RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 REPS2Q8NFH8 660 aa12.36□□□□□ -0.43
RFC1-203ENST00000418436 NCOA7Q8NI08 942 aa12.36□□□□□ -0.43
RFC1-203ENST00000418436 DCAF4Q8WV16 495 aa12.36□□□□□ -0.43
RFC1-203ENST00000418436 ZDHHC16Q969W1 377 aa12.36□□□□□ -0.43
RFC1-203ENST00000418436 COA7Q96BR5 231 aa12.36□□□□□ -0.43
RFC1-203ENST00000418436 SLF1Q9BQI6 1058 aa12.36□□□□□ -0.43
RFC1-203ENST00000418436 GJD2Q9UKL4 321 aa12.36□□□□□ -0.43
RFC1-203ENST00000418436 GABRQQ9UN88 632 aa12.36□□□□□ -0.43
RFC1-203ENST00000418436 PTCH2Q9Y6C5 1203 aa12.36□□□□□ -0.43
RFC1-203ENST00000418436 SNHG28P0DPA3 235 aa12.35□□□□□ -0.43
RFC1-203ENST00000418436 SLC1A4P43007 532 aa12.35□□□□□ -0.43
RFC1-203ENST00000418436 FLT3LGP49771 235 aa12.35□□□□□ -0.43
RFC1-203ENST00000418436 PRKCZQ05513 592 aa12.35□□□□□ -0.43
RFC1-203ENST00000418436 IRF5Q13568 498 aa12.35□□□□□ -0.43
RFC1-203ENST00000418436 TMEM132BQ14DG7 1078 aa12.35□□□□□ -0.43
RFC1-203ENST00000418436 SEC23AQ15436 765 aa12.35□□□□□ -0.43
RFC1-203ENST00000418436 MB21D2Q8IYB1 491 aaPredicted RBP12.35□□□□□ -0.43
RFC1-203ENST00000418436 SHCBP1Q8NEM2 672 aa12.35□□□□□ -0.43
RFC1-203ENST00000418436 MOV10L1Q9BXT6 1211 aaKnown RBP12.35□□□□□ -0.43
RFC1-203ENST00000418436 SPATC1LQ9H0A9 340 aa12.35□□□□□ -0.43
RFC1-203ENST00000418436 WDR70Q9NW82 654 aa12.35□□□□□ -0.43
RFC1-203ENST00000418436 ZNFX1Q9P2E3 1918 aaKnown RBP12.35□□□□□ -0.43
RFC1-203ENST00000418436 TNKSO95271 1327 aa12.35□□□□□ -0.43
RFC1-203ENST00000418436 TMEM232C9JQI7 657 aa12.34□□□□□ -0.43
RFC1-203ENST00000418436 ATP2A1O14983 1001 aa12.34□□□□□ -0.43
RFC1-203ENST00000418436 FDX1P10109 184 aa12.34□□□□□ -0.43
RFC1-203ENST00000418436 PDHBP11177 359 aa12.34□□□□□ -0.43
RFC1-203ENST00000418436 STAT2P52630 851 aa12.34□□□□□ -0.43
RFC1-203ENST00000418436 E2F4Q16254 413 aa12.34□□□□□ -0.43
RFC1-203ENST00000418436 TSGA10IPQ3SY00 556 aa12.34□□□□□ -0.43
RFC1-203ENST00000418436 BTNL9Q6UXG8 535 aa12.34□□□□□ -0.43
RFC1-203ENST00000418436 KCTD1Q719H9 257 aa12.34□□□□□ -0.43
RFC1-203ENST00000418436 RASGRP2Q7LDG7 609 aa12.34□□□□□ -0.43
RFC1-203ENST00000418436 GPR142Q7Z601 462 aa12.34□□□□□ -0.43
RFC1-203ENST00000418436 PLEKHH3Q7Z736 793 aa12.34□□□□□ -0.43
RFC1-203ENST00000418436 RALYLQ86SE5 291 aaKnown RBP12.34□□□□□ -0.43
RFC1-203ENST00000418436 FAM160B2Q86V87 743 aa12.34□□□□□ -0.43
RFC1-203ENST00000418436 CHURC1Q8WUH1 139 aa12.34□□□□□ -0.43
RFC1-203ENST00000418436 USP6NLQ92738 828 aa12.34□□□□□ -0.43
RFC1-203ENST00000418436 KCNB2Q92953 911 aa12.34□□□□□ -0.43
RFC1-203ENST00000418436 ARMC5Q96C12 935 aa12.34□□□□□ -0.43
RFC1-203ENST00000418436 UBAC1Q9BSL1 405 aa12.34□□□□□ -0.43
RFC1-203ENST00000418436 ZNF214Q9UL59 606 aaPredicted RBP12.34□□□□□ -0.43
RFC1-203ENST00000418436 ZNF236Q9UL36 1845 aa12.34□□□□□ -0.43
RFC1-203ENST00000418436 EPB41L2O43491 1005 aaKnown RBP12.33□□□□□ -0.44
RFC1-203ENST00000418436 ANTXR2P58335 489 aa12.33□□□□□ -0.44
RFC1-203ENST00000418436 MORN1Q5T089 497 aa12.33□□□□□ -0.44
RFC1-203ENST00000418436 RNF20Q5VTR2 975 aa12.33□□□□□ -0.44
RFC1-203ENST00000418436 RIOX2Q8IUF8 465 aa12.33□□□□□ -0.44
RFC1-203ENST00000418436 PNMA1Q8ND90 353 aa12.33□□□□□ -0.44
RFC1-203ENST00000418436 RAET1EQ8TD07 263 aa12.33□□□□□ -0.44
RFC1-203ENST00000418436 PXYLP1Q8TE99 480 aa12.33□□□□□ -0.44
RFC1-203ENST00000418436 KIFC2Q96AC6 838 aa12.33□□□□□ -0.44
RFC1-203ENST00000418436 MTA3Q9BTC8 594 aa12.33□□□□□ -0.44
RFC1-203ENST00000418436 MROH8Q9H579 483 aa12.33□□□□□ -0.44
RFC1-203ENST00000418436 KAT14Q9H8E8 782 aa12.33□□□□□ -0.44
RFC1-203ENST00000418436 SLC38A10Q9HBR0 1119 aa12.33□□□□□ -0.44
RFC1-203ENST00000418436 PCDHGA10Q9Y5H3 936 aa12.33□□□□□ -0.44
RFC1-203ENST00000418436 SLC15A5A6NIM6 579 aa12.32□□□□□ -0.44
RFC1-203ENST00000418436 ZBED4O75132 1171 aa12.32□□□□□ -0.44
RFC1-203ENST00000418436 REC8O95072 547 aa12.32□□□□□ -0.44
RFC1-203ENST00000418436 SLC25A27O95847 323 aa12.32□□□□□ -0.44
RFC1-203ENST00000418436 ERCC3P19447 782 aa12.32□□□□□ -0.44
RFC1-203ENST00000418436 PTPREP23469 700 aa12.32□□□□□ -0.44
RFC1-203ENST00000418436 STAT3P40763 770 aa12.32□□□□□ -0.44
RFC1-203ENST00000418436 OAZ1P54368 228 aa12.32□□□□□ -0.44
RFC1-203ENST00000418436 ZNF543Q08ER8 600 aa12.32□□□□□ -0.44
RFC1-203ENST00000418436 COL9A3Q14050 684 aaPredicted RBP12.32□□□□□ -0.44
RFC1-203ENST00000418436 IFIT1BQ5T764 474 aaKnown RBP12.32□□□□□ -0.44
RFC1-203ENST00000418436 TTBK2Q6IQ55 1244 aa12.32□□□□□ -0.44
RFC1-203ENST00000418436 CCAR1Q8IX12 1150 aaKnown RBP12.32□□□□□ -0.44
RFC1-203ENST00000418436 IGDCC4Q8TDY8 1250 aa12.32□□□□□ -0.44
RFC1-203ENST00000418436 SOCS4Q8WXH5 440 aa12.32□□□□□ -0.44
RFC1-203ENST00000418436 CHMP4CQ96CF2 233 aa12.32□□□□□ -0.44
RFC1-203ENST00000418436 NUDT12Q9BQG2 462 aa12.32□□□□□ -0.44
RFC1-203ENST00000418436 ADAM33Q9BZ11 813 aa12.32□□□□□ -0.44
RFC1-203ENST00000418436 TSHZ2Q9NRE2 1034 aa12.32□□□□□ -0.44
RFC1-203ENST00000418436 PRR12Q9ULL5 1215 aa12.32□□□□□ -0.44
RFC1-203ENST00000418436 MTMR7Q9Y216 660 aa12.32□□□□□ -0.44
RFC1-203ENST00000418436 RBBP6Q7Z6E9 1792 aaKnown RBP12.32□□□□□ -0.44
RFC1-203ENST00000418436 IFIT3O14879 490 aaKnown RBP12.31□□□□□ -0.44
RFC1-203ENST00000418436 STRNO43815 780 aa12.31□□□□□ -0.44
RFC1-203ENST00000418436 ADCY3O60266 1144 aa12.31□□□□□ -0.44
RFC1-203ENST00000418436 XRCC5P13010 732 aaKnown RBP12.31□□□□□ -0.44
RFC1-203ENST00000418436 GRK4P32298 578 aa12.31□□□□□ -0.44
RFC1-203ENST00000418436 MCM5P33992 734 aa12.31□□□□□ -0.44
RFC1-203ENST00000418436 HSPA4P34932 840 aa12.31□□□□□ -0.44
RFC1-203ENST00000418436 COPB2P35606 906 aa12.31□□□□□ -0.44
RFC1-203ENST00000418436 GRB14Q14449 540 aa12.31□□□□□ -0.44
RFC1-203ENST00000418436 PLS1Q14651 629 aa12.31□□□□□ -0.44
RFC1-203ENST00000418436 CCDC96Q2M329 555 aa12.31□□□□□ -0.44
RFC1-203ENST00000418436 SLC9C1Q4G0N8 1177 aa12.31□□□□□ -0.44
RFC1-203ENST00000418436 GPATCH4Q5T3I0 446 aaKnown RBP12.31□□□□□ -0.44
RFC1-203ENST00000418436 IFFO2Q5TF58 517 aa12.31□□□□□ -0.44
RFC1-203ENST00000418436 CHST3Q7LGC8 479 aa12.31□□□□□ -0.44
RFC1-203ENST00000418436 NBPF11Q86T75 865 aa12.31□□□□□ -0.44
RFC1-203ENST00000418436 ZNF333Q96JL9 665 aa12.31□□□□□ -0.44
RFC1-203ENST00000418436 TEX13BQ9BXU2 312 aa12.31□□□□□ -0.44
RFC1-203ENST00000418436 ARIH1Q9Y4X5 557 aaPredicted RBP12.31□□□□□ -0.44
RFC1-203ENST00000418436 ZNF536O15090 1300 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms