RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 MARCH10Q8NA82 808 aaPredicted RBP3.9□□□□□ -1.79
PMS1-209ENST00000424059 DACT3Q96B18 629 aaPredicted RBP3.9□□□□□ -1.79
PMS1-209ENST00000424059 DHRS1Q96LJ7 313 aa3.9□□□□□ -1.79
PMS1-209ENST00000424059 ACSL6Q9UKU0 697 aa3.9□□□□□ -1.79
PMS1-209ENST00000424059 SYN1P17600 705 aa3.89□□□□□ -1.79
PMS1-209ENST00000424059 PI3P19957 117 aa3.89□□□□□ -1.79
PMS1-209ENST00000424059 MCCP23508 829 aa3.89□□□□□ -1.79
PMS1-209ENST00000424059 VIPR1P32241 457 aa3.89□□□□□ -1.79
PMS1-209ENST00000424059 APOBRQ0VD83 1088 aa3.89□□□□□ -1.79
PMS1-209ENST00000424059 SSPNQ14714 243 aa3.89□□□□□ -1.79
PMS1-209ENST00000424059 INTS3Q68E01 1043 aaKnown RBP3.89□□□□□ -1.79
PMS1-209ENST00000424059 FAM43BQ6ZT52 329 aaPredicted RBP3.89□□□□□ -1.79
PMS1-209ENST00000424059 SLCO6A1Q86UG4 719 aa3.89□□□□□ -1.79
PMS1-209ENST00000424059 FTSJ3Q8IY81 847 aaKnown RBP3.89□□□□□ -1.79
PMS1-209ENST00000424059 CXorf38Q8TB03 319 aa3.89□□□□□ -1.79
PMS1-209ENST00000424059 CNTD2Q9H8S5 307 aa3.89□□□□□ -1.79
PMS1-209ENST00000424059 COPRSQ9NQ92 184 aa3.89□□□□□ -1.79
PMS1-209ENST00000424059 GGT7Q9UJ14 662 aa3.89□□□□□ -1.79
PMS1-209ENST00000424059 SASH1O94885 1247 aa3.88□□□□□ -1.79
PMS1-209ENST00000424059 BMP7P18075 431 aa3.88□□□□□ -1.79
PMS1-209ENST00000424059 AFF3P51826 1226 aaKnown RBP3.88□□□□□ -1.79
PMS1-209ENST00000424059 MRPL58Q14197 206 aaKnown RBP3.88□□□□□ -1.79
PMS1-209ENST00000424059 NFIXQ14938 502 aa3.88□□□□□ -1.79
PMS1-209ENST00000424059 NR1I3Q14994 352 aa3.88□□□□□ -1.79
PMS1-209ENST00000424059 MZB1Q8WU39 189 aa3.88□□□□□ -1.79
PMS1-209ENST00000424059 NKD1Q969G9 470 aa3.88□□□□□ -1.79
PMS1-209ENST00000424059 SRRTQ9BXP5 876 aaKnown RBP3.88□□□□□ -1.79
PMS1-209ENST00000424059 MKRN2Q9H000 416 aaKnown RBP3.88□□□□□ -1.79
PMS1-209ENST00000424059 TNFRSF12AQ9NP84 129 aa3.88□□□□□ -1.79
PMS1-209ENST00000424059 ADAMTS1Q9UHI8 967 aa3.88□□□□□ -1.79
PMS1-209ENST00000424059 GPR55Q9Y2T6 319 aaPredicted RBP3.88□□□□□ -1.79
PMS1-209ENST00000424059 MAFGO15525 162 aa3.88□□□□□ -1.79
PMS1-209ENST00000424059 TRIM13O60858 407 aa3.88□□□□□ -1.79
PMS1-209ENST00000424059 EFEMP2O95967 443 aa3.88□□□□□ -1.79
PMS1-209ENST00000424059 RBM25P49756 843 aaKnown RBP3.88□□□□□ -1.79
PMS1-209ENST00000424059 CDR1P51861 262 aa3.88□□□□□ -1.79
PMS1-209ENST00000424059 SNW1Q13573 536 aaKnown RBP3.88□□□□□ -1.79
PMS1-209ENST00000424059 SEZ6Q53EL9 994 aa3.88□□□□□ -1.79
PMS1-209ENST00000424059 SIRT2Q8IXJ6 389 aa3.88□□□□□ -1.79
PMS1-209ENST00000424059 C20orf173Q96LM9 149 aa3.88□□□□□ -1.79
PMS1-209ENST00000424059 SGPP1Q9BX95 441 aa3.88□□□□□ -1.79
PMS1-209ENST00000424059 KRTAP9-3Q9BYQ3 159 aa3.88□□□□□ -1.79
PMS1-209ENST00000424059 ERVK13-1Q9NX77 482 aa3.88□□□□□ -1.79
PMS1-209ENST00000424059 KLHL14Q9P2G3 628 aa3.88□□□□□ -1.79
PMS1-209ENST00000424059 SUCOQ9UBS9 1254 aaKnown RBP3.88□□□□□ -1.79
PMS1-209ENST00000424059 FKTNO75072 461 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 VAV1P15498 845 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 PTMSP20962 102 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 POLR2BP30876 1174 aaKnown RBP3.87□□□□□ -1.79
PMS1-209ENST00000424059 BUD31P41223 144 aaPredicted RBP3.87□□□□□ -1.79
PMS1-209ENST00000424059 CRKP46108 304 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 CYP4F8P98187 520 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 CLCQ05315 142 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 AUHQ13825 339 aaKnown RBP3.87□□□□□ -1.79
PMS1-209ENST00000424059 CYP2R1Q6VVX0 501 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 TMEM192Q8IY95 271 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 SLC6A18Q96N87 628 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 CHMP4BQ9H444 224 aaKnown RBP3.87□□□□□ -1.79
PMS1-209ENST00000424059 LUC7LQ9NQ29 371 aaKnown RBP3.87□□□□□ -1.79
PMS1-209ENST00000424059 GFOD1Q9NXC2 390 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 FBXL21Q9UKT6 434 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 A0A0G2JLL6 359 aaPredicted RBP3.87□□□□□ -1.79
PMS1-209ENST00000424059 MAPKAPK2P49137 400 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 EPHB3P54753 998 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 ANAPC15P60006 121 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 TAGLNQ01995 201 aaKnown RBP3.87□□□□□ -1.79
PMS1-209ENST00000424059 RAB3GAP1Q15042 981 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 ANKRD39Q53RE8 183 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 HLA-DQA1Q5Y7H0 255 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 GK5Q6ZS86 529 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 KIAA0825Q8IV33 1275 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 C7orf61Q8IZ16 206 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 NLGN1Q8N2Q7 840 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 ZNF526Q8TF50 670 aaPredicted RBP3.87□□□□□ -1.79
PMS1-209ENST00000424059 ZNRF3Q9ULT6 936 aa3.87□□□□□ -1.79
PMS1-209ENST00000424059 ARID4BQ4LE39 1312 aaPredicted RBP3.87□□□□□ -1.79
PMS1-209ENST00000424059 SRGAP3O43295 1099 aa3.86□□□□□ -1.79
PMS1-209ENST00000424059 MCM4P33991 863 aa3.86□□□□□ -1.79
PMS1-209ENST00000424059 GALK1P51570 392 aa3.86□□□□□ -1.79
PMS1-209ENST00000424059 PMS1P54277 932 aaKnown RBP3.86□□□□□ -1.79
PMS1-209ENST00000424059 CORO7P57737 925 aa3.86□□□□□ -1.79
PMS1-209ENST00000424059 CWF19L1Q69YN2 538 aaKnown RBP3.86□□□□□ -1.79
PMS1-209ENST00000424059 CNKSR3Q6P9H4 555 aa3.86□□□□□ -1.79
PMS1-209ENST00000424059 LDHDQ86WU2 507 aa3.86□□□□□ -1.79
PMS1-209ENST00000424059 NUP43Q8NFH3 380 aa3.86□□□□□ -1.79
PMS1-209ENST00000424059 DNAJC2Q99543 621 aaKnown RBP3.86□□□□□ -1.79
PMS1-209ENST00000424059 TM9SF2Q99805 663 aa3.86□□□□□ -1.79
PMS1-209ENST00000424059 CDADC1Q9BWV3 514 aa3.86□□□□□ -1.79
PMS1-209ENST00000424059 BCL2L13Q9BXK5 485 aa3.86□□□□□ -1.79
PMS1-209ENST00000424059 UBP1Q9NZI7 540 aa3.86□□□□□ -1.79
PMS1-209ENST00000424059 ZC3H12DA2A288 527 aaKnown RBP3.85□□□□□ -1.79
PMS1-209ENST00000424059 FOXD2O60548 495 aaPredicted RBP3.85□□□□□ -1.79
PMS1-209ENST00000424059 PRKCAP17252 672 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 PFKLP17858 780 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 CTSKP43235 329 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 TARBP2Q15633 366 aaKnown RBP3.85□□□□□ -1.79
PMS1-209ENST00000424059 ZPBP2Q6X784 338 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 TMC6Q7Z403 805 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 TMEFF1Q8IYR6 380 aa3.85□□□□□ -1.79
PMS1-209ENST00000424059 RBBP8NLQ8NC74 664 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms