RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PLEKHA4Q9H4M7 779 aa12.31□□□□□ -0.44
PTCH1-205ENST00000418258 POLR2BP30876 1174 aaKnown RBP12.31□□□□□ -0.44
PTCH1-205ENST00000418258 TSKSQ9UJT2 592 aa12.31□□□□□ -0.44
PTCH1-205ENST00000418258 PARD3Q8TEW0 1356 aa12.31□□□□□ -0.44
PTCH1-205ENST00000418258 ZSCAN20P17040 1043 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-205ENST00000418258 MTX1Q13505 466 aa12.31□□□□□ -0.44
PTCH1-205ENST00000418258 TUBB2AQ13885 445 aa12.31□□□□□ -0.44
PTCH1-205ENST00000418258 RSRC2Q7L4I2 434 aaKnown RBP12.31□□□□□ -0.44
PTCH1-205ENST00000418258 METTL23Q86XA0 190 aa12.31□□□□□ -0.44
PTCH1-205ENST00000418258 NLGN1Q8N2Q7 840 aa12.31□□□□□ -0.44
PTCH1-205ENST00000418258 TUBB2BQ9BVA1 445 aa12.31□□□□□ -0.44
PTCH1-205ENST00000418258 ZNF804BA4D1E1 1349 aa12.31□□□□□ -0.44
PTCH1-205ENST00000418258 N4BP1O75113 896 aaKnown RBP12.31□□□□□ -0.44
PTCH1-205ENST00000418258 PCK1P35558 622 aa12.31□□□□□ -0.44
PTCH1-205ENST00000418258 TFDP1Q14186 410 aa12.31□□□□□ -0.44
PTCH1-205ENST00000418258 IFNL3Q8IZI9 196 aa12.31□□□□□ -0.44
PTCH1-205ENST00000418258 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
PTCH1-205ENST00000418258 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
PTCH1-205ENST00000418258 RBBP5Q15291 538 aaKnown RBP12.31□□□□□ -0.44
PTCH1-205ENST00000418258 RSRC1Q96IZ7 334 aaKnown RBP12.31□□□□□ -0.44
PTCH1-205ENST00000418258 DSCC1Q9BVC3 393 aa12.31□□□□□ -0.44
PTCH1-205ENST00000418258 PNMA2Q9UL42 364 aa12.31□□□□□ -0.44
PTCH1-205ENST00000418258 GOLGA8CPA6NN73 597 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 JAK2O60674 1132 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 TRMT44Q8IYL2 757 aaKnown RBP12.3□□□□□ -0.44
PTCH1-205ENST00000418258 ARHGAP24Q8N264 748 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 P3H4Q92791 437 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 GPKOWQ92917 476 aaPredicted RBP eCLIP12.3□□□□□ -0.44
PTCH1-205ENST00000418258 GBP6Q6ZN66 633 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 SMC5Q8IY18 1101 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 PPM1KQ8N3J5 372 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 KIF3CO14782 793 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 XPOTO43592 962 aaKnown RBP12.3□□□□□ -0.44
PTCH1-205ENST00000418258 CHRNDQ07001 517 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 TTBK2Q6IQ55 1244 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 ANKRD36BP1Q96IX9 119 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 RIC8AQ9NPQ8 531 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 PIK3C2GO75747 1445 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 CROCCP2Q86T23 111 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 VSIG1Q86XK7 387 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 SLF1Q9BQI6 1058 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 TXNDC9O14530 226 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 SGSM2O43147 1006 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 FAM173BQ6P4H8 233 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-205ENST00000418258 DCLK2Q8N568 766 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 GBP7Q8N8V2 638 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-205ENST00000418258 ECE1P42892 770 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 SLFN13Q68D06 897 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 NEK8Q86SG6 692 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 LMCD1Q9NZU5 365 aa12.3□□□□□ -0.44
PTCH1-205ENST00000418258 NUP153P49790 1475 aaKnown RBP12.29□□□□□ -0.44
PTCH1-205ENST00000418258 C8orf34Q49A92 452 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 LRCH2Q5VUJ6 765 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 NLRP7Q8WX94 980 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 IMPACTQ9P2X3 320 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 LMNB1P20700 586 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 CPSF3Q9UKF6 684 aaKnown RBP12.29□□□□□ -0.44
PTCH1-205ENST00000418258 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.29□□□□□ -0.44
PTCH1-205ENST00000418258 NDUFAB1O14561 156 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 ADCY8P40145 1251 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 PPP2R5AQ15172 486 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 ADD3Q9UEY8 706 aaKnown RBP12.29□□□□□ -0.44
PTCH1-205ENST00000418258 PCDHB4Q9Y5E5 795 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 PAK2Q13177 524 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 MIS18BP1Q6P0N0 1132 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 KCTD1Q719H9 257 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 SNX25Q9H3E2 840 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 PCDHA1Q9Y5I3 950 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 LOC102724428A0A0B4J2F2 783 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 S100BP04271 92 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-205ENST00000418258 SIK1P57059 783 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 PTPROQ16827 1216 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 USPL1Q5W0Q7 1092 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 ZNF449Q6P9G9 518 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 MIPOL1Q8TD10 442 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 ARMCX3Q9UH62 379 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-205ENST00000418258 RNF8O76064 485 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 SLC4A1P02730 911 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 KRT3P12035 628 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 VPS41P49754 854 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 ANKRD20A3Q5VUR7 823 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 GRK7Q8WTQ7 553 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 GCNAQ96QF7 691 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 ZNF577Q9BSK1 485 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 UBN1Q9NPG3 1134 aa12.29□□□□□ -0.44
PTCH1-205ENST00000418258 XDHP47989 1333 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 ARPP19P56211 112 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 PPP1R12CQ9BZL4 782 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 KCNJ18B7U540 433 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 OR52Z1P0C646 297 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 CYP4A11Q02928 519 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 KCNJ12Q14500 433 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 TTLL7Q6ZT98 887 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 TTC30AQ86WT1 665 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 RABGAP1Q9Y3P9 1069 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 INO80B-WBP1J3KQ70 363 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 CRKLP46109 303 aaKnown RBP12.28□□□□□ -0.44
PTCH1-205ENST00000418258 MORC3Q14149 939 aa12.28□□□□□ -0.44
PTCH1-205ENST00000418258 FAM196AQ6ZSG2 479 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms