RNA–Protein interactions for RNA: ENST00000423061.5

SYNE1-212, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE1, Length 27,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-212ENST00000423061 SPDYE16A6NNV3 312 aaPredicted RBP3.75□□□□□ -1.81
SYNE1-212ENST00000423061 JAK2O60674 1132 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 ME3Q16798 604 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 POTEEQ6S8J3 1075 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 LRRC2Q9BYS8 371 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 CHMLP26374 656 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 PDE1AP54750 535 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 INAQ16352 499 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 FAAH2Q6GMR7 532 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 FLCNQ8NFG4 579 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 ADGRL2O95490 1459 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 PDE5AO76074 875 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 EEF2P13639 858 aaKnown RBP3.75□□□□□ -1.81
SYNE1-212ENST00000423061 ADAM9Q13443 819 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 ZNF570Q96NI8 536 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 CDC42BPBQ9Y5S2 1711 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 SMUG1Q53HV7 270 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 CIB2O75838 187 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 CHGBP05060 677 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 ZCCHC18P0CG32 403 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 UCMAQ8WVF2 138 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 JDP2Q8WYK2 163 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 SYKP43405 635 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 NOTOA8MTQ0 251 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 FLOT1O75955 427 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 DRP2Q13474 957 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 BLOC1S2Q6QNY1 142 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 IQCF2Q8IXL9 164 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 MRPS27Q92552 414 aaKnown RBP3.75□□□□□ -1.81
SYNE1-212ENST00000423061 KIFAP3Q92845 792 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 TRIM31Q9BZY9 425 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 CEP131Q9UPN4 1083 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 MYL5Q02045 173 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 WLSQ5T9L3 541 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 AACSQ86V21 672 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 IFT20Q8IY31 132 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 CYP4X1Q8N118 509 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 LRRC8CQ8TDW0 803 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 KLHL25Q9H0H3 589 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 NOVA2Q9UNW9 492 aaKnown RBP3.75□□□□□ -1.81
SYNE1-212ENST00000423061 THOC7Q6I9Y2 204 aaKnown RBP3.75□□□□□ -1.81
SYNE1-212ENST00000423061 PHLDB3Q6NSJ2 640 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 PIP4K2CQ8TBX8 421 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 PSME1Q06323 249 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 SOGA3Q5TF21 947 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 ANKRD42Q8N9B4 389 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 TUBGCP4Q9UGJ1 667 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 TTC37Q6PGP7 1564 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 USP14P54578 494 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 PLCB4Q15147 1175 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 DNAJC9Q8WXX5 260 aa3.75□□□□□ -1.81
SYNE1-212ENST00000423061 CCDC152Q4G0S7 254 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.74□□□□□ -1.81
SYNE1-212ENST00000423061 SMARCAL1Q9NZC9 954 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 BARX2Q9UMQ3 279 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-212ENST00000423061 RAB11FIP3O75154 756 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 CCT6AP40227 531 aaKnown RBP3.74□□□□□ -1.81
SYNE1-212ENST00000423061 MTF1Q14872 753 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 TRIM10Q9UDY6 481 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 NFU1Q9UMS0 254 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 PHF8Q9UPP1 1060 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 RALGDSQ12967 914 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 PLCG2P16885 1265 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 KCNA3P22001 575 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 AGAP11Q8TF27 550 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 SURF6O75683 361 aaKnown RBP3.74□□□□□ -1.81
SYNE1-212ENST00000423061 MSH2P43246 934 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 KAZNQ674X7 775 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-212ENST00000423061 STMN2Q93045 179 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 RAB3IPQ96QF0 476 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-212ENST00000423061 N6AMT1Q9Y5N5 214 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 U3KPZ7 1027 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-212ENST00000423061 NQO1P15559 274 aaKnown RBP3.74□□□□□ -1.81
SYNE1-212ENST00000423061 NR1D1P20393 614 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 TMEM87AQ8NBN3 555 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 TRPA1O75762 1119 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 SLCO1A2P46721 670 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 NUDCD3Q8IVD9 361 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 SUN1O94901 812 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 MDH1P40925 334 aaKnown RBP3.74□□□□□ -1.81
SYNE1-212ENST00000423061 CUL4AQ13619 759 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 KRT24Q2M2I5 525 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 CCHCR1Q8TD31 782 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 MAGEC3Q8TD91 643 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 DKK3Q9UBP4 350 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 SSX2IPQ9Y2D8 614 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 ZCCHC8Q6NZY4 707 aaKnown RBP3.74□□□□□ -1.81
SYNE1-212ENST00000423061 ZNF280CQ8ND82 737 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 NELFBQ8WX92 580 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 ARHGAP45Q92619 1136 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 RPGRQ92834 1020 aaKnown RBP3.74□□□□□ -1.81
SYNE1-212ENST00000423061 LARSQ9P2J5 1176 aaKnown RBP3.74□□□□□ -1.81
SYNE1-212ENST00000423061 C2orf54Q08AI8 447 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 NCCRP1Q6ZVX7 275 aaPredicted RBP3.74□□□□□ -1.81
SYNE1-212ENST00000423061 UBE2OQ9C0C9 1292 aaKnown RBP3.74□□□□□ -1.81
SYNE1-212ENST00000423061 CTTNBP2NLQ9P2B4 639 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 GSPT1P15170 499 aaKnown RBP3.74□□□□□ -1.81
SYNE1-212ENST00000423061 CYP11B2P19099 503 aa3.74□□□□□ -1.81
SYNE1-212ENST00000423061 NLRP5P59047 1200 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms