RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 SAP30BPQ9UHR5 308 aaKnown RBP17.75■□□□□ 0.43
CDH1-202ENST00000422392 ZBTB22O15209 634 aa17.75■□□□□ 0.43
CDH1-202ENST00000422392 N4BP1O75113 896 aaKnown RBP17.75■□□□□ 0.43
CDH1-202ENST00000422392 TSPY3P0CV98 308 aa17.75■□□□□ 0.43
CDH1-202ENST00000422392 TSPY8P0CW00 308 aa17.75■□□□□ 0.43
CDH1-202ENST00000422392 WDR59Q6PJI9 974 aa17.75■□□□□ 0.43
CDH1-202ENST00000422392 AGPAT5Q9NUQ2 364 aa17.75■□□□□ 0.43
CDH1-202ENST00000422392 CTAGE15A4D2H0 777 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 CTAGE8P0CG41 777 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 TRIM14Q14142 442 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 GRM4Q14833 912 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 CTAGE6Q86UF2 777 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 CTAGE4Q8IX94 777 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 MSANTD4Q8NCY6 345 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 TGFBRAP1Q8WUH2 860 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 TRERF1Q96PN7 1200 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 MKRN1Q9UHC7 482 aaKnown RBP17.74■□□□□ 0.43
CDH1-202ENST00000422392 MYO6Q9UM54 1294 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 LUC7L2Q9Y383 392 aaKnown RBP17.74■□□□□ 0.43
CDH1-202ENST00000422392 LGALS16A8MUM7 142 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 SRGAP2O75044 1071 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 FAM193AP78312 1265 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 AMPD2Q01433 879 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 SLC10A5Q5PT55 438 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 DGKHQ86XP1 1220 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 OR8K1Q8NGG5 319 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 ZNF507Q8TCN5 953 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 SETDB2Q96T68 719 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 RAB21Q9UL25 225 aa17.74■□□□□ 0.43
CDH1-202ENST00000422392 STXBP3O00186 592 aa17.73■□□□□ 0.43
CDH1-202ENST00000422392 HERVK_113P62684 666 aa17.73■□□□□ 0.43
CDH1-202ENST00000422392 TAF3Q5VWG9 929 aa17.73■□□□□ 0.43
CDH1-202ENST00000422392 HPS3Q969F9 1004 aa17.73■□□□□ 0.43
CDH1-202ENST00000422392 SH3GLB2Q9NR46 395 aa17.73■□□□□ 0.43
CDH1-202ENST00000422392 PLCG1P19174 1290 aa17.73■□□□□ 0.43
CDH1-202ENST00000422392 AMIGO3Q86WK7 504 aa17.73■□□□□ 0.43
CDH1-202ENST00000422392 SMARCC1Q92922 1105 aaPredicted RBP17.73■□□□□ 0.43
CDH1-202ENST00000422392 KBTBD4Q9NVX7 518 aa17.73■□□□□ 0.43
CDH1-202ENST00000422392 THRAP3Q9Y2W1 955 aaKnown RBP17.73■□□□□ 0.43
CDH1-202ENST00000422392 NRAPQ86VF7 1730 aa17.72■□□□□ 0.43
CDH1-202ENST00000422392 MAST2Q6P0Q8 1798 aa17.72■□□□□ 0.43
CDH1-202ENST00000422392 FCER1AP12319 257 aa17.72■□□□□ 0.43
CDH1-202ENST00000422392 TXNRD1Q16881 649 aa17.72■□□□□ 0.43
CDH1-202ENST00000422392 LETM2Q2VYF4 491 aa17.72■□□□□ 0.43
CDH1-202ENST00000422392 TTI2Q6NXR4 508 aa17.72■□□□□ 0.43
CDH1-202ENST00000422392 MAPKAPK5Q8IW41 473 aa17.72■□□□□ 0.43
CDH1-202ENST00000422392 TMEM47Q9BQJ4 181 aa17.72■□□□□ 0.43
CDH1-202ENST00000422392 ADAM21Q9UKJ8 722 aa17.72■□□□□ 0.43
CDH1-202ENST00000422392 PDS5AQ29RF7 1337 aaKnown RBP17.72■□□□□ 0.43
CDH1-202ENST00000422392 MYH10P35580 1976 aa17.72■□□□□ 0.43
CDH1-202ENST00000422392 PSMA7O14818 248 aa17.72■□□□□ 0.43
CDH1-202ENST00000422392 ATP1A1P05023 1023 aaKnown RBP17.72■□□□□ 0.43
CDH1-202ENST00000422392 CCDC178Q5BJE1 867 aa17.72■□□□□ 0.43
CDH1-202ENST00000422392 CSGALNACT2Q8N6G5 542 aa17.72■□□□□ 0.43
CDH1-202ENST00000422392 GIMAP8Q8ND71 665 aaPredicted RBP17.72■□□□□ 0.43
CDH1-202ENST00000422392 DNAJC7Q99615 494 aa17.72■□□□□ 0.43
CDH1-202ENST00000422392 DUSP9Q99956 384 aaKnown RBP17.72■□□□□ 0.43
CDH1-202ENST00000422392 ANKRD2Q9GZV1 360 aa17.72■□□□□ 0.43
CDH1-202ENST00000422392 BARHL2Q9NY43 387 aa17.72■□□□□ 0.43
CDH1-202ENST00000422392 L1RE1Q9UN81 338 aa17.72■□□□□ 0.43
CDH1-202ENST00000422392 RCCD1A6NED2 376 aa17.71■□□□□ 0.43
CDH1-202ENST00000422392 CCNT1O60563 726 aaKnown RBP17.71■□□□□ 0.43
CDH1-202ENST00000422392 RHOBTB3O94955 611 aa17.71■□□□□ 0.43
CDH1-202ENST00000422392 LDHBP07195 334 aaKnown RBP17.71■□□□□ 0.43
CDH1-202ENST00000422392 STK4Q13043 487 aa17.71■□□□□ 0.43
CDH1-202ENST00000422392 WHAMMP3Q1A5X7 153 aa17.71■□□□□ 0.43
CDH1-202ENST00000422392 CCDC122Q5T0U0 273 aa17.71■□□□□ 0.43
CDH1-202ENST00000422392 GPIHBP1Q8IV16 184 aa17.71■□□□□ 0.43
CDH1-202ENST00000422392 ZNF444Q8N0Y2 327 aaPredicted RBP17.71■□□□□ 0.43
CDH1-202ENST00000422392 HNRNPLLQ8WVV9 542 aaKnown RBP17.71■□□□□ 0.43
CDH1-202ENST00000422392 CAPZA3Q96KX2 299 aa17.71■□□□□ 0.43
CDH1-202ENST00000422392 TUBGCP2Q9BSJ2 902 aa17.71■□□□□ 0.43
CDH1-202ENST00000422392 ANKIB1Q9P2G1 1089 aa17.71■□□□□ 0.43
CDH1-202ENST00000422392 SPATA31A5Q5VU36 1347 aa17.71■□□□□ 0.43
CDH1-202ENST00000422392 SPATA31A7Q8IWB4 1347 aa17.71■□□□□ 0.43
CDH1-202ENST00000422392 KCNB1Q14721 858 aa17.71■□□□□ 0.43
CDH1-202ENST00000422392 VAT1LQ9HCJ6 419 aa17.71■□□□□ 0.43
CDH1-202ENST00000422392 VPS18Q9P253 973 aa17.71■□□□□ 0.43
CDH1-202ENST00000422392 MYO1AQ9UBC5 1043 aa17.71■□□□□ 0.43
CDH1-202ENST00000422392 MAGEC2Q9UBF1 373 aaPredicted RBP17.71■□□□□ 0.43
CDH1-202ENST00000422392 CAPN11Q9UMQ6 739 aa17.71■□□□□ 0.43
CDH1-202ENST00000422392 FLT1P17948 1338 aa17.71■□□□□ 0.42
CDH1-202ENST00000422392 SBF2Q86WG5 1849 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 RASSF10A6NK89 507 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 TRIM21P19474 475 aaKnown RBP17.7■□□□□ 0.42
CDH1-202ENST00000422392 EEF1GP26641 437 aaKnown RBP17.7■□□□□ 0.42
CDH1-202ENST00000422392 TM4SF1P30408 202 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 PIP4K2BP78356 416 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 PDE4DQ08499 809 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 STIM1Q13586 685 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 ANKRD40Q6AI12 368 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 HDXQ7Z353 690 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 CABP7Q86V35 215 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 CCSER1Q9C0I3 900 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 THAP9Q9H5L6 903 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 CALCOCO1Q9P1Z2 691 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 DUSP10Q9Y6W6 482 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 NAV1Q8NEY1 1877 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 KLRF2D3W0D1 207 aa17.7■□□□□ 0.42
CDH1-202ENST00000422392 TECP42680 631 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms