RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 ACSS3Q9H6R3 686 aa4.42□□□□□ -1.7
APP-207ENST00000415997 C1GALT1Q9NS00 363 aa4.42□□□□□ -1.7
APP-207ENST00000415997 STXBP5LQ9Y2K9 1186 aa4.42□□□□□ -1.7
APP-207ENST00000415997 LAMB4A4D0S4 1761 aa4.42□□□□□ -1.7
APP-207ENST00000415997 RNF123Q5XPI4 1314 aa4.42□□□□□ -1.7
APP-207ENST00000415997 A0A1W2PP55 124 aa4.41□□□□□ -1.7
APP-207ENST00000415997 FZD9O00144 591 aa4.41□□□□□ -1.7
APP-207ENST00000415997 CYP27B1O15528 508 aa4.41□□□□□ -1.7
APP-207ENST00000415997 EIF4EBP3O60516 100 aaPredicted RBP4.41□□□□□ -1.7
APP-207ENST00000415997 FAM13AO94988 1023 aa4.41□□□□□ -1.7
APP-207ENST00000415997 RFC4P35249 363 aa4.41□□□□□ -1.7
APP-207ENST00000415997 CD96P40200 585 aa4.41□□□□□ -1.7
APP-207ENST00000415997 CDK5R2Q13319 367 aa4.41□□□□□ -1.7
APP-207ENST00000415997 PKN1Q16512 942 aa4.41□□□□□ -1.7
APP-207ENST00000415997 CYP27C1Q4G0S4 372 aa4.41□□□□□ -1.7
APP-207ENST00000415997 HP1BP3Q5SSJ5 553 aaPredicted RBP4.41□□□□□ -1.7
APP-207ENST00000415997 OGFOD3Q6PK18 319 aa4.41□□□□□ -1.7
APP-207ENST00000415997 PLD6Q8N2A8 252 aaKnown RBP4.41□□□□□ -1.7
APP-207ENST00000415997 IP6K1Q92551 441 aa4.41□□□□□ -1.7
APP-207ENST00000415997 FAM122AQ96E09 287 aa4.41□□□□□ -1.7
APP-207ENST00000415997 NRSN2Q9GZP1 204 aa4.41□□□□□ -1.7
APP-207ENST00000415997 RC3H2Q9HBD1 1191 aaKnown RBP4.41□□□□□ -1.7
APP-207ENST00000415997 ZFYVE1Q9HBF4 777 aa4.41□□□□□ -1.7
APP-207ENST00000415997 PCDH11XQ9BZA7 1347 aa4.41□□□□□ -1.7
APP-207ENST00000415997 PCDH11YQ9BZA8 1340 aa4.41□□□□□ -1.7
APP-207ENST00000415997 PKD1L2Q7Z442 2459 aa4.4□□□□□ -1.7
APP-207ENST00000415997 CARMIL3Q8ND23 1372 aa4.4□□□□□ -1.7
APP-207ENST00000415997 PAPPA2Q9BXP8 1791 aa4.4□□□□□ -1.7
APP-207ENST00000415997 A0A1W2PPC1 479 aa4.4□□□□□ -1.71
APP-207ENST00000415997 FZD6O60353 706 aa4.4□□□□□ -1.71
APP-207ENST00000415997 FAM87AP0C7U9 286 aa4.4□□□□□ -1.71
APP-207ENST00000415997 CD8BP10966 210 aa4.4□□□□□ -1.71
APP-207ENST00000415997 LIG1P18858 919 aa4.4□□□□□ -1.71
APP-207ENST00000415997 ZNF157P51786 506 aaPredicted RBP4.4□□□□□ -1.71
APP-207ENST00000415997 INTS3Q68E01 1043 aaKnown RBP4.4□□□□□ -1.71
APP-207ENST00000415997 CCNJLQ8IV13 435 aa4.4□□□□□ -1.71
APP-207ENST00000415997 KSR1Q8IVT5 923 aa4.4□□□□□ -1.71
APP-207ENST00000415997 GPC2Q8N158 579 aa4.4□□□□□ -1.71
APP-207ENST00000415997 STK11IPQ8N1F8 1099 aa4.4□□□□□ -1.71
APP-207ENST00000415997 PI4K2BQ8TCG2 481 aa4.4□□□□□ -1.71
APP-207ENST00000415997 FAM168AQ92567 244 aa4.4□□□□□ -1.71
APP-207ENST00000415997 PIDD1Q9HB75 910 aa4.4□□□□□ -1.71
APP-207ENST00000415997 SRP68Q9UHB9 627 aaKnown RBP4.4□□□□□ -1.71
APP-207ENST00000415997 PGAP2Q9UHJ9 254 aa4.4□□□□□ -1.71
APP-207ENST00000415997 ASAP1Q9ULH1 1129 aa4.4□□□□□ -1.71
APP-207ENST00000415997 PPP1R9AQ9ULJ8 1098 aa4.4□□□□□ -1.71
APP-207ENST00000415997 MYH14Q7Z406 1995 aaKnown RBP4.4□□□□□ -1.71
APP-207ENST00000415997 BCORQ6W2J9 1755 aa4.4□□□□□ -1.71
APP-207ENST00000415997 AFDNP55196 1824 aaKnown RBP4.39□□□□□ -1.71
APP-207ENST00000415997 COL11A2P13942 1736 aaPredicted RBP4.39□□□□□ -1.71
APP-207ENST00000415997 RNGTTO60942 597 aaKnown RBP4.39□□□□□ -1.71
APP-207ENST00000415997 FARP2O94887 1054 aaPredicted RBP4.39□□□□□ -1.71
APP-207ENST00000415997 CELF2O95319 508 aaKnown RBP4.39□□□□□ -1.71
APP-207ENST00000415997 EN2P19622 333 aaPredicted RBP4.39□□□□□ -1.71
APP-207ENST00000415997 KIF23Q02241 960 aaPredicted RBP4.39□□□□□ -1.71
APP-207ENST00000415997 ZNF211Q13398 564 aaPredicted RBP4.39□□□□□ -1.71
APP-207ENST00000415997 USPL1Q5W0Q7 1092 aa4.39□□□□□ -1.71
APP-207ENST00000415997 C2CD5Q86YS7 1000 aa4.39□□□□□ -1.71
APP-207ENST00000415997 ZNF296Q8WUU4 475 aaPredicted RBP4.39□□□□□ -1.71
APP-207ENST00000415997 CSRNP1Q96S65 589 aa4.39□□□□□ -1.71
APP-207ENST00000415997 TCF12Q99081 682 aa4.39□□□□□ -1.71
APP-207ENST00000415997 TRIM56Q9BRZ2 755 aaKnown RBP4.39□□□□□ -1.71
APP-207ENST00000415997 EHD4Q9H223 541 aa4.39□□□□□ -1.71
APP-207ENST00000415997 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.39□□□□□ -1.71
APP-207ENST00000415997 SNED1Q8TER0 1413 aa4.38□□□□□ -1.71
APP-207ENST00000415997 DBX1A6NMT0 343 aa4.38□□□□□ -1.71
APP-207ENST00000415997 H0YIN7 160 aa4.38□□□□□ -1.71
APP-207ENST00000415997 RNASE1P07998 156 aaKnown RBP4.38□□□□□ -1.71
APP-207ENST00000415997 EPS15P42566 896 aa4.38□□□□□ -1.71
APP-207ENST00000415997 FKBP4Q02790 459 aaKnown RBP eCLIP4.38□□□□□ -1.71
APP-207ENST00000415997 NBPF6Q5VWK0 638 aa4.38□□□□□ -1.71
APP-207ENST00000415997 SEZ6L2Q6UXD5 910 aa4.38□□□□□ -1.71
APP-207ENST00000415997 USP50Q70EL3 339 aaPredicted RBP4.38□□□□□ -1.71
APP-207ENST00000415997 GALNT12Q8IXK2 581 aa4.38□□□□□ -1.71
APP-207ENST00000415997 NETO1Q8TDF5 533 aa4.38□□□□□ -1.71
APP-207ENST00000415997 ARMC5Q96C12 935 aa4.38□□□□□ -1.71
APP-207ENST00000415997 WDR89Q96FK6 387 aaPredicted RBP4.38□□□□□ -1.71
APP-207ENST00000415997 NBPF4Q96M43 638 aa4.38□□□□□ -1.71
APP-207ENST00000415997 WDR18Q9BV38 432 aa4.38□□□□□ -1.71
APP-207ENST00000415997 SSU72Q9NP77 194 aaKnown RBP4.38□□□□□ -1.71
APP-207ENST00000415997 MTMR10Q9NXD2 777 aa4.38□□□□□ -1.71
APP-207ENST00000415997 SERPINA10Q9UK55 444 aa4.38□□□□□ -1.71
APP-207ENST00000415997 MTMR7Q9Y216 660 aa4.38□□□□□ -1.71
APP-207ENST00000415997 ANKRD31Q8N7Z5 1873 aa4.38□□□□□ -1.71
APP-207ENST00000415997 COL4A5P29400 1685 aa4.38□□□□□ -1.71
APP-207ENST00000415997 SBNO2Q9Y2G9 1366 aa4.38□□□□□ -1.71
APP-207ENST00000415997 MON2Q7Z3U7 1717 aa4.38□□□□□ -1.71
APP-207ENST00000415997 CDH23Q9H251 3354 aa4.37□□□□□ -1.71
APP-207ENST00000415997 RGPD2P0DJD1 1756 aa4.37□□□□□ -1.71
APP-207ENST00000415997 ARFGEF2Q9Y6D5 1785 aa4.37□□□□□ -1.71
APP-207ENST00000415997 CARNS1A5YM72 827 aa4.37□□□□□ -1.71
APP-207ENST00000415997 SLFN14P0C7P3 912 aa4.37□□□□□ -1.71
APP-207ENST00000415997 FUT4P22083 530 aa4.37□□□□□ -1.71
APP-207ENST00000415997 NFIXQ14938 502 aa4.37□□□□□ -1.71
APP-207ENST00000415997 AOC3Q16853 763 aa4.37□□□□□ -1.71
APP-207ENST00000415997 SOGA3Q5TF21 947 aa4.37□□□□□ -1.71
APP-207ENST00000415997 RGMBQ6NW40 437 aa4.37□□□□□ -1.71
APP-207ENST00000415997 ATG4DQ86TL0 474 aaPredicted RBP4.37□□□□□ -1.71
APP-207ENST00000415997 GJD3Q8N144 294 aa4.37□□□□□ -1.71
APP-207ENST00000415997 SYNE4Q8N205 404 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms