RNA–Protein interactions for RNA: ENST00000420798.6

TRO-208, Transcript of trophinin, humanhuman

TSL 2 BASIC

Gene TRO, Length 3,613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-208ENST00000420798 SF3A3Q12874 501 aaKnown RBP eCLIP11.2□□□□□ -0.622e-6■■■■□ 20.9
TRO-208ENST00000420798 CCDC122Q5T0U0 273 aa11.2□□□□□ -0.62
TRO-208ENST00000420798 KANK3Q6NY19 840 aa11.2□□□□□ -0.62
TRO-208ENST00000420798 NOA1Q8NC60 698 aaKnown RBP11.2□□□□□ -0.62
TRO-208ENST00000420798 ADD3Q9UEY8 706 aaKnown RBP11.2□□□□□ -0.62
TRO-208ENST00000420798 NPHP3-ACAD11A0A0J9YXS1 232 aa11.19□□□□□ -0.62
TRO-208ENST00000420798 BAG3O95817 575 aa11.19□□□□□ -0.62
TRO-208ENST00000420798 PFKFB3Q16875 520 aaPredicted RBP11.19□□□□□ -0.62
TRO-208ENST00000420798 DEF6Q9H4E7 631 aa11.19□□□□□ -0.62
TRO-208ENST00000420798 TCP11L1Q9NUJ3 509 aa11.19□□□□□ -0.62
TRO-208ENST00000420798 PCDHA6Q9UN73 950 aa11.19□□□□□ -0.62
TRO-208ENST00000420798 PCDHA8Q9Y5H6 950 aa11.19□□□□□ -0.62
TRO-208ENST00000420798 BAZ2AQ9UIF9 1905 aaKnown RBP11.19□□□□□ -0.62
TRO-208ENST00000420798 ALS2Q96Q42 1657 aa11.19□□□□□ -0.62
TRO-208ENST00000420798 USP17L15C9J2P7 530 aa11.19□□□□□ -0.62
TRO-208ENST00000420798 USP17L13C9JLJ4 530 aa11.19□□□□□ -0.62
TRO-208ENST00000420798 USP17L11C9JVI0 530 aa11.19□□□□□ -0.62
TRO-208ENST00000420798 USP17L18D6R9N7 530 aa11.19□□□□□ -0.62
TRO-208ENST00000420798 USP17L22D6RA61 530 aa11.19□□□□□ -0.62
TRO-208ENST00000420798 USP17L17D6RBQ6 530 aa11.19□□□□□ -0.62
TRO-208ENST00000420798 USP17L19D6RCP7 530 aa11.19□□□□□ -0.62
TRO-208ENST00000420798 USP17L20D6RJB6 530 aa11.19□□□□□ -0.62
TRO-208ENST00000420798 SARSP49591 514 aaKnown RBP11.19□□□□□ -0.62
TRO-208ENST00000420798 USP17L24Q0WX57 530 aa11.19□□□□□ -0.62
TRO-208ENST00000420798 PLS1Q14651 629 aa11.19□□□□□ -0.62
TRO-208ENST00000420798 BMS1Q14692 1282 aaKnown RBP11.19□□□□□ -0.62
TRO-208ENST00000420798 TTC19Q6DKK2 380 aaPredicted RBP11.19□□□□□ -0.62
TRO-208ENST00000420798 USP17L6PQ6QN14 398 aa11.19□□□□□ -0.62
TRO-208ENST00000420798 RIN2Q8WYP3 895 aaPredicted RBP11.19□□□□□ -0.62
TRO-208ENST00000420798 SMARCC1Q92922 1105 aaPredicted RBP11.19□□□□□ -0.62
TRO-208ENST00000420798 RBM28Q9NW13 759 aaKnown RBP11.19□□□□□ -0.62
TRO-208ENST00000420798 STK36Q9NRP7 1315 aa11.19□□□□□ -0.62
TRO-208ENST00000420798 BUB1O43683 1085 aa11.18□□□□□ -0.62
TRO-208ENST00000420798 TADA3O75528 432 aa11.18□□□□□ -0.62
TRO-208ENST00000420798 PLA2G4AP47712 749 aa11.18□□□□□ -0.62
TRO-208ENST00000420798 TDRD12Q587J7 1177 aaKnown RBP11.18□□□□□ -0.62
TRO-208ENST00000420798 EXOC1Q9NV70 894 aa11.18□□□□□ -0.62
TRO-208ENST00000420798 VPS18Q9P253 973 aa11.18□□□□□ -0.62
TRO-208ENST00000420798 WDR19Q8NEZ3 1342 aa11.18□□□□□ -0.62
TRO-208ENST00000420798 SIPA1L3O60292 1781 aaPredicted RBP11.18□□□□□ -0.62
TRO-208ENST00000420798 COL18A1P39060 1754 aa11.18□□□□□ -0.62
TRO-208ENST00000420798 KIF2AO00139 706 aaPredicted RBP11.18□□□□□ -0.62
TRO-208ENST00000420798 STX10O60499 249 aa11.18□□□□□ -0.62
TRO-208ENST00000420798 MFAP3LO75121 409 aa11.18□□□□□ -0.62
TRO-208ENST00000420798 KRT18P05783 430 aaKnown RBP11.18□□□□□ -0.62
TRO-208ENST00000420798 ATP2C1P98194 919 aaPredicted RBP11.18□□□□□ -0.62
TRO-208ENST00000420798 C12orf60Q5U649 245 aa11.18□□□□□ -0.62
TRO-208ENST00000420798 DHX37Q8IY37 1157 aaKnown RBP11.18□□□□□ -0.62
TRO-208ENST00000420798 BRIP1Q9BX63 1249 aa11.18□□□□□ -0.62
TRO-208ENST00000420798 PDE11AQ9HCR9 933 aa11.18□□□□□ -0.62
TRO-208ENST00000420798 LUC7L2Q9Y383 392 aaKnown RBP11.18□□□□□ -0.62
TRO-208ENST00000420798 MAEAQ7L5Y9 396 aa11.18□□□□□ -0.62
TRO-208ENST00000420798 FERMT2Q96AC1 680 aa11.18□□□□□ -0.62
TRO-208ENST00000420798 PNKPQ96T60 521 aa11.18□□□□□ -0.62
TRO-208ENST00000420798 FEZ1Q99689 392 aa11.18□□□□□ -0.62
TRO-208ENST00000420798 NOC4LQ9BVI4 516 aaKnown RBP11.18□□□□□ -0.62
TRO-208ENST00000420798 ARFGAP3Q9NP61 516 aa11.18□□□□□ -0.62
TRO-208ENST00000420798 PCDHA4Q9UN74 947 aa11.18□□□□□ -0.62
TRO-208ENST00000420798 A0A1B0GTH6 734 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 AKR1B1P15121 316 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 STAT3P40763 770 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 SF3B3Q15393 1217 aaKnown RBP11.17□□□□□ -0.62
TRO-208ENST00000420798 TCP11X2Q5H9J9 407 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 BCAS3Q9H6U6 928 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 MAD2L2Q9UI95 211 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 FHOD1Q9Y613 1164 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 CTAGE9A4FU28 777 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 SFI1A8K8P3 1242 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 GDF11O95390 407 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 SLC7A5Q01650 507 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 CYP4A11Q02928 519 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 ANKRD40Q6AI12 368 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRO-208ENST00000420798 CD209Q9NNX6 404 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 DISC1Q9NRI5 854 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 NARFQ9UHQ1 456 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 TTF2Q9UNY4 1162 aaKnown RBP11.17□□□□□ -0.62
TRO-208ENST00000420798 CALM1P0DP23 149 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 CALM2P0DP24 149 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 CALM3P0DP25 149 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 RASA1P20936 1047 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 LLGL1Q15334 1064 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 TERF2Q15554 542 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 FCHSD1Q86WN1 690 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 C2CD5Q86YS7 1000 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 SH2D3AQ9BRG2 576 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 LRRC4BQ9NT99 713 aa11.17□□□□□ -0.62
TRO-208ENST00000420798 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.17□□□□□ -0.62
TRO-208ENST00000420798 PHRF1Q9P1Y6 1649 aaKnown RBP11.17□□□□□ -0.62
TRO-208ENST00000420798 RBAK-RBAKDNI3L0D1 243 aa11.16□□□□□ -0.62
TRO-208ENST00000420798 NCK2O43639 380 aa11.16□□□□□ -0.62
TRO-208ENST00000420798 IPO7O95373 1038 aaKnown RBP11.16□□□□□ -0.62
TRO-208ENST00000420798 SMC1AQ14683 1233 aaKnown RBP11.16□□□□□ -0.62
TRO-208ENST00000420798 CCDC84Q86UT8 332 aaPredicted RBP11.16□□□□□ -0.62
TRO-208ENST00000420798 ZFPM1Q8IX07 1006 aa11.16□□□□□ -0.62
TRO-208ENST00000420798 GSDMAQ96QA5 445 aa11.16□□□□□ -0.62
TRO-208ENST00000420798 TUBGCP2Q9BSJ2 902 aa11.16□□□□□ -0.62
TRO-208ENST00000420798 LACRTQ9GZZ8 138 aa11.16□□□□□ -0.62
TRO-208ENST00000420798 GOLPH3Q9H4A6 298 aa11.16□□□□□ -0.62
TRO-208ENST00000420798 ABCB6Q9NP58 842 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms