RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 AIFM3Q96NN9 605 aa14.44□□□□□ -0.1
TMEM53-206ENST00000420706 ALG1Q9BT22 464 aa14.44□□□□□ -0.1
TMEM53-206ENST00000420706 SLC38A10Q9HBR0 1119 aa14.44□□□□□ -0.1
TMEM53-206ENST00000420706 SEC63Q9UGP8 760 aaKnown RBP14.44□□□□□ -0.1
TMEM53-206ENST00000420706 VWA5AO00534 786 aa14.43□□□□□ -0.1
TMEM53-206ENST00000420706 PPP1R11O60927 126 aaPredicted RBP14.43□□□□□ -0.1
TMEM53-206ENST00000420706 ZBED4O75132 1171 aa14.43□□□□□ -0.1
TMEM53-206ENST00000420706 NOGQ13253 232 aa14.43□□□□□ -0.1
TMEM53-206ENST00000420706 LARP1BQ659C4 914 aaKnown RBP14.43□□□□□ -0.1
TMEM53-206ENST00000420706 POTEEQ6S8J3 1075 aa14.43□□□□□ -0.1
TMEM53-206ENST00000420706 LBX2Q6XYB7 198 aa14.43□□□□□ -0.1
TMEM53-206ENST00000420706 REPS2Q8NFH8 660 aa14.43□□□□□ -0.1
TMEM53-206ENST00000420706 ZNF536O15090 1300 aa14.42□□□□□ -0.1
TMEM53-206ENST00000420706 IGF2BP3O00425 579 aaKnown RBP eCLIP14.42□□□□□ -0.1
TMEM53-206ENST00000420706 AOC2O75106 756 aa14.42□□□□□ -0.1
TMEM53-206ENST00000420706 HERVK_113P62684 666 aa14.42□□□□□ -0.1
TMEM53-206ENST00000420706 SREBF2Q12772 1141 aa14.42□□□□□ -0.1
TMEM53-206ENST00000420706 WWC2Q6AWC2 1192 aa14.42□□□□□ -0.1
TMEM53-206ENST00000420706 CCDC174Q6PII3 467 aa14.42□□□□□ -0.1
TMEM53-206ENST00000420706 IFNL1Q8IU54 200 aa14.42□□□□□ -0.1
TMEM53-206ENST00000420706 COA7Q96BR5 231 aa14.42□□□□□ -0.1
TMEM53-206ENST00000420706 SHISA4Q96DD7 197 aa14.42□□□□□ -0.1
TMEM53-206ENST00000420706 AMNQ9BXJ7 453 aa14.42□□□□□ -0.1
TMEM53-206ENST00000420706 ZCCHC17Q9NP64 241 aaKnown RBP14.42□□□□□ -0.1
TMEM53-206ENST00000420706 PNMA3Q9UL41 463 aa14.42□□□□□ -0.1
TMEM53-206ENST00000420706 KIF3AQ9Y496 699 aa14.42□□□□□ -0.1
TMEM53-206ENST00000420706 WDR33Q9C0J8 1336 aaKnown RBP14.41□□□□□ -0.1
TMEM53-206ENST00000420706 hCG_1984214I3L0E3 225 aa14.41□□□□□ -0.1
TMEM53-206ENST00000420706 CYP2C8P10632 490 aa14.41□□□□□ -0.1
TMEM53-206ENST00000420706 DDIT3P35638 169 aa14.41□□□□□ -0.1
TMEM53-206ENST00000420706 VEGFBP49765 207 aa14.41□□□□□ -0.1
TMEM53-206ENST00000420706 TYW1BQ6NUM6 668 aa14.41□□□□□ -0.1
TMEM53-206ENST00000420706 FBXO11Q86XK2 927 aa14.41□□□□□ -0.1
TMEM53-206ENST00000420706 CPXCR1Q8N123 301 aa14.41□□□□□ -0.1
TMEM53-206ENST00000420706 ZNF713Q8N859 430 aaPredicted RBP14.41□□□□□ -0.1
TMEM53-206ENST00000420706 GPKOWQ92917 476 aaPredicted RBP eCLIP14.41□□□□□ -0.1
TMEM53-206ENST00000420706 C8orf76Q96K31 380 aa14.41□□□□□ -0.1
TMEM53-206ENST00000420706 RAVER2Q9HCJ3 691 aaKnown RBP14.41□□□□□ -0.1
TMEM53-206ENST00000420706 SH3GLB2Q9NR46 395 aa14.41□□□□□ -0.1
TMEM53-206ENST00000420706 GJB4Q9NTQ9 266 aa14.41□□□□□ -0.1
TMEM53-206ENST00000420706 BARHL2Q9NY43 387 aa14.41□□□□□ -0.1
TMEM53-206ENST00000420706 VPS54Q9P1Q0 977 aa14.41□□□□□ -0.1
TMEM53-206ENST00000420706 CTDP1Q9Y5B0 961 aaPredicted RBP14.41□□□□□ -0.1
TMEM53-206ENST00000420706 STXBP3O00186 592 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 ATP2A1O14983 1001 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 CNMDO75829 334 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 ICAM1P05362 532 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 PDCP20941 246 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 SYT1P21579 422 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 FOSBP53539 338 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 OAZ1P54368 228 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 TMEM132BQ14DG7 1078 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 KRT40Q6A162 431 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 OTUD7BQ6GQQ9 843 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 HEATR3Q7Z4Q2 680 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 REM2Q8IYK8 340 aaPredicted RBP14.4□□□□□ -0.1
TMEM53-206ENST00000420706 DNAJC5GQ8N7S2 189 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 MB21D1Q8N884 522 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 RGS22Q8NE09 1264 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 FBXO18Q8NFZ0 1043 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 GTF3C2Q8WUA4 911 aaPredicted RBP14.4□□□□□ -0.1
TMEM53-206ENST00000420706 AGBL1Q96MI9 1066 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 BTBD7Q9P203 1132 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 RBPJLQ9UBG7 517 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 PCDHA1Q9Y5I3 950 aa14.4□□□□□ -0.1
TMEM53-206ENST00000420706 COL11A1P12107 1806 aaPredicted RBP14.39□□□□□ -0.11
TMEM53-206ENST00000420706 PEX10O60683 326 aa14.39□□□□□ -0.11
TMEM53-206ENST00000420706 XBP1P17861 261 aa14.39□□□□□ -0.11
TMEM53-206ENST00000420706 MAP2K2P36507 400 aa14.39□□□□□ -0.11
TMEM53-206ENST00000420706 STAT3P40763 770 aa14.39□□□□□ -0.11
TMEM53-206ENST00000420706 TRAF1Q13077 416 aa14.39□□□□□ -0.11
TMEM53-206ENST00000420706 Q3C1V9 767 aa14.39□□□□□ -0.11
TMEM53-206ENST00000420706 USH1GQ495M9 461 aa14.39□□□□□ -0.11
TMEM53-206ENST00000420706 PARK7Q99497 189 aaKnown RBP14.39□□□□□ -0.11
TMEM53-206ENST00000420706 PNMA2Q9UL42 364 aa14.39□□□□□ -0.11
TMEM53-206ENST00000420706 ZNF214Q9UL59 606 aaPredicted RBP14.39□□□□□ -0.11
TMEM53-206ENST00000420706 KCNJ14Q9UNX9 436 aa14.39□□□□□ -0.11
TMEM53-206ENST00000420706 RABGAP1Q9Y3P9 1069 aa14.39□□□□□ -0.11
TMEM53-206ENST00000420706 SMCHD1A6NHR9 2005 aa14.39□□□□□ -0.11
TMEM53-206ENST00000420706 SMCO2A6NFE2 343 aa14.38□□□□□ -0.11
TMEM53-206ENST00000420706 STX6O43752 255 aa14.38□□□□□ -0.11
TMEM53-206ENST00000420706 PDIA4P13667 645 aaKnown RBP14.38□□□□□ -0.11
TMEM53-206ENST00000420706 TAL1P17542 331 aaPredicted RBP14.38□□□□□ -0.11
TMEM53-206ENST00000420706 GCLCP48506 637 aaPredicted RBP14.38□□□□□ -0.11
TMEM53-206ENST00000420706 NAPAP54920 295 aa14.38□□□□□ -0.11
TMEM53-206ENST00000420706 GUCY1B3Q02153 619 aa14.38□□□□□ -0.11
TMEM53-206ENST00000420706 TRIM29Q14134 588 aa14.38□□□□□ -0.11
TMEM53-206ENST00000420706 TAF1CQ15572 869 aaPredicted RBP14.38□□□□□ -0.11
TMEM53-206ENST00000420706 FAM177A1Q8N128 213 aaPredicted RBP14.38□□□□□ -0.11
TMEM53-206ENST00000420706 CCDC148Q8NFR7 591 aa14.38□□□□□ -0.11
TMEM53-206ENST00000420706 PAGR1Q9BTK6 254 aa14.38□□□□□ -0.11
TMEM53-206ENST00000420706 PHF20Q9BVI0 1012 aa14.38□□□□□ -0.11
TMEM53-206ENST00000420706 TXNRD2Q9NNW7 524 aa14.38□□□□□ -0.11
TMEM53-206ENST00000420706 CCPG1Q9ULG6 757 aa14.38□□□□□ -0.11
TMEM53-206ENST00000420706 RIPK3Q9Y572 518 aa14.38□□□□□ -0.11
TMEM53-206ENST00000420706 ABCB11O95342 1321 aa14.38□□□□□ -0.11
TMEM53-206ENST00000420706 ESYT2A0FGR8 921 aa14.37□□□□□ -0.11
TMEM53-206ENST00000420706 H3BQV1 296 aa14.37□□□□□ -0.11
TMEM53-206ENST00000420706 ALAS1P13196 640 aa14.37□□□□□ -0.11
TMEM53-206ENST00000420706 NLRP5P59047 1200 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms