RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 A0A1B0GUL6 1792 aa16.27■□□□□ 0.2
HDAC9-208ENST00000417496 N4BP1O75113 896 aaKnown RBP16.27■□□□□ 0.2
HDAC9-208ENST00000417496 NFIXQ14938 502 aa16.27■□□□□ 0.2
HDAC9-208ENST00000417496 TXNRD1Q16881 649 aa16.27■□□□□ 0.2
HDAC9-208ENST00000417496 LETM2Q2VYF4 491 aa16.27■□□□□ 0.2
HDAC9-208ENST00000417496 FAM182BQ5T319 152 aa16.27■□□□□ 0.2
HDAC9-208ENST00000417496 JAKMIP3Q5VZ66 844 aa16.27■□□□□ 0.2
HDAC9-208ENST00000417496 GPIHBP1Q8IV16 184 aa16.27■□□□□ 0.2
HDAC9-208ENST00000417496 OR8K1Q8NGG5 319 aa16.27■□□□□ 0.2
HDAC9-208ENST00000417496 TMEM47Q9BQJ4 181 aa16.27■□□□□ 0.2
HDAC9-208ENST00000417496 PYM1Q9BRP8 204 aaKnown RBP16.27■□□□□ 0.2
HDAC9-208ENST00000417496 PDE11AQ9HCR9 933 aa16.27■□□□□ 0.2
HDAC9-208ENST00000417496 LUC7L2Q9Y383 392 aaKnown RBP16.27■□□□□ 0.2
HDAC9-208ENST00000417496 STXBP3O00186 592 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 LDHBP07195 334 aaKnown RBP16.26■□□□□ 0.19
HDAC9-208ENST00000417496 HNRNPH2P55795 449 aaKnown RBP16.26■□□□□ 0.19
HDAC9-208ENST00000417496 GRM4Q14833 912 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 ZNF444Q8N0Y2 327 aaPredicted RBP16.26■□□□□ 0.19
HDAC9-208ENST00000417496 TRERF1Q96PN7 1200 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 ANKRD2Q9GZV1 360 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 SPATA31A5Q5VU36 1347 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 SPATA31A7Q8IWB4 1347 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 CTAGE15A4D2H0 777 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 LGALS16A8MUM7 142 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 ZBTB22O15209 634 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 GNPATO15228 680 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 CTAGE8P0CG41 777 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 FCER1AP12319 257 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 PLCG1P19174 1290 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 STK4Q13043 487 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 BRD3Q15059 726 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 CTAGE6Q86UF2 777 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 CTAGE4Q8IX94 777 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 ZNF507Q8TCN5 953 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 KBTBD4Q9NVX7 518 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 BARHL2Q9NY43 387 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 MYO6Q9UM54 1294 aa16.26■□□□□ 0.19
HDAC9-208ENST00000417496 KLRF2D3W0D1 207 aa16.25■□□□□ 0.19
HDAC9-208ENST00000417496 MAP2K7O14733 419 aa16.25■□□□□ 0.19
HDAC9-208ENST00000417496 CCNT1O60563 726 aaKnown RBP16.25■□□□□ 0.19
HDAC9-208ENST00000417496 CCDC178Q5BJE1 867 aa16.25■□□□□ 0.19
HDAC9-208ENST00000417496 TTI2Q6NXR4 508 aa16.25■□□□□ 0.19
HDAC9-208ENST00000417496 USP17L2Q6R6M4 530 aa16.25■□□□□ 0.19
HDAC9-208ENST00000417496 CSGALNACT2Q8N6G5 542 aa16.25■□□□□ 0.19
HDAC9-208ENST00000417496 DUSP9Q99956 384 aaKnown RBP16.25■□□□□ 0.19
HDAC9-208ENST00000417496 SH3GLB2Q9NR46 395 aa16.25■□□□□ 0.19
HDAC9-208ENST00000417496 DUSP10Q9Y6W6 482 aa16.25■□□□□ 0.19
HDAC9-208ENST00000417496 CCDC66A2RUB6 948 aa16.25■□□□□ 0.19
HDAC9-208ENST00000417496 RASSF10A6NK89 507 aa16.25■□□□□ 0.19
HDAC9-208ENST00000417496 ERCC3P19447 782 aa16.25■□□□□ 0.19
HDAC9-208ENST00000417496 HERVK_113P62684 666 aa16.25■□□□□ 0.19
HDAC9-208ENST00000417496 AMPD2Q01433 879 aa16.25■□□□□ 0.19
HDAC9-208ENST00000417496 ANKRD40Q6AI12 368 aa16.25■□□□□ 0.19
HDAC9-208ENST00000417496 TPTE2Q6XPS3 522 aa16.25■□□□□ 0.19
HDAC9-208ENST00000417496 GIMAP8Q8ND71 665 aaPredicted RBP16.25■□□□□ 0.19
HDAC9-208ENST00000417496 SCN7AQ01118 1682 aa16.25■□□□□ 0.19
HDAC9-208ENST00000417496 RCCD1A6NED2 376 aa16.24■□□□□ 0.19
HDAC9-208ENST00000417496 PSMA7O14818 248 aa16.24■□□□□ 0.19
HDAC9-208ENST00000417496 ZPR1O75312 459 aa16.24■□□□□ 0.19
HDAC9-208ENST00000417496 RHOBTB3O94955 611 aa16.24■□□□□ 0.19
HDAC9-208ENST00000417496 TECP42680 631 aa16.24■□□□□ 0.19
HDAC9-208ENST00000417496 TRIM14Q14142 442 aa16.24■□□□□ 0.19
HDAC9-208ENST00000417496 TUBGCP2Q9BSJ2 902 aa16.24■□□□□ 0.19
HDAC9-208ENST00000417496 ADAM21Q9UKJ8 722 aa16.24■□□□□ 0.19
HDAC9-208ENST00000417496 RAB21Q9UL25 225 aa16.24■□□□□ 0.19
HDAC9-208ENST00000417496 ATP1A1P05023 1023 aaKnown RBP16.24■□□□□ 0.19
HDAC9-208ENST00000417496 TRIM21P19474 475 aaKnown RBP16.24■□□□□ 0.19
HDAC9-208ENST00000417496 CYP27A1Q02318 531 aa16.24■□□□□ 0.19
HDAC9-208ENST00000417496 PDE4DQ08499 809 aa16.24■□□□□ 0.19
HDAC9-208ENST00000417496 CCDC122Q5T0U0 273 aa16.24■□□□□ 0.19
HDAC9-208ENST00000417496 MSANTD4Q8NCY6 345 aa16.24■□□□□ 0.19
HDAC9-208ENST00000417496 DNAJC7Q99615 494 aa16.24■□□□□ 0.19
HDAC9-208ENST00000417496 HINFPQ9BQA5 517 aa16.24■□□□□ 0.19
HDAC9-208ENST00000417496 LACRTQ9GZZ8 138 aa16.24■□□□□ 0.19
HDAC9-208ENST00000417496 NARFQ9UHQ1 456 aa16.24■□□□□ 0.19
HDAC9-208ENST00000417496 L1RE1Q9UN81 338 aa16.24■□□□□ 0.19
HDAC9-208ENST00000417496 RASA1P20936 1047 aa16.23■□□□□ 0.19
HDAC9-208ENST00000417496 NAPAP54920 295 aa16.23■□□□□ 0.19
HDAC9-208ENST00000417496 CABP7Q86V35 215 aa16.23■□□□□ 0.19
HDAC9-208ENST00000417496 CAPZA3Q96KX2 299 aa16.23■□□□□ 0.19
HDAC9-208ENST00000417496 NYXQ9GZU5 481 aa16.23■□□□□ 0.19
HDAC9-208ENST00000417496 MAGEC2Q9UBF1 373 aaPredicted RBP16.23■□□□□ 0.19
HDAC9-208ENST00000417496 CAPN11Q9UMQ6 739 aa16.23■□□□□ 0.19
HDAC9-208ENST00000417496 PALM3A6NDB9 673 aaPredicted RBP16.23■□□□□ 0.19
HDAC9-208ENST00000417496 PHACTR2O75167 634 aa16.23■□□□□ 0.19
HDAC9-208ENST00000417496 TBC1D8BQ0IIM8 1120 aa16.23■□□□□ 0.19
HDAC9-208ENST00000417496 KCNB1Q14721 858 aa16.23■□□□□ 0.19
HDAC9-208ENST00000417496 PCMTD1Q96MG8 357 aaPredicted RBP16.23■□□□□ 0.19
HDAC9-208ENST00000417496 CCSER1Q9C0I3 900 aa16.23■□□□□ 0.19
HDAC9-208ENST00000417496 UBA5Q9GZZ9 404 aa16.23■□□□□ 0.19
HDAC9-208ENST00000417496 FLT1P17948 1338 aa16.23■□□□□ 0.19
HDAC9-208ENST00000417496 IRS2Q9Y4H2 1338 aa16.23■□□□□ 0.19
HDAC9-208ENST00000417496 LAMB2P55268 1798 aa16.23■□□□□ 0.19
HDAC9-208ENST00000417496 SMCO2A6NFE2 343 aa16.22■□□□□ 0.19
HDAC9-208ENST00000417496 EEF1GP26641 437 aaKnown RBP16.22■□□□□ 0.19
HDAC9-208ENST00000417496 ASIC1P78348 528 aa16.22■□□□□ 0.19
HDAC9-208ENST00000417496 STIM1Q13586 685 aa16.22■□□□□ 0.19
HDAC9-208ENST00000417496 PDS5AQ29RF7 1337 aaKnown RBP16.22■□□□□ 0.19
HDAC9-208ENST00000417496 SPTY2D1Q68D10 685 aaPredicted RBP16.22■□□□□ 0.19
HDAC9-208ENST00000417496 HNRNPLLQ8WVV9 542 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms