RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 FBXO33Q7Z6M2 555 aa14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 OR8K1Q8NGG5 319 aa14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 NSUN4Q96CB9 384 aaKnown RBP14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 CHP1Q99653 195 aa14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 TRIM66O15016 1216 aa14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 RPN1P04843 607 aaKnown RBP14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 CTCFLQ8NI51 663 aaPredicted RBP14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 VIPAS39Q9H9C1 493 aa14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 TRIM10Q9UDY6 481 aa14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 PSMD14O00487 310 aa14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 PES1O00541 588 aaKnown RBP14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 HIBADHP31937 336 aaKnown RBP14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 TRAPPC10P48553 1259 aa14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 TPTE2Q6XPS3 522 aa14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 RNF216Q9NWF9 866 aaPredicted RBP14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 MKRN1Q9UHC7 482 aaKnown RBP14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 LUC7L2Q9Y383 392 aaKnown RBP14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 RTCBQ9Y3I0 505 aaKnown RBP14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 SCN7AQ01118 1682 aa14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 H7C1D1 291 aa14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 MCM7P33993 719 aa14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 USP14P54578 494 aa14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 PIK3AP1Q6ZUJ8 805 aa14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 TMTC3Q6ZXV5 915 aa14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 EHBP1Q8NDI1 1231 aa14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 SECISBP2LQ93073 1101 aaKnown RBP14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 NYXQ9GZU5 481 aa14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 FAM204AQ9H8W3 233 aa14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 USP21Q9UK80 565 aa14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 MAPK8IP1Q9UQF2 711 aa14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 REXO2Q9Y3B8 237 aaKnown RBP14.38□□□□□ -0.11
LRRTM1-205ENST00000417012 TTC26A0AVF1 554 aa14.37□□□□□ -0.11
LRRTM1-205ENST00000417012 DDAH1O94760 285 aa14.37□□□□□ -0.11
LRRTM1-205ENST00000417012 CYP2D6P10635 497 aa14.37□□□□□ -0.11
LRRTM1-205ENST00000417012 NPY5RQ15761 445 aa14.37□□□□□ -0.11
LRRTM1-205ENST00000417012 MTRQ99707 1265 aa14.37□□□□□ -0.11
LRRTM1-205ENST00000417012 GDAQ9Y2T3 454 aa14.37□□□□□ -0.11
LRRTM1-205ENST00000417012 SAR1BQ9Y6B6 198 aa14.37□□□□□ -0.11
LRRTM1-205ENST00000417012 ENC1O14682 589 aa14.37□□□□□ -0.11
LRRTM1-205ENST00000417012 PARP1P09874 1014 aaKnown RBP14.37□□□□□ -0.11
LRRTM1-205ENST00000417012 TM4SF1P30408 202 aa14.37□□□□□ -0.11
LRRTM1-205ENST00000417012 PRCPP42785 496 aa14.37□□□□□ -0.11
LRRTM1-205ENST00000417012 NLRP5P59047 1200 aa14.37□□□□□ -0.11
LRRTM1-205ENST00000417012 CKAP4Q07065 602 aaKnown RBP14.37□□□□□ -0.11
LRRTM1-205ENST00000417012 TROAPQ12815 778 aa14.37□□□□□ -0.11
LRRTM1-205ENST00000417012 FAM47AQ5JRC9 791 aa14.37□□□□□ -0.11
LRRTM1-205ENST00000417012 CCDC122Q5T0U0 273 aa14.37□□□□□ -0.11
LRRTM1-205ENST00000417012 CNTNAP5Q8WYK1 1306 aa14.37□□□□□ -0.11
LRRTM1-205ENST00000417012 DUOX1Q9NRD9 1551 aa14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 LGALS16A8MUM7 142 aa14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 RNF40O75150 1001 aa14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 KIAA1328Q86T90 577 aa14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 MB21D1Q8N884 522 aa14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 RPGRIP1Q96KN7 1286 aa14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 GPR101Q96P66 508 aaPredicted RBP14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 RSPH14Q9UHP6 348 aa14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 STAT6P42226 847 aa14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 KRT83P78385 493 aa14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 DNAJC7Q99615 494 aa14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 A0A1W2PQC6 194 aa14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 IPO7O95373 1038 aaKnown RBP14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 ATP1A1P05023 1023 aaKnown RBP14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 AARSP49588 968 aaKnown RBP eCLIP14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 RC3H1Q5TC82 1133 aaKnown RBP14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 AFAP1L1Q8TED9 768 aa14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 BRIP1Q9BX63 1249 aa14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 MAGEC2Q9UBF1 373 aaPredicted RBP14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 HDAC6Q9UBN7 1215 aa14.36□□□□□ -0.11
LRRTM1-205ENST00000417012 ZNF831Q5JPB2 1677 aa14.35□□□□□ -0.11
LRRTM1-205ENST00000417012 KRT86O43790 486 aa14.35□□□□□ -0.11
LRRTM1-205ENST00000417012 EEF1GP26641 437 aaKnown RBP14.35□□□□□ -0.11
LRRTM1-205ENST00000417012 LONP1P36776 959 aaKnown RBP14.35□□□□□ -0.11
LRRTM1-205ENST00000417012 STIM1Q13586 685 aa14.35□□□□□ -0.11
LRRTM1-205ENST00000417012 DCP1AQ9NPI6 582 aaPredicted RBP14.35□□□□□ -0.11
LRRTM1-205ENST00000417012 ANKIB1Q9P2G1 1089 aa14.35□□□□□ -0.11
LRRTM1-205ENST00000417012 TARSL2A2RTX5 802 aaKnown RBP14.35□□□□□ -0.11
LRRTM1-205ENST00000417012 TRIM49BA6NDI0 452 aa14.35□□□□□ -0.11
LRRTM1-205ENST00000417012 PCP11498 1178 aaKnown RBP14.35□□□□□ -0.11
LRRTM1-205ENST00000417012 SCG2P13521 617 aa14.35□□□□□ -0.11
LRRTM1-205ENST00000417012 ARL6IP4Q66PJ3 421 aaKnown RBP14.35□□□□□ -0.11
LRRTM1-205ENST00000417012 RASSF8Q8NHQ8 419 aa14.35□□□□□ -0.11
LRRTM1-205ENST00000417012 CAGE1Q8TC20 777 aa14.35□□□□□ -0.11
LRRTM1-205ENST00000417012 MMS19Q96T76 1030 aa14.35□□□□□ -0.11
LRRTM1-205ENST00000417012 CAPN11Q9UMQ6 739 aa14.35□□□□□ -0.11
LRRTM1-205ENST00000417012 RFC4P35249 363 aa14.34□□□□□ -0.11
LRRTM1-205ENST00000417012 CYLC1P35663 651 aaPredicted RBP14.34□□□□□ -0.11
LRRTM1-205ENST00000417012 HERVK_113P62684 666 aa14.34□□□□□ -0.11
LRRTM1-205ENST00000417012 NFIXQ14938 502 aa14.34□□□□□ -0.11
LRRTM1-205ENST00000417012 IL17AQ16552 155 aa14.34□□□□□ -0.11
LRRTM1-205ENST00000417012 PAPD7Q5XG87 772 aaKnown RBP14.34□□□□□ -0.11
LRRTM1-205ENST00000417012 ADSSL1Q8N142 457 aa14.34□□□□□ -0.11
LRRTM1-205ENST00000417012 JAKMIP2Q96AA8 810 aa14.34□□□□□ -0.11
LRRTM1-205ENST00000417012 CAPZA3Q96KX2 299 aa14.34□□□□□ -0.11
LRRTM1-205ENST00000417012 TRIM47Q96LD4 638 aa14.34□□□□□ -0.11
LRRTM1-205ENST00000417012 PDS5AQ29RF7 1337 aaKnown RBP14.34□□□□□ -0.11
LRRTM1-205ENST00000417012 FOXR1Q6PIV2 292 aa14.34□□□□□ -0.11
LRRTM1-205ENST00000417012 IRF2BP1Q8IU81 584 aa14.34□□□□□ -0.11
LRRTM1-205ENST00000417012 FNBP4Q8N3X1 1017 aaPredicted RBP14.34□□□□□ -0.11
LRRTM1-205ENST00000417012 SRBD1Q8N5C6 995 aaKnown RBP14.34□□□□□ -0.11
LRRTM1-205ENST00000417012 ZNHIT6Q9NWK9 470 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms