RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 ZNF365Q70YC5 407 aa17.06■□□□□ 0.32
NFE4-201ENST00000420058 GLT1D1Q96MS3 346 aa17.06■□□□□ 0.32
NFE4-201ENST00000420058 ABHD16BQ9H3Z7 469 aa17.06■□□□□ 0.32
NFE4-201ENST00000420058 ARPP21Q9UBL0 812 aaPredicted RBP17.06■□□□□ 0.32
NFE4-201ENST00000420058 CLIP2Q9UDT6 1046 aa17.06■□□□□ 0.32
NFE4-201ENST00000420058 MCM3APO60318 1980 aa17.06■□□□□ 0.32
NFE4-201ENST00000420058 SMARCA5O60264 1052 aaPredicted RBP17.05■□□□□ 0.32
NFE4-201ENST00000420058 CNTN2Q02246 1040 aa17.05■□□□□ 0.32
NFE4-201ENST00000420058 PPIGQ13427 754 aaKnown RBP eCLIP17.05■□□□□ 0.32
NFE4-201ENST00000420058 GNASQ5JWF2 1037 aa17.05■□□□□ 0.32
NFE4-201ENST00000420058 GIMAP6Q6P9H5 292 aa17.05■□□□□ 0.32
NFE4-201ENST00000420058 ARMCX2Q7L311 632 aa17.05■□□□□ 0.32
NFE4-201ENST00000420058 SLC43A3Q8NBI5 491 aa17.05■□□□□ 0.32
NFE4-201ENST00000420058 PCSK9Q8NBP7 692 aaKnown RBP17.05■□□□□ 0.32
NFE4-201ENST00000420058 DDRGK1Q96HY6 314 aa17.05■□□□□ 0.32
NFE4-201ENST00000420058 EPB41L4AQ9HCS5 686 aaPredicted RBP17.05■□□□□ 0.32
NFE4-201ENST00000420058 CXXC1Q9P0U4 656 aaPredicted RBP17.05■□□□□ 0.32
NFE4-201ENST00000420058 GRIN2DO15399 1336 aa17.04■□□□□ 0.32
NFE4-201ENST00000420058 ZBED4O75132 1171 aa17.04■□□□□ 0.32
NFE4-201ENST00000420058 PTGS1P23219 599 aa17.04■□□□□ 0.32
NFE4-201ENST00000420058 SLC4A3P48751 1232 aa17.04■□□□□ 0.32
NFE4-201ENST00000420058 CCDC144CPQ8IYA2 1237 aa17.04■□□□□ 0.32
NFE4-201ENST00000420058 KIFC2Q96AC6 838 aa17.04■□□□□ 0.32
NFE4-201ENST00000420058 VWCEQ96DN2 955 aa17.04■□□□□ 0.32
NFE4-201ENST00000420058 PRDM12Q9H4Q4 367 aa17.04■□□□□ 0.32
NFE4-201ENST00000420058 MKNK2Q9HBH9 465 aa17.04■□□□□ 0.32
NFE4-201ENST00000420058 MTMR4Q9NYA4 1195 aa17.04■□□□□ 0.32
NFE4-201ENST00000420058 DDX19BQ9UMR2 479 aa17.04■□□□□ 0.32
NFE4-201ENST00000420058 MROH7Q68CQ1 1323 aa17.03■□□□□ 0.32
NFE4-201ENST00000420058 A0A0U1RQG5 324 aaPredicted RBP17.03■□□□□ 0.32
NFE4-201ENST00000420058 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.03■□□□□ 0.32
NFE4-201ENST00000420058 MINDY4BA8MYZ0 360 aa17.03■□□□□ 0.32
NFE4-201ENST00000420058 CYP2C18P33260 490 aa17.03■□□□□ 0.32
NFE4-201ENST00000420058 BEX3Q00994 111 aa17.03■□□□□ 0.32
NFE4-201ENST00000420058 AKNAD1Q5T1N1 836 aa17.03■□□□□ 0.32
NFE4-201ENST00000420058 ZSCAN25Q6NSZ9 544 aa17.03■□□□□ 0.32
NFE4-201ENST00000420058 ANKRD35Q8N283 1001 aa17.03■□□□□ 0.32
NFE4-201ENST00000420058 FAM133AQ8N9E0 248 aa17.03■□□□□ 0.32
NFE4-201ENST00000420058 CHST13Q8NET6 341 aa17.03■□□□□ 0.32
NFE4-201ENST00000420058 CEP95Q96GE4 821 aa17.03■□□□□ 0.32
NFE4-201ENST00000420058 PPP1R12CQ9BZL4 782 aa17.03■□□□□ 0.32
NFE4-201ENST00000420058 FEM1BQ9UK73 627 aa17.03■□□□□ 0.32
NFE4-201ENST00000420058 GNEQ9Y223 722 aaKnown RBP17.03■□□□□ 0.32
NFE4-201ENST00000420058 DDX49Q9Y6V7 483 aaKnown RBP17.03■□□□□ 0.32
NFE4-201ENST00000420058 ZNF536O15090 1300 aa17.02■□□□□ 0.32
NFE4-201ENST00000420058 UMODL1Q5DID0 1318 aa17.02■□□□□ 0.32
NFE4-201ENST00000420058 SOWAHBA6NEL2 793 aa17.02■□□□□ 0.32
NFE4-201ENST00000420058 TNFRSF10AO00220 468 aa17.02■□□□□ 0.32
NFE4-201ENST00000420058 PRDM1O75626 825 aa17.02■□□□□ 0.32
NFE4-201ENST00000420058 OAZ1P54368 228 aa17.02■□□□□ 0.32
NFE4-201ENST00000420058 TMEM63BQ5T3F8 832 aa17.02■□□□□ 0.32
NFE4-201ENST00000420058 TMEM199Q8N511 208 aa17.02■□□□□ 0.32
NFE4-201ENST00000420058 GMCL1P1Q8NEA9 526 aa17.02■□□□□ 0.32
NFE4-201ENST00000420058 HERVK_113Q902F9 699 aa17.02■□□□□ 0.32
NFE4-201ENST00000420058 VTI1AQ96AJ9 217 aa17.02■□□□□ 0.32
NFE4-201ENST00000420058 MYH7P12883 1935 aa17.02■□□□□ 0.31
NFE4-201ENST00000420058 MS4A1P11836 297 aa17.01■□□□□ 0.31
NFE4-201ENST00000420058 KBTBD3Q8NAB2 608 aa17.01■□□□□ 0.31
NFE4-201ENST00000420058 PPM1EQ8WY54 764 aa17.01■□□□□ 0.31
NFE4-201ENST00000420058 IL23AQ9NPF7 189 aa17.01■□□□□ 0.31
NFE4-201ENST00000420058 FBXO40Q9UH90 709 aa17.01■□□□□ 0.31
NFE4-201ENST00000420058 YBX2Q9Y2T7 364 aaKnown RBP17.01■□□□□ 0.31
NFE4-201ENST00000420058 CXCL17Q6UXB2 119 aa17■□□□□ 0.31
NFE4-201ENST00000420058 CCDC129Q6ZRS4 1044 aa17■□□□□ 0.31
NFE4-201ENST00000420058 MIER1Q8N108 512 aa17■□□□□ 0.31
NFE4-201ENST00000420058 LRRC47Q8N1G4 583 aaKnown RBP17■□□□□ 0.31
NFE4-201ENST00000420058 ATXN2LQ8WWM7 1075 aaKnown RBP17■□□□□ 0.31
NFE4-201ENST00000420058 APPBP2Q92624 585 aa17■□□□□ 0.31
NFE4-201ENST00000420058 AGBL1Q96MI9 1066 aa17■□□□□ 0.31
NFE4-201ENST00000420058 ASB2Q96Q27 587 aa17■□□□□ 0.31
NFE4-201ENST00000420058 LRRCC1Q9C099 1032 aa17■□□□□ 0.31
NFE4-201ENST00000420058 SPC25Q9HBM1 224 aa17■□□□□ 0.31
NFE4-201ENST00000420058 A1CFQ9NQ94 594 aaKnown RBP17■□□□□ 0.31
NFE4-201ENST00000420058 ECHDC1Q9NTX5 307 aa17■□□□□ 0.31
NFE4-201ENST00000420058 SYNPO2Q9UMS6 1093 aa17■□□□□ 0.31
NFE4-201ENST00000420058 M0R2C6 588 aa16.99■□□□□ 0.31
NFE4-201ENST00000420058 RNF113AO15541 343 aaKnown RBP16.99■□□□□ 0.31
NFE4-201ENST00000420058 GPAA1O43292 621 aa16.99■□□□□ 0.31
NFE4-201ENST00000420058 BMP3P12645 472 aa16.99■□□□□ 0.31
NFE4-201ENST00000420058 SMPD1P17405 629 aa16.99■□□□□ 0.31
NFE4-201ENST00000420058 COL9A1P20849 921 aa16.99■□□□□ 0.31
NFE4-201ENST00000420058 TNFAIP2Q03169 654 aa16.99■□□□□ 0.31
NFE4-201ENST00000420058 TSHZ3Q63HK5 1081 aa16.99■□□□□ 0.31
NFE4-201ENST00000420058 SLFN13Q68D06 897 aa16.99■□□□□ 0.31
NFE4-201ENST00000420058 PSRC1Q6PGN9 363 aaPredicted RBP16.99■□□□□ 0.31
NFE4-201ENST00000420058 CCDC174Q6PII3 467 aa16.99■□□□□ 0.31
NFE4-201ENST00000420058 ZNF444Q8N0Y2 327 aaPredicted RBP16.99■□□□□ 0.31
NFE4-201ENST00000420058 NEDD1Q8NHV4 660 aa16.99■□□□□ 0.31
NFE4-201ENST00000420058 GAS2L1Q99501 681 aaPredicted RBP16.99■□□□□ 0.31
NFE4-201ENST00000420058 PDGFCQ9NRA1 345 aa16.99■□□□□ 0.31
NFE4-201ENST00000420058 HOMER2Q9NSB8 354 aa16.99■□□□□ 0.31
NFE4-201ENST00000420058 RAPGEFL1Q9UHV5 662 aa16.99■□□□□ 0.31
NFE4-201ENST00000420058 PATL2C9JE40 543 aaKnown RBP16.98■□□□□ 0.31
NFE4-201ENST00000420058 TMEM232C9JQI7 657 aa16.98■□□□□ 0.31
NFE4-201ENST00000420058 TTLL1O95922 423 aa16.98■□□□□ 0.31
NFE4-201ENST00000420058 FGBP02675 491 aa16.98■□□□□ 0.31
NFE4-201ENST00000420058 TAPT1Q6NXT6 567 aa16.98■□□□□ 0.31
NFE4-201ENST00000420058 IFNL3Q8IZI9 196 aa16.98■□□□□ 0.31
NFE4-201ENST00000420058 NOC4LQ9BVI4 516 aaKnown RBP16.98■□□□□ 0.31
NFE4-201ENST00000420058 TRPV6Q9H1D0 765 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms