RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 KBTBD4Q9NVX7 518 aa4.71□□□□□ -1.66
SF3B1-205ENST00000424674 FANCLQ9NW38 375 aa4.71□□□□□ -1.66
SF3B1-205ENST00000424674 KCNH3Q9ULD8 1083 aa4.71□□□□□ -1.66
SF3B1-205ENST00000424674 SCINQ9Y6U3 715 aa4.71□□□□□ -1.66
SF3B1-205ENST00000424674 DNAJC25-GNG10A0A024R161 153 aa4.7□□□□□ -1.66
SF3B1-205ENST00000424674 ZNF500O60304 480 aaPredicted RBP4.7□□□□□ -1.66
SF3B1-205ENST00000424674 FOSP01100 380 aaPredicted RBP4.7□□□□□ -1.66
SF3B1-205ENST00000424674 MYL1P05976 194 aa4.7□□□□□ -1.66
SF3B1-205ENST00000424674 TPP2P29144 1249 aaPredicted RBP4.7□□□□□ -1.66
SF3B1-205ENST00000424674 GAB4Q2WGN9 574 aa4.7□□□□□ -1.66
SF3B1-205ENST00000424674 RALGPS1Q5JS13 557 aa4.7□□□□□ -1.66
SF3B1-205ENST00000424674 SNAP47Q5SQN1 464 aa4.7□□□□□ -1.66
SF3B1-205ENST00000424674 TTC6Q86TZ1 520 aa4.7□□□□□ -1.66
SF3B1-205ENST00000424674 CREG2Q8IUH2 290 aa4.7□□□□□ -1.66
SF3B1-205ENST00000424674 WDR75Q8IWA0 830 aaKnown RBP4.7□□□□□ -1.66
SF3B1-205ENST00000424674 PPP1R16BQ96T49 567 aa4.7□□□□□ -1.66
SF3B1-205ENST00000424674 MPHOSPH6Q99547 160 aaKnown RBP4.7□□□□□ -1.66
SF3B1-205ENST00000424674 RSRP1Q9BUV0 290 aa4.7□□□□□ -1.66
SF3B1-205ENST00000424674 GPR62Q9BZJ7 368 aa4.7□□□□□ -1.66
SF3B1-205ENST00000424674 DUSP15Q9H1R2 295 aaPredicted RBP4.7□□□□□ -1.66
SF3B1-205ENST00000424674 GPATCH2Q9NW75 528 aa4.7□□□□□ -1.66
SF3B1-205ENST00000424674 SNTG2Q9NY99 539 aa4.7□□□□□ -1.66
SF3B1-205ENST00000424674 REV1Q9UBZ9 1251 aa4.7□□□□□ -1.66
SF3B1-205ENST00000424674 KLHL3Q9UH77 587 aa4.7□□□□□ -1.66
SF3B1-205ENST00000424674 DUSP13Q9UII6 198 aa4.7□□□□□ -1.66
SF3B1-205ENST00000424674 PRR36Q9H6K5 1346 aa4.7□□□□□ -1.66
SF3B1-205ENST00000424674 GRIN3BO60391 1043 aa4.69□□□□□ -1.66
SF3B1-205ENST00000424674 HTR3BO95264 441 aa4.69□□□□□ -1.66
SF3B1-205ENST00000424674 SRFP11831 508 aa4.69□□□□□ -1.66
SF3B1-205ENST00000424674 COPB2P35606 906 aa4.69□□□□□ -1.66
SF3B1-205ENST00000424674 MPP2Q14168 576 aa4.69□□□□□ -1.66
SF3B1-205ENST00000424674 PRR23BQ6ZRT6 265 aa4.69□□□□□ -1.66
SF3B1-205ENST00000424674 REC114Q7Z4M0 266 aa4.69□□□□□ -1.66
SF3B1-205ENST00000424674 KIAA0907Q7Z7F0 614 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-205ENST00000424674 PAF1Q8N7H5 531 aa4.69□□□□□ -1.66
SF3B1-205ENST00000424674 GOLM1Q8NBJ4 401 aa4.69□□□□□ -1.66
SF3B1-205ENST00000424674 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.69□□□□□ -1.66
SF3B1-205ENST00000424674 ABHD4Q8TB40 342 aa4.69□□□□□ -1.66
SF3B1-205ENST00000424674 RASGRP4Q8TDF6 673 aa4.69□□□□□ -1.66
SF3B1-205ENST00000424674 SH3TC2Q8TF17 1288 aa4.69□□□□□ -1.66
SF3B1-205ENST00000424674 SEC16BQ96JE7 1060 aa4.69□□□□□ -1.66
SF3B1-205ENST00000424674 ZNF512BQ96KM6 892 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-205ENST00000424674 DEPDC7Q96QD5 511 aa4.69□□□□□ -1.66
SF3B1-205ENST00000424674 ZNF700Q9H0M5 742 aa4.69□□□□□ -1.66
SF3B1-205ENST00000424674 GGT7Q9UJ14 662 aa4.69□□□□□ -1.66
SF3B1-205ENST00000424674 THRAP3Q9Y2W1 955 aaKnown RBP4.69□□□□□ -1.66
SF3B1-205ENST00000424674 POLR3KQ9Y2Y1 108 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-205ENST00000424674 CFAP69A5D8W1 941 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 WASH4PA8MWX3 477 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 NRDCO43847 1150 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 TSPAN15O95858 294 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 FGAP02671 866 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 COL6A1P12109 1028 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 LTKP29376 864 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 MASP1P48740 699 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 HK2P52789 917 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 EPHB1P54762 984 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 POU5F1Q01860 360 aaKnown RBP4.68□□□□□ -1.66
SF3B1-205ENST00000424674 EGR3Q06889 387 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 PAK2Q13177 524 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 RAPGEF1Q13905 1077 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 MAPRE1Q15691 268 aaKnown RBP4.68□□□□□ -1.66
SF3B1-205ENST00000424674 EFCAB2Q5VUJ9 269 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 PPP4R4Q6NUP7 873 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 TSPYL5Q86VY4 417 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-205ENST00000424674 PHACTR4Q8IZ21 702 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 FEZ1Q99689 392 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 PAGR1Q9BTK6 254 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 ASPNQ9BXN1 380 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 INO80BQ9C086 356 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-205ENST00000424674 NSUN3Q9H649 340 aaKnown RBP4.68□□□□□ -1.66
SF3B1-205ENST00000424674 CASS4Q9NQ75 786 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 STRIP2Q9ULQ0 834 aa4.68□□□□□ -1.66
SF3B1-205ENST00000424674 CHURC1-FNTBB4DL54 471 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 NPHP1O15259 732 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 HPXP02790 462 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 GARTP22102 1010 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 RAP1GAPP47736 663 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 ERVFC1P60507 584 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 RASA3Q14644 834 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 L1TD1Q5T7N2 865 aaKnown RBP4.67□□□□□ -1.66
SF3B1-205ENST00000424674 FBXL19Q6PCT2 694 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 CCDC174Q6PII3 467 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 RINLQ6ZS11 566 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 FAM196AQ6ZSG2 479 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 C16orf86Q6ZW13 317 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 SYDE1Q6ZW31 735 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-205ENST00000424674 ANKS3Q6ZW76 656 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 ERMP1Q7Z2K6 904 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 KRT26Q7Z3Y9 468 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 FBXO15Q8NCQ5 510 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-205ENST00000424674 CXorf38Q8TB03 319 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 BAHD1Q8TBE0 780 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-205ENST00000424674 MYLIPQ8WY64 445 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 RUNDC1Q96C34 613 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 CCDC74BQ96LY2 380 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 KREMEN1Q96MU8 473 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 DIRC2Q96SL1 478 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 ADAMTS10Q9H324 1103 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 ZNF408Q9H9D4 720 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms