RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 GYG2O15488 501 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 PECAM1P16284 738 aaPredicted RBP11.25□□□□□ -0.61
SATB1-204ENST00000417717 ARPC4P59998 168 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 RAPGEF1Q13905 1077 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 DNAJC9Q8WXX5 260 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 RWDD3Q9Y3V2 267 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 CTIFO43310 598 aaKnown RBP11.25□□□□□ -0.61
SATB1-204ENST00000417717 ICA1Q05084 483 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 MED21Q13503 144 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 HORMAD1Q86X24 394 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 CCT6BQ92526 530 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 RAD21L1Q9H4I0 556 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 VIPAS39Q9H9C1 493 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 KIAA1468Q9P260 1216 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 SEPT3Q9UH03 358 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 KRT3P12035 628 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 ZNF76P36508 570 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 SMTNP53814 917 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 LONRF3Q496Y0 759 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 TMC5Q6UXY8 1006 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 PPP1R14BQ96C90 147 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 SLC26A6Q9BXS9 759 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 KRT23Q9C075 422 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 WARS2Q9UGM6 360 aaKnown RBP11.25□□□□□ -0.61
SATB1-204ENST00000417717 NOVA2Q9UNW9 492 aaKnown RBP11.25□□□□□ -0.61
SATB1-204ENST00000417717 TRAF3IP3Q9Y228 551 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 KDM6BO15054 1643 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 KLF18A0A0U1RQI7 1052 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 GOLGA8IPA6NC78 632 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 HNRNPCL1O60812 293 aaKnown RBP11.25□□□□□ -0.61
SATB1-204ENST00000417717 HEXIM1O94992 359 aaKnown RBP11.25□□□□□ -0.61
SATB1-204ENST00000417717 TRIM16O95361 564 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 MRPS25P82663 173 aaKnown RBP11.25□□□□□ -0.61
SATB1-204ENST00000417717 KPNB1Q14974 876 aaKnown RBP11.25□□□□□ -0.61
SATB1-204ENST00000417717 CYTH2Q99418 400 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 NAPBQ9H115 298 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 TMEM60Q9H2L4 133 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 ETNK1Q9HBU6 452 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 CCPG1Q9ULG6 757 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 ZNF202O95125 648 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 VIL1P09327 827 aaKnown RBP11.24□□□□□ -0.61
SATB1-204ENST00000417717 NUGGCQ68CJ6 796 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 ICA1LQ8NDH6 482 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 TTLL11Q8NHH1 800 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 POLR3CQ9BUI4 534 aaPredicted RBP11.24□□□□□ -0.61
SATB1-204ENST00000417717 EPN1Q9Y6I3 576 aaPredicted RBP11.24□□□□□ -0.61
SATB1-204ENST00000417717 UNC13BO14795 1591 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 SUPT3HO75486 399 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 RHOBTB1O94844 696 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 RBM6P78332 1123 aaKnown RBP11.24□□□□□ -0.61
SATB1-204ENST00000417717 KIF23Q02241 960 aaPredicted RBP11.24□□□□□ -0.61
SATB1-204ENST00000417717 IDI1Q13907 227 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 TRIM16LQ309B1 348 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 TRAF7Q6Q0C0 670 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 MRRFQ96E11 262 aaKnown RBP11.24□□□□□ -0.61
SATB1-204ENST00000417717 SUCLA2Q9P2R7 463 aaPredicted RBP11.24□□□□□ -0.61
SATB1-204ENST00000417717 KCNH3Q9ULD8 1083 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 ABCA9Q8IUA7 1624 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 NSD2O96028 1365 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 NOS1P29475 1434 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 EIF3HO15372 352 aaKnown RBP eCLIP11.24□□□□□ -0.61
SATB1-204ENST00000417717 PPP1R37O75864 691 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 ACADSP16219 412 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 ITGB3BPQ13352 177 aaPredicted RBP11.24□□□□□ -0.61
SATB1-204ENST00000417717 MICU3Q86XE3 530 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 CCDC82Q8N4S0 544 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 ENOX1Q8TC92 643 aaKnown RBP11.24□□□□□ -0.61
SATB1-204ENST00000417717 ASCC2Q9H1I8 757 aaPredicted RBP11.24□□□□□ -0.61
SATB1-204ENST00000417717 SLC40A1Q9NP59 571 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 SYBUQ9NX95 663 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 TLK1Q9UKI8 766 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 ZMYND8Q9ULU4 1186 aaPredicted RBP11.24□□□□□ -0.61
SATB1-204ENST00000417717 MINK1Q8N4C8 1332 aaPredicted RBP11.24□□□□□ -0.61
SATB1-204ENST00000417717 SBNO1A3KN83 1393 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 PTPRTO14522 1441 aa11.24□□□□□ -0.61
SATB1-204ENST00000417717 EIF4E1BA6NMX2 242 aaKnown RBP11.23□□□□□ -0.61
SATB1-204ENST00000417717 HNRNPCL2B2RXH8 293 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 NVLO15381 856 aaKnown RBP11.23□□□□□ -0.61
SATB1-204ENST00000417717 AHCYL1O43865 530 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 S100A1P23297 94 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 ROR2Q01974 943 aaKnown RBP11.23□□□□□ -0.61
SATB1-204ENST00000417717 GOLGA8FQ08AF8 430 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 GOLGA8DPQ0D2H9 430 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 PDXDC1Q6P996 788 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 CATIPQ7Z7H3 387 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 LLPHQ9BRT6 129 aaKnown RBP11.23□□□□□ -0.61
SATB1-204ENST00000417717 ZBED2Q9BTP6 218 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 VPS37BQ9H9H4 285 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 HAUS2Q9NVX0 235 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 SPATA31E1Q6ZUB1 1445 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 MAGEA13PA6NCF6 341 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 MLH1P40692 756 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 TBL3Q12788 808 aaKnown RBP11.23□□□□□ -0.61
SATB1-204ENST00000417717 PAK1Q13153 545 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 TMED8Q6PL24 325 aaPredicted RBP11.23□□□□□ -0.61
SATB1-204ENST00000417717 SYT2Q8N9I0 419 aaPredicted RBP11.23□□□□□ -0.61
SATB1-204ENST00000417717 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.23□□□□□ -0.61
SATB1-204ENST00000417717 EPB41L5Q9HCM4 733 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 CARD8Q9Y2G2 431 aa11.23□□□□□ -0.61
SATB1-204ENST00000417717 IQGAP3Q86VI3 1631 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms