RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 FAM193BQ96PV7 902 aaPredicted RBP11.72□□□□□ -0.53
COL12A1-203ENST00000416123 PALM3A6NDB9 673 aaPredicted RBP11.72□□□□□ -0.53
COL12A1-203ENST00000416123 PDIA3P30101 505 aaKnown RBP11.72□□□□□ -0.53
COL12A1-203ENST00000416123 FAM76AQ8TAV0 307 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 WDR17Q8IZU2 1322 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 KAZNQ674X7 775 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 ZBTB8OSQ8IWT0 167 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 MICALL1Q8N3F8 863 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 IFIH1Q9BYX4 1025 aaKnown RBP11.72□□□□□ -0.53
COL12A1-203ENST00000416123 CLASP1Q7Z460 1538 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 CLTCL1P53675 1640 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 LRCH2Q5VUJ6 765 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 NSMCE1Q8WV22 266 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 ZNF577Q9BSK1 485 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 CAPN9O14815 690 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 USP17L2Q6R6M4 530 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 LCORLQ8N3X6 602 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 CCDC110Q8TBZ0 833 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 COA7Q96BR5 231 aa11.71□□□□□ -0.53
COL12A1-203ENST00000416123 RPN1P04843 607 aaKnown RBP11.71□□□□□ -0.53
COL12A1-203ENST00000416123 ITKQ08881 620 aa11.71□□□□□ -0.53
COL12A1-203ENST00000416123 TAB3Q8N5C8 712 aaPredicted RBP11.71□□□□□ -0.53
COL12A1-203ENST00000416123 CD2APQ9Y5K6 639 aa11.71□□□□□ -0.53
COL12A1-203ENST00000416123 ATP10DQ9P241 1426 aa11.71□□□□□ -0.53
COL12A1-203ENST00000416123 MEIS1O00470 390 aa11.71□□□□□ -0.53
COL12A1-203ENST00000416123 ACTN4O43707 911 aaKnown RBP11.71□□□□□ -0.53
COL12A1-203ENST00000416123 HLFQ16534 295 aa11.71□□□□□ -0.53
COL12A1-203ENST00000416123 ADALQ6DHV7 355 aa11.71□□□□□ -0.53
COL12A1-203ENST00000416123 ARMCX5Q6P1M9 558 aa11.71□□□□□ -0.53
COL12A1-203ENST00000416123 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.71□□□□□ -0.53
COL12A1-203ENST00000416123 NKIRAS1Q9NYS0 192 aa11.71□□□□□ -0.53
COL12A1-203ENST00000416123 SAMD15Q9P1V8 674 aa11.71□□□□□ -0.53
COL12A1-203ENST00000416123 CROCC2H7BZ55 1655 aa11.71□□□□□ -0.53
COL12A1-203ENST00000416123 C21orf2O43822 256 aa11.71□□□□□ -0.53
COL12A1-203ENST00000416123 PABPC4Q13310 644 aaKnown RBP eCLIP11.71□□□□□ -0.53
COL12A1-203ENST00000416123 ABT1Q9ULW3 272 aaKnown RBP11.71□□□□□ -0.53
COL12A1-203ENST00000416123 U2AF2P26368 475 aaKnown RBP eCLIP11.71□□□□□ -0.54
COL12A1-203ENST00000416123 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.54
COL12A1-203ENST00000416123 PUS7LQ9H0K6 701 aaKnown RBP11.71□□□□□ -0.54
COL12A1-203ENST00000416123 PFKFB2O60825 505 aa11.71□□□□□ -0.54
COL12A1-203ENST00000416123 DDAH1O94760 285 aa11.71□□□□□ -0.54
COL12A1-203ENST00000416123 TNNC2P02585 160 aa11.71□□□□□ -0.54
COL12A1-203ENST00000416123 CLCN1P35523 988 aa11.71□□□□□ -0.54
COL12A1-203ENST00000416123 TPD52P55327 224 aaPredicted RBP11.71□□□□□ -0.54
COL12A1-203ENST00000416123 BIRC2Q13490 618 aa11.71□□□□□ -0.54
COL12A1-203ENST00000416123 DIXDC1Q155Q3 683 aa11.71□□□□□ -0.54
COL12A1-203ENST00000416123 PTPN21Q16825 1174 aa11.71□□□□□ -0.54
COL12A1-203ENST00000416123 GDAP1L1Q96MZ0 367 aa11.71□□□□□ -0.54
COL12A1-203ENST00000416123 GLI2P10070 1586 aa11.71□□□□□ -0.54
COL12A1-203ENST00000416123 MAN1A1P33908 653 aa11.71□□□□□ -0.54
COL12A1-203ENST00000416123 DESI2Q9BSY9 194 aa11.71□□□□□ -0.54
COL12A1-203ENST00000416123 TMEM63CQ9P1W3 806 aa11.71□□□□□ -0.54
COL12A1-203ENST00000416123 USP17L3A6NCW0 530 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 USP17L4A6NCW7 530 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 MARK3P27448 753 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 STAT2P52630 851 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 USP17L1Q7RTZ2 530 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 MGARPQ8TDB4 240 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 KIAA1468Q9P260 1216 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 ERCC6L2Q5T890 1561 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 SUSD4Q5VX71 490 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 HINFPQ9BQA5 517 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 MECOMQ03112 1051 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 SLFNL1Q499Z3 407 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 DISC1Q9NRI5 854 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 RABGAP1Q9Y3P9 1069 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 HEG1Q9ULI3 1381 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 ANKARQ7Z5J8 1434 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 RIOK3O14730 519 aaKnown RBP11.7□□□□□ -0.54
COL12A1-203ENST00000416123 GNA14O95837 355 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 RPS6KA1Q15418 735 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 PPM1KQ8N3J5 372 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 RSAD2Q8WXG1 361 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 GJA10Q969M2 543 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 ADPGKQ9BRR6 497 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 CIAO1O76071 339 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 ADD2P35612 726 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 NBPF11Q86T75 865 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 IFT20Q8IY31 132 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 SMYD4Q8IYR2 804 aaPredicted RBP11.7□□□□□ -0.54
COL12A1-203ENST00000416123 VPS52Q8N1B4 723 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 TIGD1Q96MW7 591 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 LSG1Q9H089 658 aaKnown RBP11.7□□□□□ -0.54
COL12A1-203ENST00000416123 CACNB3P54284 484 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 CLUL1Q15846 466 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 LONRF2Q1L5Z9 754 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 C4orf50Q6ZRC1 276 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 NBPF3Q9H094 633 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 ATF7P17544 494 aaPredicted RBP11.7□□□□□ -0.54
COL12A1-203ENST00000416123 STAT1P42224 750 aa11.7□□□□□ -0.54
COL12A1-203ENST00000416123 POLR2FP61218 127 aaKnown RBP11.7□□□□□ -0.54
COL12A1-203ENST00000416123 DALRD3Q5D0E6 543 aaKnown RBP11.7□□□□□ -0.54
COL12A1-203ENST00000416123 SOS2Q07890 1332 aaPredicted RBP11.69□□□□□ -0.54
COL12A1-203ENST00000416123 OSBPP22059 807 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 VPS41P49754 854 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 IMPACTQ9P2X3 320 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 SWAP70Q9UH65 585 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 TM6SF1Q9BZW5 370 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 STAM2O75886 525 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 ELF2Q15723 593 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms