RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 SLC9A7Q96T83 725 aa12.75□□□□□ -0.37
RAPGEF1-205ENST00000419442 GREB1LQ9C091 1923 aaPredicted RBP12.75□□□□□ -0.37
RAPGEF1-205ENST00000419442 LMCD1Q9NZU5 365 aa12.75□□□□□ -0.37
RAPGEF1-205ENST00000419442 PNMA6EA0A0J9YXQ4 647 aa12.74□□□□□ -0.37
RAPGEF1-205ENST00000419442 B4GALT4O60513 344 aa12.74□□□□□ -0.37
RAPGEF1-205ENST00000419442 IDH1O75874 414 aaKnown RBP12.74□□□□□ -0.37
RAPGEF1-205ENST00000419442 ALADP13716 330 aa12.74□□□□□ -0.37
RAPGEF1-205ENST00000419442 ITGA7Q13683 1181 aa12.74□□□□□ -0.37
RAPGEF1-205ENST00000419442 CXCL17Q6UXB2 119 aa12.74□□□□□ -0.37
RAPGEF1-205ENST00000419442 ARNTL2Q8WYA1 636 aa12.74□□□□□ -0.37
RAPGEF1-205ENST00000419442 DDX11Q96FC9 970 aa12.74□□□□□ -0.37
RAPGEF1-205ENST00000419442 TEX13BQ9BXU2 312 aa12.74□□□□□ -0.37
RAPGEF1-205ENST00000419442 SWAP70Q9UH65 585 aa12.74□□□□□ -0.37
RAPGEF1-205ENST00000419442 NOB1Q9ULX3 412 aaKnown RBP12.74□□□□□ -0.37
RAPGEF1-205ENST00000419442 BAZ2AQ9UIF9 1905 aaKnown RBP12.74□□□□□ -0.37
RAPGEF1-205ENST00000419442 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.73□□□□□ -0.37
RAPGEF1-205ENST00000419442 AKR1B1P15121 316 aa12.73□□□□□ -0.37
RAPGEF1-205ENST00000419442 BEX3Q00994 111 aa12.73□□□□□ -0.37
RAPGEF1-205ENST00000419442 LEXMQ3ZCV2 418 aa12.73□□□□□ -0.37
RAPGEF1-205ENST00000419442 SAMD1Q6SPF0 538 aaPredicted RBP12.73□□□□□ -0.37
RAPGEF1-205ENST00000419442 SCLYQ96I15 445 aa12.73□□□□□ -0.37
RAPGEF1-205ENST00000419442 TRPV6Q9H1D0 765 aa12.73□□□□□ -0.37
RAPGEF1-205ENST00000419442 GNEQ9Y223 722 aaKnown RBP12.73□□□□□ -0.37
RAPGEF1-205ENST00000419442 RIPK3Q9Y572 518 aa12.73□□□□□ -0.37
RAPGEF1-205ENST00000419442 TET1Q8NFU7 2136 aa12.73□□□□□ -0.37
RAPGEF1-205ENST00000419442 SIP14410 1827 aa12.72□□□□□ -0.37
RAPGEF1-205ENST00000419442 POTEB3A0JP26 581 aa12.72□□□□□ -0.37
RAPGEF1-205ENST00000419442 ATP2A1O14983 1001 aa12.72□□□□□ -0.37
RAPGEF1-205ENST00000419442 SLFN5Q08AF3 891 aa12.72□□□□□ -0.37
RAPGEF1-205ENST00000419442 POTEBQ6S5H4 581 aa12.72□□□□□ -0.37
RAPGEF1-205ENST00000419442 ARMCX2Q7L311 632 aa12.72□□□□□ -0.37
RAPGEF1-205ENST00000419442 HERC6Q8IVU3 1022 aa12.72□□□□□ -0.37
RAPGEF1-205ENST00000419442 CCDC17Q96LX7 622 aa12.72□□□□□ -0.37
RAPGEF1-205ENST00000419442 UBE2ZQ9H832 354 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF1-205ENST00000419442 MCM9Q9NXL9 1143 aa12.72□□□□□ -0.37
RAPGEF1-205ENST00000419442 DBNLQ9UJU6 430 aaKnown RBP12.72□□□□□ -0.37
RAPGEF1-205ENST00000419442 CYP2D6P10635 497 aa12.71□□□□□ -0.37
RAPGEF1-205ENST00000419442 SNRNP48Q6IEG0 339 aaKnown RBP12.71□□□□□ -0.37
RAPGEF1-205ENST00000419442 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF1-205ENST00000419442 UIMC1Q96RL1 719 aa12.71□□□□□ -0.37
RAPGEF1-205ENST00000419442 ANTXR1Q9H6X2 564 aa12.71□□□□□ -0.37
RAPGEF1-205ENST00000419442 DCP1AQ9NPI6 582 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF1-205ENST00000419442 MAGEB6P1A0A0J9YX57 407 aa12.7□□□□□ -0.38
RAPGEF1-205ENST00000419442 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-205ENST00000419442 GNAI2P04899 355 aa12.7□□□□□ -0.38
RAPGEF1-205ENST00000419442 ACTN1P12814 892 aa12.7□□□□□ -0.38
RAPGEF1-205ENST00000419442 EEF2P13639 858 aaKnown RBP12.7□□□□□ -0.38
RAPGEF1-205ENST00000419442 RFC2P35250 354 aa12.7□□□□□ -0.38
RAPGEF1-205ENST00000419442 TNFAIP2Q03169 654 aa12.7□□□□□ -0.38
RAPGEF1-205ENST00000419442 POLA2Q14181 598 aa12.7□□□□□ -0.38
RAPGEF1-205ENST00000419442 FSCN1Q16658 493 aaKnown RBP12.7□□□□□ -0.38
RAPGEF1-205ENST00000419442 CSPP1Q1MSJ5 1256 aa12.7□□□□□ -0.38
RAPGEF1-205ENST00000419442 FAM83BQ5T0W9 1011 aa12.7□□□□□ -0.38
RAPGEF1-205ENST00000419442 SPRED2Q7Z698 418 aa12.7□□□□□ -0.38
RAPGEF1-205ENST00000419442 CRNKL1Q9BZJ0 848 aaKnown RBP12.7□□□□□ -0.38
RAPGEF1-205ENST00000419442 ALDH8A1Q9H2A2 487 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-205ENST00000419442 TLR7Q9NYK1 1049 aaKnown RBP12.7□□□□□ -0.38
RAPGEF1-205ENST00000419442 SCN10AQ9Y5Y9 1956 aa12.7□□□□□ -0.38
RAPGEF1-205ENST00000419442 KIF28PB7ZC32 967 aa12.69□□□□□ -0.38
RAPGEF1-205ENST00000419442 DCXO43602 365 aa12.69□□□□□ -0.38
RAPGEF1-205ENST00000419442 CT47B1P0C2W7 299 aaPredicted RBP12.69□□□□□ -0.38
RAPGEF1-205ENST00000419442 IL9P15248 144 aa12.69□□□□□ -0.38
RAPGEF1-205ENST00000419442 TLK2Q86UE8 772 aa12.69□□□□□ -0.38
RAPGEF1-205ENST00000419442 CCDC144CPQ8IYA2 1237 aa12.69□□□□□ -0.38
RAPGEF1-205ENST00000419442 ARHGAP45Q92619 1136 aa12.69□□□□□ -0.38
RAPGEF1-205ENST00000419442 DYNLL2Q96FJ2 89 aa12.69□□□□□ -0.38
RAPGEF1-205ENST00000419442 SLF1Q9BQI6 1058 aa12.69□□□□□ -0.38
RAPGEF1-205ENST00000419442 KANSL2Q9H9L4 492 aa12.69□□□□□ -0.38
RAPGEF1-205ENST00000419442 GOPCQ9HD26 462 aa12.69□□□□□ -0.38
RAPGEF1-205ENST00000419442 Q9Y3F1 56 aa12.69□□□□□ -0.38
RAPGEF1-205ENST00000419442 ZEB2O60315 1214 aa12.68□□□□□ -0.38
RAPGEF1-205ENST00000419442 SUPT20HL2P0C7V6 817 aa12.68□□□□□ -0.38
RAPGEF1-205ENST00000419442 SSTR3P32745 418 aaPredicted RBP12.68□□□□□ -0.38
RAPGEF1-205ENST00000419442 PSMC6P62333 389 aa12.68□□□□□ -0.38
RAPGEF1-205ENST00000419442 DEFB128Q7Z7B8 93 aa12.68□□□□□ -0.38
RAPGEF1-205ENST00000419442 TRMT2AQ8IZ69 625 aaKnown RBP12.68□□□□□ -0.38
RAPGEF1-205ENST00000419442 FAM133AQ8N9E0 248 aa12.68□□□□□ -0.38
RAPGEF1-205ENST00000419442 CHST13Q8NET6 341 aa12.68□□□□□ -0.38
RAPGEF1-205ENST00000419442 SDR42E1Q8WUS8 393 aa12.68□□□□□ -0.38
RAPGEF1-205ENST00000419442 FBXO40Q9UH90 709 aa12.68□□□□□ -0.38
RAPGEF1-205ENST00000419442 LCTP09848 1927 aa12.68□□□□□ -0.38
RAPGEF1-205ENST00000419442 MYH4Q9Y623 1939 aa12.68□□□□□ -0.38
RAPGEF1-205ENST00000419442 TNKSO95271 1327 aa12.67□□□□□ -0.38
RAPGEF1-205ENST00000419442 GRXCR2A6NFK2 248 aa12.67□□□□□ -0.38
RAPGEF1-205ENST00000419442 ST18O60284 1047 aa12.67□□□□□ -0.38
RAPGEF1-205ENST00000419442 BAIAP3O94812 1187 aa12.67□□□□□ -0.38
RAPGEF1-205ENST00000419442 CYP2C9P11712 490 aa12.67□□□□□ -0.38
RAPGEF1-205ENST00000419442 SMPD1P17405 629 aa12.67□□□□□ -0.38
RAPGEF1-205ENST00000419442 CDK8P49336 464 aa12.67□□□□□ -0.38
RAPGEF1-205ENST00000419442 PUS10Q3MIT2 529 aaKnown RBP12.67□□□□□ -0.38
RAPGEF1-205ENST00000419442 ANKRD35Q8N283 1001 aa12.67□□□□□ -0.38
RAPGEF1-205ENST00000419442 PRPF38AQ8NAV1 312 aaKnown RBP12.67□□□□□ -0.38
RAPGEF1-205ENST00000419442 SSH3Q8TE77 659 aa12.67□□□□□ -0.38
RAPGEF1-205ENST00000419442 GDPD5Q8WTR4 605 aa12.67□□□□□ -0.38
RAPGEF1-205ENST00000419442 EAF2Q96CJ1 260 aaPredicted RBP12.67□□□□□ -0.38
RAPGEF1-205ENST00000419442 AP5M1Q9H0R1 490 aa12.67□□□□□ -0.38
RAPGEF1-205ENST00000419442 TRMT13Q9NUP7 481 aaKnown RBP12.67□□□□□ -0.38
RAPGEF1-205ENST00000419442 NOP58Q9Y2X3 529 aaKnown RBP12.67□□□□□ -0.38
RAPGEF1-205ENST00000419442 TRIP12Q14669 1992 aaPredicted RBP12.67□□□□□ -0.38
RAPGEF1-205ENST00000419442 ZNF536O15090 1300 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms