RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 ERCC5P28715 1186 aaPredicted RBP12.35□□□□□ -0.43
DDX56-203ENST00000421223 E2F4Q16254 413 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 PDXDC2PQ6P474 469 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 SH3RF1Q7Z6J0 888 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 C4orf32Q8N8J7 132 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 NHSQ6T4R5 1651 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 SPDYE4A6NLX3 237 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 GTPBP6O43824 516 aaPredicted RBP12.35□□□□□ -0.43
DDX56-203ENST00000421223 HLA-DOAP06340 250 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 ZNF18P17022 549 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 PDE6BP35913 854 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 MTF1Q14872 753 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 CABP7Q86V35 215 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 PDCL2Q8N4E4 241 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 HPS3Q969F9 1004 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 LZTS2Q9BRK4 669 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 DISC1Q9NRI5 854 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 CASZ1Q86V15 1759 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 PRCPP42785 496 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 TMED8Q6PL24 325 aaPredicted RBP12.35□□□□□ -0.43
DDX56-203ENST00000421223 NYAP1Q6ZVC0 841 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 NEK8Q86SG6 692 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 POTEDQ86YR6 584 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 SPATA20Q8TB22 786 aa12.35□□□□□ -0.43
DDX56-203ENST00000421223 GAKO14976 1311 aa12.34□□□□□ -0.43
DDX56-203ENST00000421223 URI1O94763 535 aaPredicted RBP12.34□□□□□ -0.43
DDX56-203ENST00000421223 OR52Z1P0C646 297 aa12.34□□□□□ -0.43
DDX56-203ENST00000421223 PLCG1P19174 1290 aa12.34□□□□□ -0.43
DDX56-203ENST00000421223 CRKP46108 304 aa12.34□□□□□ -0.43
DDX56-203ENST00000421223 RBL2Q08999 1139 aa12.34□□□□□ -0.43
DDX56-203ENST00000421223 PAK1Q13153 545 aa12.34□□□□□ -0.43
DDX56-203ENST00000421223 PPP4R3BQ5MIZ7 849 aa12.34□□□□□ -0.43
DDX56-203ENST00000421223 ARL6IP4Q66PJ3 421 aaKnown RBP12.34□□□□□ -0.43
DDX56-203ENST00000421223 KRT25Q7Z3Z0 450 aa12.34□□□□□ -0.43
DDX56-203ENST00000421223 CERS3Q8IU89 383 aa12.34□□□□□ -0.43
DDX56-203ENST00000421223 FAM163AQ96GL9 167 aaPredicted RBP12.34□□□□□ -0.43
DDX56-203ENST00000421223 SPZ1Q9BXG8 430 aa12.34□□□□□ -0.43
DDX56-203ENST00000421223 CTIFO43310 598 aaKnown RBP12.34□□□□□ -0.43
DDX56-203ENST00000421223 GDF11O95390 407 aa12.34□□□□□ -0.43
DDX56-203ENST00000421223 SSBP05455 408 aaKnown RBP eCLIP12.34□□□□□ -0.43
DDX56-203ENST00000421223 ASIC1P78348 528 aa12.34□□□□□ -0.43
DDX56-203ENST00000421223 TOGARAM2Q6ZUX3 1019 aa12.34□□□□□ -0.43
DDX56-203ENST00000421223 ELOA2Q8IYF1 753 aaPredicted RBP12.34□□□□□ -0.43
DDX56-203ENST00000421223 MASTLQ96GX5 879 aa12.34□□□□□ -0.43
DDX56-203ENST00000421223 ZMYND12Q9H0C1 365 aa12.34□□□□□ -0.43
DDX56-203ENST00000421223 USP17L10C9JJH3 530 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 H0YIN7 160 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 TDP2O95551 362 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 TTLL1O95922 423 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 DYMQ7RTS9 669 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 CDK5RAP3Q96JB5 506 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 LZTFL1Q9NQ48 299 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 SNED1Q8TER0 1413 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 ROBO3Q96MS0 1386 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 THSD7AQ9UPZ6 1657 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 SOWAHDA6NJG2 315 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 GNG11P61952 73 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 NR1I3Q14994 352 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 AOC3Q16853 763 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 KMT5BQ4FZB7 885 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 APOBEC3HQ6NTF7 200 aaKnown RBP12.33□□□□□ -0.44
DDX56-203ENST00000421223 GPIHBP1Q8IV16 184 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 ADGRF4Q8IZF3 695 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 TC2NQ8N9U0 490 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 TRIM47Q96LD4 638 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 TAF1LQ8IZX4 1826 aa12.33□□□□□ -0.44
DDX56-203ENST00000421223 AKR1B15C9JRZ8 316 aaPredicted RBP12.32□□□□□ -0.44
DDX56-203ENST00000421223 IDEP14735 1019 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 CASP14P31944 242 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 ADCY7P51828 1080 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 CBX1P83916 185 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 NCBP1Q09161 790 aaKnown RBP12.32□□□□□ -0.44
DDX56-203ENST00000421223 KRT31Q15323 416 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 COL24A1Q17RW2 1714 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 NAALADL2Q58DX5 795 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 ANKRD20A12PQ8NF67 263 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 NUP88Q99567 741 aaPredicted RBP12.32□□□□□ -0.44
DDX56-203ENST00000421223 CCDC94Q9BW85 323 aaPredicted RBP12.32□□□□□ -0.44
DDX56-203ENST00000421223 PPP2R2CQ9Y2T4 447 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 POTEMA6NI47 508 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 PDE4DQ08499 809 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 PCMTD1Q96MG8 357 aaPredicted RBP12.32□□□□□ -0.44
DDX56-203ENST00000421223 TDRD3Q9H7E2 651 aaKnown RBP12.32□□□□□ -0.44
DDX56-203ENST00000421223 PRDM10Q9NQV6 1147 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 DDTLA6NHG4 134 aaPredicted RBP12.32□□□□□ -0.44
DDX56-203ENST00000421223 M0R2N6 131 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 TAL1P17542 331 aaPredicted RBP12.32□□□□□ -0.44
DDX56-203ENST00000421223 SHMT1P34896 483 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 PMS1P54277 932 aaKnown RBP12.32□□□□□ -0.44
DDX56-203ENST00000421223 UBXN1Q04323 297 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 CALCRLQ16602 461 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 ZNF658Q5TYW1 1059 aaPredicted RBP12.32□□□□□ -0.44
DDX56-203ENST00000421223 GALNT17Q6IS24 598 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 LRRC15Q8TF66 581 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 SRRTQ9BXP5 876 aaKnown RBP12.32□□□□□ -0.44
DDX56-203ENST00000421223 IRX2Q9BZI1 471 aaPredicted RBP12.32□□□□□ -0.44
DDX56-203ENST00000421223 RMND1Q9NWS8 449 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 LRWD1Q9UFC0 647 aa12.32□□□□□ -0.44
DDX56-203ENST00000421223 KCNJ18B7U540 433 aa12.31□□□□□ -0.44
DDX56-203ENST00000421223 USP17L15C9J2P7 530 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms