RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 PNMA1Q8ND90 353 aa17.87■□□□□ 0.45
PKP4-205ENST00000426248 CCDC148Q8NFR7 591 aa17.87■□□□□ 0.45
PKP4-205ENST00000426248 SCAF8Q9UPN6 1271 aaKnown RBP17.87■□□□□ 0.45
PKP4-205ENST00000426248 CALM1P0DP23 149 aa17.87■□□□□ 0.45
PKP4-205ENST00000426248 CALM2P0DP24 149 aa17.87■□□□□ 0.45
PKP4-205ENST00000426248 CALM3P0DP25 149 aa17.87■□□□□ 0.45
PKP4-205ENST00000426248 NEDD9Q14511 834 aa17.87■□□□□ 0.45
PKP4-205ENST00000426248 SUGP1Q8IWZ8 645 aaKnown RBP17.87■□□□□ 0.45
PKP4-205ENST00000426248 LRRC47Q8N1G4 583 aaKnown RBP17.87■□□□□ 0.45
PKP4-205ENST00000426248 STAG1Q8WVM7 1258 aa17.87■□□□□ 0.45
PKP4-205ENST00000426248 ZMYND10O75800 440 aa17.87■□□□□ 0.45
PKP4-205ENST00000426248 ANTXR2P58335 489 aa17.87■□□□□ 0.45
PKP4-205ENST00000426248 ACTN3Q08043 901 aaPredicted RBP17.87■□□□□ 0.45
PKP4-205ENST00000426248 HOOK1Q9UJC3 728 aaKnown RBP17.87■□□□□ 0.45
PKP4-205ENST00000426248 GOLGA6CA6NDK9 693 aa17.86■□□□□ 0.45
PKP4-205ENST00000426248 CCDC175P0C221 793 aa17.86■□□□□ 0.45
PKP4-205ENST00000426248 GOLGA6DP0CG33 693 aa17.86■□□□□ 0.45
PKP4-205ENST00000426248 NAIF1Q69YI7 327 aaPredicted RBP17.86■□□□□ 0.45
PKP4-205ENST00000426248 SRGAP1Q7Z6B7 1085 aa17.86■□□□□ 0.45
PKP4-205ENST00000426248 JMYQ8N9B5 988 aa17.86■□□□□ 0.45
PKP4-205ENST00000426248 MED4Q9NPJ6 270 aa17.86■□□□□ 0.45
PKP4-205ENST00000426248 GOLGA6AQ9NYA3 693 aa17.86■□□□□ 0.45
PKP4-205ENST00000426248 BTAF1O14981 1849 aa17.86■□□□□ 0.45
PKP4-205ENST00000426248 RPSAP08865 295 aaKnown RBP17.86■□□□□ 0.45
PKP4-205ENST00000426248 CABS1Q96KC9 395 aa17.86■□□□□ 0.45
PKP4-205ENST00000426248 SERPINB13Q9UIV8 391 aa17.86■□□□□ 0.45
PKP4-205ENST00000426248 CTAGE9A4FU28 777 aa17.86■□□□□ 0.45
PKP4-205ENST00000426248 KIRREL3Q8IZU9 778 aa17.86■□□□□ 0.45
PKP4-205ENST00000426248 VPS54Q9P1Q0 977 aa17.86■□□□□ 0.45
PKP4-205ENST00000426248 MRFAP1Q9Y605 127 aa17.86■□□□□ 0.45
PKP4-205ENST00000426248 GCKP35557 465 aa17.85■□□□□ 0.45
PKP4-205ENST00000426248 PLCD1P51178 756 aa17.85■□□□□ 0.45
PKP4-205ENST00000426248 PRKG1Q13976 671 aa17.85■□□□□ 0.45
PKP4-205ENST00000426248 KRT40Q6A162 431 aa17.85■□□□□ 0.45
PKP4-205ENST00000426248 CAPZA3Q96KX2 299 aa17.85■□□□□ 0.45
PKP4-205ENST00000426248 CALR3Q96L12 384 aaKnown RBP17.85■□□□□ 0.45
PKP4-205ENST00000426248 CD248Q9HCU0 757 aa17.85■□□□□ 0.45
PKP4-205ENST00000426248 CDK8P49336 464 aa17.85■□□□□ 0.45
PKP4-205ENST00000426248 GNGT1P63211 74 aa17.85■□□□□ 0.45
PKP4-205ENST00000426248 E2F5Q15329 346 aa17.85■□□□□ 0.45
PKP4-205ENST00000426248 MAP9Q49MG5 647 aa17.85■□□□□ 0.45
PKP4-205ENST00000426248 TOGARAM2Q6ZUX3 1019 aa17.85■□□□□ 0.45
PKP4-205ENST00000426248 PLCD4Q9BRC7 762 aa17.85■□□□□ 0.45
PKP4-205ENST00000426248 ZMYM6O95789 1325 aa17.85■□□□□ 0.45
PKP4-205ENST00000426248 LONRF3Q496Y0 759 aa17.84■□□□□ 0.45
PKP4-205ENST00000426248 IQUBQ8NA54 791 aa17.84■□□□□ 0.45
PKP4-205ENST00000426248 KIAA1468Q9P260 1216 aa17.84■□□□□ 0.45
PKP4-205ENST00000426248 CCDC178Q5BJE1 867 aa17.84■□□□□ 0.45
PKP4-205ENST00000426248 RNF217Q8TC41 542 aa17.84■□□□□ 0.45
PKP4-205ENST00000426248 KCNB2Q92953 911 aa17.84■□□□□ 0.45
PKP4-205ENST00000426248 PCMTD1Q96MG8 357 aaPredicted RBP17.84■□□□□ 0.45
PKP4-205ENST00000426248 MTFR1LQ9H019 292 aa17.84■□□□□ 0.45
PKP4-205ENST00000426248 FANCLQ9NW38 375 aa17.84■□□□□ 0.45
PKP4-205ENST00000426248 SHANK3Q9BYB0 1731 aa17.84■□□□□ 0.45
PKP4-205ENST00000426248 TMEM232C9JQI7 657 aa17.84■□□□□ 0.45
PKP4-205ENST00000426248 PARP1P09874 1014 aaKnown RBP17.84■□□□□ 0.45
PKP4-205ENST00000426248 VSNL1P62760 191 aa17.84■□□□□ 0.45
PKP4-205ENST00000426248 CCDC70Q6NSX1 233 aa17.84■□□□□ 0.45
PKP4-205ENST00000426248 CCDC194A0A1B0GVG4 234 aa17.83■□□□□ 0.45
PKP4-205ENST00000426248 MYO1FO00160 1098 aa17.83■□□□□ 0.45
PKP4-205ENST00000426248 ENAHQ8N8S7 591 aaPredicted RBP17.83■□□□□ 0.45
PKP4-205ENST00000426248 CSRNP1Q96S65 589 aa17.83■□□□□ 0.45
PKP4-205ENST00000426248 LY9Q9HBG7 655 aa17.83■□□□□ 0.45
PKP4-205ENST00000426248 TRIM65Q6PJ69 517 aa17.83■□□□□ 0.45
PKP4-205ENST00000426248 DIS3L2Q8IYB7 885 aaKnown RBP17.83■□□□□ 0.45
PKP4-205ENST00000426248 PNKPQ96T60 521 aa17.83■□□□□ 0.45
PKP4-205ENST00000426248 VWA3AA6NCI4 1184 aa17.83■□□□□ 0.44
PKP4-205ENST00000426248 GNAQP50148 359 aa17.83■□□□□ 0.44
PKP4-205ENST00000426248 MAP3K9P80192 1104 aa17.83■□□□□ 0.44
PKP4-205ENST00000426248 STIM1Q13586 685 aa17.83■□□□□ 0.44
PKP4-205ENST00000426248 FAM43BQ6ZT52 329 aaPredicted RBP17.83■□□□□ 0.44
PKP4-205ENST00000426248 ILDR1Q86SU0 546 aaPredicted RBP17.83■□□□□ 0.44
PKP4-205ENST00000426248 GDF11O95390 407 aa17.83■□□□□ 0.44
PKP4-205ENST00000426248 DEXIO95424 95 aa17.83■□□□□ 0.44
PKP4-205ENST00000426248 NDUFA8P51970 172 aa17.83■□□□□ 0.44
PKP4-205ENST00000426248 CIAPIN1Q6FI81 312 aa17.83■□□□□ 0.44
PKP4-205ENST00000426248 UBR2Q8IWV8 1755 aa17.82■□□□□ 0.44
PKP4-205ENST00000426248 A0A1B0GUA9 196 aa17.82■□□□□ 0.44
PKP4-205ENST00000426248 PAX7P23759 505 aa17.82■□□□□ 0.44
PKP4-205ENST00000426248 CDC27P30260 824 aa17.82■□□□□ 0.44
PKP4-205ENST00000426248 LIFRP42702 1097 aa17.82■□□□□ 0.44
PKP4-205ENST00000426248 EVX2Q03828 476 aa17.82■□□□□ 0.44
PKP4-205ENST00000426248 C12orf60Q5U649 245 aa17.82■□□□□ 0.44
PKP4-205ENST00000426248 STRIP1Q5VSL9 837 aa17.82■□□□□ 0.44
PKP4-205ENST00000426248 CCDC125Q86Z20 511 aa17.82■□□□□ 0.44
PKP4-205ENST00000426248 IGSF22Q8N9C0 903 aa17.82■□□□□ 0.44
PKP4-205ENST00000426248 DPF2Q92785 391 aa17.82■□□□□ 0.44
PKP4-205ENST00000426248 UBA5Q9GZZ9 404 aa17.82■□□□□ 0.44
PKP4-205ENST00000426248 FRMPD2Q68DX3 1309 aaPredicted RBP17.82■□□□□ 0.44
PKP4-205ENST00000426248 TFRCP02786 760 aaKnown RBP17.82■□□□□ 0.44
PKP4-205ENST00000426248 EZRP15311 586 aaKnown RBP17.82■□□□□ 0.44
PKP4-205ENST00000426248 ELF1P32519 619 aa17.82■□□□□ 0.44
PKP4-205ENST00000426248 NAPAP54920 295 aa17.82■□□□□ 0.44
PKP4-205ENST00000426248 TTLL12Q14166 644 aaPredicted RBP17.82■□□□□ 0.44
PKP4-205ENST00000426248 CEP85LQ5SZL2 805 aa17.82■□□□□ 0.44
PKP4-205ENST00000426248 KLHL10Q6JEL2 608 aa17.82■□□□□ 0.44
PKP4-205ENST00000426248 MIGA2Q7L4E1 593 aa17.82■□□□□ 0.44
PKP4-205ENST00000426248 CPVLQ9H3G5 476 aa17.82■□□□□ 0.44
PKP4-205ENST00000426248 IL1R1P14778 569 aa17.82■□□□□ 0.44
PKP4-205ENST00000426248 EGFL6Q8IUX8 553 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms