RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 GMCL1Q96IK5 515 aa16.73■□□□□ 0.27
LINC01006-202ENST00000418309 FAM227BQ96M60 508 aa16.73■□□□□ 0.27
LINC01006-202ENST00000418309 RWDD1Q9H446 243 aaPredicted RBP16.73■□□□□ 0.27
LINC01006-202ENST00000418309 IL17RBQ9NRM6 502 aa16.73■□□□□ 0.27
LINC01006-202ENST00000418309 TLE2Q04725 743 aa16.72■□□□□ 0.27
LINC01006-202ENST00000418309 ACVR2BQ13705 512 aa16.72■□□□□ 0.27
LINC01006-202ENST00000418309 ALX1Q15699 326 aa16.72■□□□□ 0.27
LINC01006-202ENST00000418309 RCSD1Q6JBY9 416 aa16.72■□□□□ 0.27
LINC01006-202ENST00000418309 ZNF467Q7Z7K2 595 aaPredicted RBP16.72■□□□□ 0.27
LINC01006-202ENST00000418309 AGBL1Q96MI9 1066 aa16.72■□□□□ 0.27
LINC01006-202ENST00000418309 ACAD9Q9H845 621 aa16.72■□□□□ 0.27
LINC01006-202ENST00000418309 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.72■□□□□ 0.27
LINC01006-202ENST00000418309 ANAPC4Q9UJX5 808 aa16.72■□□□□ 0.27
LINC01006-202ENST00000418309 A0A0D9SFI3 127 aa16.71■□□□□ 0.27
LINC01006-202ENST00000418309 A0A1W2PQ45 241 aaPredicted RBP16.71■□□□□ 0.27
LINC01006-202ENST00000418309 A0A1W2PQY0 241 aa16.71■□□□□ 0.27
LINC01006-202ENST00000418309 FGAP02671 866 aa16.71■□□□□ 0.27
LINC01006-202ENST00000418309 ALAS1P13196 640 aa16.71■□□□□ 0.27
LINC01006-202ENST00000418309 SNAP25P60880 206 aa16.71■□□□□ 0.27
LINC01006-202ENST00000418309 AAMPQ13685 434 aa16.71■□□□□ 0.27
LINC01006-202ENST00000418309 CCDC96Q2M329 555 aa16.71■□□□□ 0.27
LINC01006-202ENST00000418309 C1orf53Q5VUE5 145 aa16.71■□□□□ 0.27
LINC01006-202ENST00000418309 CCDC174Q6PII3 467 aa16.71■□□□□ 0.27
LINC01006-202ENST00000418309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.71■□□□□ 0.27
LINC01006-202ENST00000418309 SH3RF1Q7Z6J0 888 aa16.71■□□□□ 0.27
LINC01006-202ENST00000418309 BADQ92934 168 aa16.71■□□□□ 0.27
LINC01006-202ENST00000418309 ABHD16BQ9H3Z7 469 aa16.71■□□□□ 0.27
LINC01006-202ENST00000418309 PDLIM7Q9NR12 457 aa16.71■□□□□ 0.27
LINC01006-202ENST00000418309 RNF146Q9NTX7 359 aa16.71■□□□□ 0.27
LINC01006-202ENST00000418309 TACC3Q9Y6A5 838 aa16.71■□□□□ 0.27
LINC01006-202ENST00000418309 MCM3APO60318 1980 aa16.7■□□□□ 0.26
LINC01006-202ENST00000418309 POTEB2H3BUK9 544 aa16.7■□□□□ 0.26
LINC01006-202ENST00000418309 ORC4O43929 436 aa16.7■□□□□ 0.26
LINC01006-202ENST00000418309 PQBP1O60828 265 aaKnown RBP16.7■□□□□ 0.26
LINC01006-202ENST00000418309 ADAMTS4O75173 837 aa16.7■□□□□ 0.26
LINC01006-202ENST00000418309 CNTN2Q02246 1040 aa16.7■□□□□ 0.26
LINC01006-202ENST00000418309 NMIQ13287 307 aaPredicted RBP16.7■□□□□ 0.26
LINC01006-202ENST00000418309 KCNA10Q16322 511 aa16.7■□□□□ 0.26
LINC01006-202ENST00000418309 ARMCX2Q7L311 632 aa16.7■□□□□ 0.26
LINC01006-202ENST00000418309 NUP133Q8WUM0 1156 aa16.7■□□□□ 0.26
LINC01006-202ENST00000418309 TRERF1Q96PN7 1200 aa16.7■□□□□ 0.26
LINC01006-202ENST00000418309 TSEN34Q9BSV6 310 aaKnown RBP16.7■□□□□ 0.26
LINC01006-202ENST00000418309 SPC25Q9HBM1 224 aa16.7■□□□□ 0.26
LINC01006-202ENST00000418309 SYNRGQ9UMZ2 1314 aa16.7■□□□□ 0.26
LINC01006-202ENST00000418309 TRIM43BA6NCK2 446 aa16.69■□□□□ 0.26
LINC01006-202ENST00000418309 PLA2G6O60733 806 aa16.69■□□□□ 0.26
LINC01006-202ENST00000418309 DUSP11O75319 330 aaKnown RBP16.69■□□□□ 0.26
LINC01006-202ENST00000418309 CLTBP09497 229 aa16.69■□□□□ 0.26
LINC01006-202ENST00000418309 C6orf222P0C671 652 aaPredicted RBP16.69■□□□□ 0.26
LINC01006-202ENST00000418309 HSPD1P10809 573 aaKnown RBP16.69■□□□□ 0.26
LINC01006-202ENST00000418309 ACLYP53396 1101 aa16.69■□□□□ 0.26
LINC01006-202ENST00000418309 HAND2P61296 217 aa16.69■□□□□ 0.26
LINC01006-202ENST00000418309 TKFCQ3LXA3 575 aa16.69■□□□□ 0.26
LINC01006-202ENST00000418309 CCDC144BQ3MJ40 725 aa16.69■□□□□ 0.26
LINC01006-202ENST00000418309 TICAM2Q86XR7 235 aa16.69■□□□□ 0.26
LINC01006-202ENST00000418309 CCDC144CPQ8IYA2 1237 aa16.69■□□□□ 0.26
LINC01006-202ENST00000418309 SLC17A8Q8NDX2 589 aa16.69■□□□□ 0.26
LINC01006-202ENST00000418309 VTI1AQ96AJ9 217 aa16.69■□□□□ 0.26
LINC01006-202ENST00000418309 TRIM43Q96BQ3 446 aaPredicted RBP16.69■□□□□ 0.26
LINC01006-202ENST00000418309 STARD7Q9NQZ5 370 aa16.69■□□□□ 0.26
LINC01006-202ENST00000418309 PRR12Q9ULL5 1215 aa16.69■□□□□ 0.26
LINC01006-202ENST00000418309 ZNF536O15090 1300 aa16.69■□□□□ 0.26
LINC01006-202ENST00000418309 FGRP09769 529 aa16.68■□□□□ 0.26
LINC01006-202ENST00000418309 SHHQ15465 462 aa16.68■□□□□ 0.26
LINC01006-202ENST00000418309 NOL8Q76FK4 1167 aaKnown RBP16.68■□□□□ 0.26
LINC01006-202ENST00000418309 RASGRP2Q7LDG7 609 aa16.68■□□□□ 0.26
LINC01006-202ENST00000418309 ZNF589Q86UQ0 364 aaPredicted RBP16.68■□□□□ 0.26
LINC01006-202ENST00000418309 KLHDC9Q8NEP7 349 aa16.68■□□□□ 0.26
LINC01006-202ENST00000418309 DCAF4Q8WV16 495 aa16.68■□□□□ 0.26
LINC01006-202ENST00000418309 FGD4Q96M96 766 aa16.68■□□□□ 0.26
LINC01006-202ENST00000418309 A1CFQ9NQ94 594 aaKnown RBP16.68■□□□□ 0.26
LINC01006-202ENST00000418309 LAMA3Q16787 3333 aa16.68■□□□□ 0.26
LINC01006-202ENST00000418309 LTBP2Q14767 1821 aa16.68■□□□□ 0.26
LINC01006-202ENST00000418309 MYADML2A6NDP7 307 aa16.67■□□□□ 0.26
LINC01006-202ENST00000418309 MOXD2PA6NHM9 499 aa16.67■□□□□ 0.26
LINC01006-202ENST00000418309 ASB14A6NK59 587 aa16.67■□□□□ 0.26
LINC01006-202ENST00000418309 DCDC2CA8MYV0 355 aa16.67■□□□□ 0.26
LINC01006-202ENST00000418309 TOP1P11387 765 aaKnown RBP16.67■□□□□ 0.26
LINC01006-202ENST00000418309 RAG1P15918 1043 aa16.67■□□□□ 0.26
LINC01006-202ENST00000418309 MFAP1P55081 439 aaKnown RBP16.67■□□□□ 0.26
LINC01006-202ENST00000418309 MFSD6Q6ZSS7 791 aa16.67■□□□□ 0.26
LINC01006-202ENST00000418309 CHD1LQ86WJ1 897 aa16.67■□□□□ 0.26
LINC01006-202ENST00000418309 SMC5Q8IY18 1101 aa16.67■□□□□ 0.26
LINC01006-202ENST00000418309 FAM133AQ8N9E0 248 aa16.67■□□□□ 0.26
LINC01006-202ENST00000418309 PCSK9Q8NBP7 692 aaKnown RBP16.67■□□□□ 0.26
LINC01006-202ENST00000418309 GLT1D1Q96MS3 346 aa16.67■□□□□ 0.26
LINC01006-202ENST00000418309 GPCPD1Q9NPB8 672 aa16.67■□□□□ 0.26
LINC01006-202ENST00000418309 TMEM39AQ9NV64 488 aa16.67■□□□□ 0.26
LINC01006-202ENST00000418309 MTMR10Q9NXD2 777 aa16.67■□□□□ 0.26
LINC01006-202ENST00000418309 CCPG1Q9ULG6 757 aa16.67■□□□□ 0.26
LINC01006-202ENST00000418309 CCDC171Q6TFL3 1326 aa16.67■□□□□ 0.26
LINC01006-202ENST00000418309 SOWAHBA6NEL2 793 aa16.66■□□□□ 0.26
LINC01006-202ENST00000418309 IGHDP01880 384 aa16.66■□□□□ 0.26
LINC01006-202ENST00000418309 SDSP20132 328 aa16.66■□□□□ 0.26
LINC01006-202ENST00000418309 SLC16A2P36021 539 aa16.66■□□□□ 0.26
LINC01006-202ENST00000418309 IRX5P78411 483 aaPredicted RBP16.66■□□□□ 0.26
LINC01006-202ENST00000418309 MUM1L1Q5H9M0 696 aa16.66■□□□□ 0.26
LINC01006-202ENST00000418309 GNASQ5JWF2 1037 aa16.66■□□□□ 0.26
LINC01006-202ENST00000418309 C9orf50Q5SZB4 431 aa16.66■□□□□ 0.26
LINC01006-202ENST00000418309 TTBK2Q6IQ55 1244 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms