RNA–Protein interactions for RNA: ENST00000427214.5

DDX39B-207, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-207ENST00000427214 FOXC1Q12948 553 aa7.98□□□□□ -1.13
DDX39B-207ENST00000427214 PRPF38BQ5VTL8 546 aaKnown RBP7.98□□□□□ -1.13
DDX39B-207ENST00000427214 B4GALNT3Q6L9W6 998 aa7.98□□□□□ -1.13
DDX39B-207ENST00000427214 GIMAP6Q6P9H5 292 aa7.98□□□□□ -1.13
DDX39B-207ENST00000427214 LBX2Q6XYB7 198 aa7.98□□□□□ -1.13
DDX39B-207ENST00000427214 CCDC129Q6ZRS4 1044 aa7.98□□□□□ -1.13
DDX39B-207ENST00000427214 GPR142Q7Z601 462 aa7.98□□□□□ -1.13
DDX39B-207ENST00000427214 SMC5Q8IY18 1101 aa7.98□□□□□ -1.13
DDX39B-207ENST00000427214 AMOTL1Q8IY63 956 aa7.98□□□□□ -1.13
DDX39B-207ENST00000427214 IFNL3Q8IZI9 196 aa7.98□□□□□ -1.13
DDX39B-207ENST00000427214 SPICE1Q8N0Z3 855 aa7.98□□□□□ -1.13
DDX39B-207ENST00000427214 U2AF1L4Q8WU68 220 aaKnown RBP7.98□□□□□ -1.13
DDX39B-207ENST00000427214 GTF3C2Q8WUA4 911 aaPredicted RBP7.98□□□□□ -1.13
DDX39B-207ENST00000427214 TRIB2Q92519 343 aa7.98□□□□□ -1.13
DDX39B-207ENST00000427214 USP6NLQ92738 828 aa7.98□□□□□ -1.13
DDX39B-207ENST00000427214 LNPKQ9C0E8 428 aa7.98□□□□□ -1.13
DDX39B-207ENST00000427214 VCPKMTQ9H867 229 aa7.98□□□□□ -1.13
DDX39B-207ENST00000427214 TMX2Q9Y320 296 aa7.98□□□□□ -1.13
DDX39B-207ENST00000427214 RABGAP1Q9Y3P9 1069 aa7.98□□□□□ -1.13
DDX39B-207ENST00000427214 PLXNB2O15031 1838 aa7.98□□□□□ -1.13
DDX39B-207ENST00000427214 ROBO3Q96MS0 1386 aa7.97□□□□□ -1.13
DDX39B-207ENST00000427214 PATL2C9JE40 543 aaKnown RBP7.97□□□□□ -1.13
DDX39B-207ENST00000427214 KDM4AO75164 1064 aa7.97□□□□□ -1.13
DDX39B-207ENST00000427214 PRDM1O75626 825 aa7.97□□□□□ -1.13
DDX39B-207ENST00000427214 SGPL1O95470 568 aa7.97□□□□□ -1.13
DDX39B-207ENST00000427214 APPP05067 770 aa7.97□□□□□ -1.13
DDX39B-207ENST00000427214 GNAT2P19087 354 aa7.97□□□□□ -1.13
DDX39B-207ENST00000427214 RASA1P20936 1047 aa7.97□□□□□ -1.13
DDX39B-207ENST00000427214 MAPK4P31152 587 aa7.97□□□□□ -1.13
DDX39B-207ENST00000427214 TDO2P48775 406 aa7.97□□□□□ -1.13
DDX39B-207ENST00000427214 ATP2B2Q01814 1243 aa7.97□□□□□ -1.13
DDX39B-207ENST00000427214 COG2Q14746 738 aa7.97□□□□□ -1.13
DDX39B-207ENST00000427214 CCL14Q16627 93 aa7.97□□□□□ -1.13
DDX39B-207ENST00000427214 PLEKHH3Q7Z736 793 aa7.97□□□□□ -1.13
DDX39B-207ENST00000427214 UBE2Q1Q7Z7E8 422 aa7.97□□□□□ -1.13
DDX39B-207ENST00000427214 DEFB118Q96PH6 123 aa7.97□□□□□ -1.13
DDX39B-207ENST00000427214 TANGO6Q9C0B7 1094 aa7.97□□□□□ -1.13
DDX39B-207ENST00000427214 ARHGEF10LQ9HCE6 1279 aa7.97□□□□□ -1.13
DDX39B-207ENST00000427214 PAK6Q9NQU5 681 aaPredicted RBP7.97□□□□□ -1.13
DDX39B-207ENST00000427214 FBXO28Q9NVF7 368 aa7.97□□□□□ -1.13
DDX39B-207ENST00000427214 SUPT16HQ9Y5B9 1047 aaKnown RBP7.97□□□□□ -1.13
DDX39B-207ENST00000427214 IGKV6D-41A0A0C4DH26 115 aa7.96□□□□□ -1.14
DDX39B-207ENST00000427214 HMGCRP04035 888 aa7.96□□□□□ -1.14
DDX39B-207ENST00000427214 XRCC5P13010 732 aaKnown RBP7.96□□□□□ -1.14
DDX39B-207ENST00000427214 AAMPQ13685 434 aa7.96□□□□□ -1.14
DDX39B-207ENST00000427214 LRRFIP1Q32MZ4 808 aaKnown RBP7.96□□□□□ -1.14
DDX39B-207ENST00000427214 MAP3K21Q5TCX8 1036 aa7.96□□□□□ -1.14
DDX39B-207ENST00000427214 VPS53Q5VIR6 699 aa7.96□□□□□ -1.14
DDX39B-207ENST00000427214 CCAR1Q8IX12 1150 aaKnown RBP7.96□□□□□ -1.14
DDX39B-207ENST00000427214 SOCS4Q8WXH5 440 aa7.96□□□□□ -1.14
DDX39B-207ENST00000427214 LPAR1Q92633 364 aa7.96□□□□□ -1.14
DDX39B-207ENST00000427214 ATG4CQ96DT6 458 aa7.96□□□□□ -1.14
DDX39B-207ENST00000427214 NUP88Q99567 741 aaPredicted RBP7.96□□□□□ -1.14
DDX39B-207ENST00000427214 NUDT12Q9BQG2 462 aa7.96□□□□□ -1.14
DDX39B-207ENST00000427214 MOV10L1Q9BXT6 1211 aaKnown RBP7.96□□□□□ -1.14
DDX39B-207ENST00000427214 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.96□□□□□ -1.14
DDX39B-207ENST00000427214 RWDD1Q9H446 243 aaPredicted RBP7.96□□□□□ -1.14
DDX39B-207ENST00000427214 SH2D4AQ9H788 454 aa7.96□□□□□ -1.14
DDX39B-207ENST00000427214 KANSL2Q9H9L4 492 aa7.96□□□□□ -1.14
DDX39B-207ENST00000427214 MKNK2Q9HBH9 465 aa7.96□□□□□ -1.14
DDX39B-207ENST00000427214 MYH8P13535 1937 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 RLFQ13129 1914 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 A0A0D9SFI3 127 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 WDR46O15213 610 aaKnown RBP7.95□□□□□ -1.14
DDX39B-207ENST00000427214 FLOT1O75955 427 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 FARP2O94887 1054 aaPredicted RBP7.95□□□□□ -1.14
DDX39B-207ENST00000427214 TFRCP02786 760 aaKnown RBP7.95□□□□□ -1.14
DDX39B-207ENST00000427214 RGS2P41220 211 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 CCNA1P78396 465 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 IRX6P78412 446 aaPredicted RBP7.95□□□□□ -1.14
DDX39B-207ENST00000427214 NUCB1Q02818 461 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 PPARAQ07869 468 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 GRB14Q14449 540 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 WDR78Q5VTH9 848 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 CHD1LQ86WJ1 897 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 PLEKHM2Q8IWE5 1019 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 NPLOC4Q8TAT6 608 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 EVI5LQ96CN4 794 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 CEP95Q96GE4 821 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 FAM227BQ96M60 508 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 NACAP1Q9BZK3 213 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 SPATC1LQ9H0A9 340 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 NAPBQ9H115 298 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 INCENPQ9NQS7 918 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 HOXC10Q9NYD6 342 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 FLRT1Q9NZU1 646 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 TACC3Q9Y6A5 838 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 RPTORQ8N122 1335 aa7.95□□□□□ -1.14
DDX39B-207ENST00000427214 GREB1LQ9C091 1923 aaPredicted RBP7.95□□□□□ -1.14
DDX39B-207ENST00000427214 SLC15A5A6NIM6 579 aa7.94□□□□□ -1.14
DDX39B-207ENST00000427214 F5H6K3 240 aa7.94□□□□□ -1.14
DDX39B-207ENST00000427214 ZBTB24O43167 697 aaPredicted RBP7.94□□□□□ -1.14
DDX39B-207ENST00000427214 RAD21O60216 631 aa7.94□□□□□ -1.14
DDX39B-207ENST00000427214 NDUFB10O96000 172 aa7.94□□□□□ -1.14
DDX39B-207ENST00000427214 ZKSCAN1P17029 563 aaPredicted RBP7.94□□□□□ -1.14
DDX39B-207ENST00000427214 ERCC3P19447 782 aa7.94□□□□□ -1.14
DDX39B-207ENST00000427214 CCND3P30281 292 aaPredicted RBP7.94□□□□□ -1.14
DDX39B-207ENST00000427214 MMP16P51512 607 aa7.94□□□□□ -1.14
DDX39B-207ENST00000427214 USP46P62068 366 aa7.94□□□□□ -1.14
DDX39B-207ENST00000427214 CTDSPL2Q05D32 466 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms