RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 TRAPPC10P48553 1259 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 ATP2C1P98194 919 aaPredicted RBP12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 STX1AQ16623 288 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 LETM2Q2VYF4 491 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 FKBP1CQ5VVH2 108 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 GALNT17Q6IS24 598 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 FAM83AQ86UY5 434 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 REXO1Q8N1G1 1221 aaKnown RBP12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 SYMPKQ92797 1274 aaKnown RBP12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 SERTAD1Q9UHV2 236 aa12.17□□□□□ -0.46
SMPD4P1-201ENST00000416717 TMEM232C9JQI7 657 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 TAL1P17542 331 aaPredicted RBP12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 TNNI2P48788 182 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 ADCY7P51828 1080 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 ZNF280AP59817 542 aaPredicted RBP12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 ZRSR1Q15695 479 aaKnown RBP12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 IL17AQ16552 155 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 UBE2SQ16763 222 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 QRICH1Q2TAL8 776 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 KIAA1755Q5JYT7 1200 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 KRBA2Q6ZNG9 492 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 GRAMD1CQ8IYS0 662 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 TRIM44Q96DX7 344 aaPredicted RBP12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 PPP1R9BQ96SB3 815 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 HACL1Q9UJ83 578 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 MYH7BA7E2Y1 1941 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 A0A087X0B3 334 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 ZBTB5O15062 677 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 AP5Z1O43299 807 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 CCNT1O60563 726 aaKnown RBP12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 BMP15O95972 392 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 RPS12P25398 132 aaKnown RBP12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 CDC25AP30304 524 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 NONOQ15233 471 aaKnown RBP eCLIP12.16□□□□□ -0.469e-7■■■□□ 16.3
SMPD4P1-201ENST00000416717 UVSSAQ2YD98 709 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 PRAMEF18Q5VWM3 479 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 ZNF579Q8NAF0 562 aaKnown RBP12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 TBCKQ8TEA7 893 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 FERMT2Q96AC1 680 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 DHX58Q96C10 678 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 GLIS2Q9BZE0 524 aaPredicted RBP12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 TMEM60Q9H2L4 133 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 ARHGEF10LQ9HCE6 1279 aa12.16□□□□□ -0.46
SMPD4P1-201ENST00000416717 SBF1O95248 1867 aa12.15□□□□□ -0.46
SMPD4P1-201ENST00000416717 FAM237AA0A1B0GTK4 181 aa12.15□□□□□ -0.46
SMPD4P1-201ENST00000416717 BMP3P12645 472 aa12.15□□□□□ -0.46
SMPD4P1-201ENST00000416717 CDC37Q16543 378 aaPredicted RBP12.15□□□□□ -0.46
SMPD4P1-201ENST00000416717 KIF4BQ2VIQ3 1234 aa12.15□□□□□ -0.46
SMPD4P1-201ENST00000416717 USH1GQ495M9 461 aa12.15□□□□□ -0.46
SMPD4P1-201ENST00000416717 GMCL1P1Q8NEA9 526 aa12.15□□□□□ -0.46
SMPD4P1-201ENST00000416717 TIGD1Q96MW7 591 aa12.15□□□□□ -0.46
SMPD4P1-201ENST00000416717 PGAP2Q9UHJ9 254 aa12.15□□□□□ -0.46
SMPD4P1-201ENST00000416717 ADCY5O95622 1261 aa12.14□□□□□ -0.47
SMPD4P1-201ENST00000416717 CAP2P40123 477 aa12.14□□□□□ -0.47
SMPD4P1-201ENST00000416717 DPCR1Q3MIW9 517 aa12.14□□□□□ -0.47
SMPD4P1-201ENST00000416717 KRT25Q7Z3Z0 450 aa12.14□□□□□ -0.47
SMPD4P1-201ENST00000416717 ANO10Q9NW15 660 aa12.14□□□□□ -0.47
SMPD4P1-201ENST00000416717 PCDHA1Q9Y5I3 950 aa12.14□□□□□ -0.47
SMPD4P1-201ENST00000416717 DICER1Q9UPY3 1922 aaKnown RBP12.14□□□□□ -0.47
SMPD4P1-201ENST00000416717 PRR29P0C7W0 189 aa12.14□□□□□ -0.47
SMPD4P1-201ENST00000416717 FAM83BQ5T0W9 1011 aa12.14□□□□□ -0.47
SMPD4P1-201ENST00000416717 C4orf32Q8N8J7 132 aa12.14□□□□□ -0.47
SMPD4P1-201ENST00000416717 DPF2Q92785 391 aa12.14□□□□□ -0.47
SMPD4P1-201ENST00000416717 FZD1Q9UP38 647 aa12.14□□□□□ -0.47
SMPD4P1-201ENST00000416717 ESYT2A0FGR8 921 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 hCG_1984214I3L0E3 225 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 AFMP43652 599 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 TNFAIP1Q13829 316 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 SYDE2Q5VT97 1194 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 NEK8Q86SG6 692 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 ZNF713Q8N859 430 aaPredicted RBP12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 TRPM4Q8TD43 1214 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 MTMR8Q96EF0 704 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 GMCL1Q96IK5 515 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 PDLIM2Q96JY6 352 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 TEPSINQ96N21 525 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 DEFB129Q9H1M3 183 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 PP2D1A8MPX8 630 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 USP17L15C9J2P7 530 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 USP17L13C9JLJ4 530 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 USP17L11C9JVI0 530 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 USP17L18D6R9N7 530 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 USP17L22D6RA61 530 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 USP17L17D6RBQ6 530 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 USP17L19D6RCP7 530 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 USP17L20D6RJB6 530 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 H7C1D1 291 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 TBC1D12O60347 775 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 CASP1P29466 404 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 USP17L24Q0WX57 530 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 NBPF12Q5TAG4 269 aaPredicted RBP12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 ANGEL2Q5VTE6 544 aaKnown RBP12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 USP17L6PQ6QN14 398 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 STAMQ92783 540 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 CUL5Q93034 780 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 PSTPIP2Q9H939 334 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 RIC8AQ9NPQ8 531 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 TMX2Q9Y320 296 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 PCDHA5Q9Y5H7 936 aa12.13□□□□□ -0.47
SMPD4P1-201ENST00000416717 ACTN4O43707 911 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 378.6 ms