1Q7LGA3 356 aa7.88□□□□□ -1.15
LINC00458-202ENST00000427299 TP53I13Q8NBR0 393 aaPredicted RBP7.88□□□□□ -1.15
LINC00458-202ENST00000427299 IRS2Q9Y4H2 1338 aa7.87□□□□□ -1.15
LINC00458-202ENST00000427299 BUB1BO60566 1050 aaPredicted RBP7.87□□□□□ -1.15
LINC00458-202ENST00000427299 IGFBP6P24592 240 aaPredicted RBP7.87□□□□□ -1.15
LINC00458-202ENST00000427299 MCM4P33991 863 aa7.87□□□□□ -1.15
LINC00458-202ENST00000427299 NCKAP1LP55160 1127 aa7.87□□□□□ -1.15
LINC00458-202ENST00000427299 SLITRK4Q8IW52 837 aa7.87□□□□□ -1.15
LINC00458-202ENST00000427299 ZDHHC14Q8IZN3 488 aa7.87□□□□□ -1.15
LINC00458-202ENST00000427299 SUCOQ9UBS9 1254 aaKnown RBP7.87□□□□□ -1.15
LINC00458-202ENST00000427299 GSNP06396 782 aa7.86□□□□□ -1.15
LINC00458-202ENST00000427299 CELA3BP08861 270 aa7.86□□□□□ -1.15
LINC00458-202ENST00000427299 MAPKAPK2P49137 400 aa7.86□□□□□ -1.15
LINC00458-202ENST00000427299 NFKB2Q00653 900 aa7.86□□□□□ -1.15
LINC00458-202ENST00000427299 MVKQ03426 396 aa7.86□□□□□ -1.15
LINC00458-202ENST00000427299 MRPL58Q14197 206 aaKnown RBP7.86□□□□□ -1.15
LINC00458-202ENST00000427299 DBX2Q6ZNG2 339 aa7.86□□□□□ -1.15
LINC00458-202ENST00000427299 NPM2Q86SE8 214 aaKnown RBP7.86□□□□□ -1.15
LINC00458-202ENST00000427299 TEPSINQ96N21 525 aa7.86□□□□□ -1.15
LINC00458-202ENST00000427299 NT5C1AQ9BXI3 368 aa7.86□□□□□ -1.15
LINC00458-202ENST00000427299 SLC12A9Q9BXP2 914 aa7.86□□□□□ -1.15
LINC00458-202ENST00000427299 MSL3P1P0C860 447 aa7.85□□□□□ -1.15
LINC00458-202ENST00000427299 ACRP10323 421 aa7.85□□□□□ -1.15
LINC00458-202ENST00000427299 CAP1Q01518 475 aa7.85□□□□□ -1.15
LINC00458-202ENST00000427299 PRRT2Q7Z6L0 340 aaPredicted RBP7.85□□□□□ -1.15
LINC00458-202ENST00000427299 EAF1Q96JC9 268 aaPredicted RBP7.85□□□□□ -1.15
LINC00458-202ENST00000427299 ADAM7Q9H2U9 754 aa7.85□□□□□ -1.15
LINC00458-202ENST00000427299 ZC3H12DA2A288 527 aaKnown RBP7.84□□□□□ -1.15
LINC00458-202ENST00000427299 C9IYK1 514 aa7.84□□□□□ -1.15
LINC00458-202ENST00000427299 FFAR3O14843 346 aa7.84□□□□□ -1.15
LINC00458-202ENST00000427299 FBLN1P23142 703 aa7.84□□□□□ -1.15
LINC00458-202ENST00000427299 NR1I3Q14994 352 aa7.84□□□□□ -1.15
LINC00458-202ENST00000427299 INTS3Q68E01 1043 aaKnown RBP7.84□□□□□ -1.15
LINC00458-202ENST00000427299 ZC3H14Q6PJT7 736 aaKnown RBP7.84□□□□□ -1.15
LINC00458-202ENST00000427299 FRMD5Q7Z6J6 570 aa7.84□□□□□ -1.15
LINC00458-202ENST00000427299 C7orf61Q8IZ16 206 aa7.84□□□□□ -1.15
LINC00458-202ENST00000427299 NKD1Q969G9 470 aa7.84□□□□□ -1.15
LINC00458-202ENST00000427299 DHRS1Q96LJ7 313 aa7.84□□□□□ -1.15
LINC00458-202ENST00000427299 SRRTQ9BXP5 876 aaKnown RBP7.84□□□□□ -1.15
LINC00458-202ENST00000427299 SCRIBQ14160 1630 aa7.84□□□□□ -1.15
LINC00458-202ENST00000427299 ZNF200P98182 395 aaPredicted RBP7.83□□□□□ -1.16
LINC00458-202ENST00000427299 ERICH6BQ5W0A0 696 aa7.83□□□□□ -1.16
LINC00458-202ENST00000427299 DSCC1Q9BVC3 393 aa7.83□□□□□ -1.16
LINC00458-202ENST00000427299 NACADO15069 1562 aa7.83□□□□□ -1.16
LINC00458-202ENST00000427299 SRGAP3O43295 1099 aa7.82□□□□□ -1.16
LINC00458-202ENST00000427299 GSTM1P09488 218 aa7.82□□□□□ -1.16
LINC00458-202ENST00000427299 LIMS1P48059 325 aa7.82□□□□□ -1.16
LINC00458-202ENST00000427299 NAT16Q8N8M0 369 aa7.82□□□□□ -1.16
LINC00458-202ENST00000427299 ZNRF3Q9ULT6 936 aa7.82□□□□□ -1.16
LINC00458-202ENST00000427299 FAM86C2PA6NEL3 165 aa7.81□□□□□ -1.16
LINC00458-202ENST00000427299 H0Y8X5 98 aa7.81□□□□□ -1.16
LINC00458-202ENST00000427299 CYBBP04839 570 aa7.81□□□□□ -1.16
LINC00458-202ENST00000427299 DBHP09172 617 aa7.81□□□□□ -1.16
LINC00458-202ENST00000427299 PMS1P54277 932 aaKnown RBP7.81□□□□□ -1.16
LINC00458-202ENST00000427299 HLA-DQA1Q5Y7H0 255 aa7.81□□□□□ -1.16
LINC00458-202ENST00000427299 PPFIBP1Q86W92 1011 aa7.81□□□□□ -1.16
LINC00458-202ENST00000427299 CCDC144CPQ8IYA2 1237 aa7.81□□□□□ -1.16
LINC00458-202ENST00000427299 RB1CC1Q8TDY2 1594 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms