RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 HDAC8Q9BY41 377 aa4.34□□□□□ -1.71
LINC00428-201ENST00000415620 SRRDQ9UH36 339 aa4.34□□□□□ -1.71
LINC00428-201ENST00000415620 TLR6Q9Y2C9 796 aa4.34□□□□□ -1.71
LINC00428-201ENST00000415620 UHRF1BP1Q6BDS2 1440 aa4.34□□□□□ -1.71
LINC00428-201ENST00000415620 LRP5O75197 1615 aa4.34□□□□□ -1.71
LINC00428-201ENST00000415620 RAPGEF6Q8TEU7 1601 aa4.34□□□□□ -1.71
LINC00428-201ENST00000415620 SUPT6HQ7KZ85 1726 aaKnown RBP4.33□□□□□ -1.72
LINC00428-201ENST00000415620 ABCA10Q8WWZ4 1543 aa4.33□□□□□ -1.72
LINC00428-201ENST00000415620 CCDC88BA6NC98 1476 aa4.33□□□□□ -1.72
LINC00428-201ENST00000415620 NCOA1Q15788 1441 aa4.33□□□□□ -1.72
LINC00428-201ENST00000415620 CD109Q6YHK3 1445 aa4.33□□□□□ -1.72
LINC00428-201ENST00000415620 TTBK1Q5TCY1 1321 aaPredicted RBP4.33□□□□□ -1.72
LINC00428-201ENST00000415620 BUB1BO60566 1050 aaPredicted RBP4.33□□□□□ -1.72
LINC00428-201ENST00000415620 PRPF40AO75400 957 aaKnown RBP4.33□□□□□ -1.72
LINC00428-201ENST00000415620 ARL4AP40617 200 aa4.33□□□□□ -1.72
LINC00428-201ENST00000415620 MAGEA10P43363 369 aaPredicted RBP4.33□□□□□ -1.72
LINC00428-201ENST00000415620 TMC6Q7Z403 805 aa4.33□□□□□ -1.72
LINC00428-201ENST00000415620 PHC3Q8NDX5 983 aa4.33□□□□□ -1.72
LINC00428-201ENST00000415620 NOC4LQ9BVI4 516 aaKnown RBP4.33□□□□□ -1.72
LINC00428-201ENST00000415620 USP40Q9NVE5 1235 aa4.33□□□□□ -1.72
LINC00428-201ENST00000415620 C3P01024 1663 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 KDM5BQ9UGL1 1544 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 FHAD1B1AJZ9 1412 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 TMEM82A0PJX8 343 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 CHURC1-FNTBB4DL54 471 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 DNAJA2O60884 412 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 TNFRSF1AP19438 455 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 ST13P50502 369 aaKnown RBP4.32□□□□□ -1.72
LINC00428-201ENST00000415620 SLURP1P55000 103 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 RTP1P59025 263 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 CHMP4BP1P59074 171 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 LAPTM5Q13571 262 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 MEI1Q5TIA1 1274 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 DAGLBQ8NCG7 672 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 JARID2Q92833 1246 aaPredicted RBP4.32□□□□□ -1.72
LINC00428-201ENST00000415620 HHIPL1Q96JK4 782 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 CCDC74BQ96LY2 380 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 RNF19AQ9NV58 838 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 KLHL14Q9P2G3 628 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 PCDHA5Q9Y5H7 936 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 RICTORQ6R327 1708 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 CAMSAP1Q5T5Y3 1602 aa4.32□□□□□ -1.72
LINC00428-201ENST00000415620 WDR7Q9Y4E6 1490 aa4.31□□□□□ -1.72
LINC00428-201ENST00000415620 FFAR3O14843 346 aa4.31□□□□□ -1.72
LINC00428-201ENST00000415620 GRIN3BO60391 1043 aa4.31□□□□□ -1.72
LINC00428-201ENST00000415620 CEBPAP49715 358 aaPredicted RBP4.31□□□□□ -1.72
LINC00428-201ENST00000415620 PCBP3P57721 371 aaKnown RBP4.31□□□□□ -1.72
LINC00428-201ENST00000415620 KRTAP1-1Q07627 177 aa4.31□□□□□ -1.72
LINC00428-201ENST00000415620 NMIQ13287 307 aaPredicted RBP4.31□□□□□ -1.72
LINC00428-201ENST00000415620 RAB3GAP1Q15042 981 aa4.31□□□□□ -1.72
LINC00428-201ENST00000415620 GALNT18Q6P9A2 607 aa4.31□□□□□ -1.72
LINC00428-201ENST00000415620 BNC2Q6ZN30 1099 aaPredicted RBP4.31□□□□□ -1.72
LINC00428-201ENST00000415620 LINC00116Q8NCU8 138 aa4.31□□□□□ -1.72
LINC00428-201ENST00000415620 GATAD2BQ8WXI9 593 aa4.31□□□□□ -1.72
LINC00428-201ENST00000415620 PLCD4Q9BRC7 762 aa4.31□□□□□ -1.72
LINC00428-201ENST00000415620 FOXP3Q9BZS1 431 aa4.31□□□□□ -1.72
LINC00428-201ENST00000415620 REV1Q9UBZ9 1251 aa4.31□□□□□ -1.72
LINC00428-201ENST00000415620 POLR3KQ9Y2Y1 108 aaPredicted RBP4.31□□□□□ -1.72
LINC00428-201ENST00000415620 SETD1BQ9UPS6 1966 aaKnown RBP4.31□□□□□ -1.72
LINC00428-201ENST00000415620 UHRF1BP1LA0JNW5 1464 aa4.3□□□□□ -1.72
LINC00428-201ENST00000415620 FANCAO15360 1455 aa4.3□□□□□ -1.72
LINC00428-201ENST00000415620 CEP350Q5VT06 3117 aa4.3□□□□□ -1.72
LINC00428-201ENST00000415620 PTPRGP23470 1445 aa4.3□□□□□ -1.72
LINC00428-201ENST00000415620 WTIPA6NIX2 430 aaPredicted RBP4.3□□□□□ -1.72
LINC00428-201ENST00000415620 OVOL3O00110 214 aa4.3□□□□□ -1.72
LINC00428-201ENST00000415620 RAPGEF3O95398 923 aa4.3□□□□□ -1.72
LINC00428-201ENST00000415620 FSHBP01225 129 aa4.3□□□□□ -1.72
LINC00428-201ENST00000415620 PFKLP17858 780 aa4.3□□□□□ -1.72
LINC00428-201ENST00000415620 ADAM17P78536 824 aa4.3□□□□□ -1.72
LINC00428-201ENST00000415620 LMNB2Q03252 620 aa4.3□□□□□ -1.72
LINC00428-201ENST00000415620 BBS9Q3SYG4 887 aa4.3□□□□□ -1.72
LINC00428-201ENST00000415620 ZNF655Q8N720 491 aaPredicted RBP4.3□□□□□ -1.72
LINC00428-201ENST00000415620 SLC16A11Q8NCK7 471 aa4.3□□□□□ -1.72
LINC00428-201ENST00000415620 TCTN2Q96GX1 697 aa4.3□□□□□ -1.72
LINC00428-201ENST00000415620 RHOVQ96L33 236 aa4.3□□□□□ -1.72
LINC00428-201ENST00000415620 TNFRSF10DQ9UBN6 386 aa4.3□□□□□ -1.72
LINC00428-201ENST00000415620 TCFL5Q9UL49 500 aa4.3□□□□□ -1.72
LINC00428-201ENST00000415620 TAF6LQ9Y6J9 622 aa4.3□□□□□ -1.72
LINC00428-201ENST00000415620 LRRC7Q96NW7 1537 aa4.3□□□□□ -1.72
LINC00428-201ENST00000415620 ARHGEF12Q9NZN5 1544 aa4.3□□□□□ -1.72
LINC00428-201ENST00000415620 RGS13O14921 159 aa4.29□□□□□ -1.72
LINC00428-201ENST00000415620 MATN3O15232 486 aa4.29□□□□□ -1.72
LINC00428-201ENST00000415620 TOM1O60784 492 aa4.29□□□□□ -1.72
LINC00428-201ENST00000415620 HTR3BO95264 441 aa4.29□□□□□ -1.72
LINC00428-201ENST00000415620 F13A1P00488 732 aa4.29□□□□□ -1.72
LINC00428-201ENST00000415620 NCKAP1LP55160 1127 aa4.29□□□□□ -1.72
LINC00428-201ENST00000415620 CAMK2GQ13555 558 aaPredicted RBP4.29□□□□□ -1.72
LINC00428-201ENST00000415620 MLECQ14165 292 aa4.29□□□□□ -1.72
LINC00428-201ENST00000415620 CBX2Q14781 532 aaPredicted RBP4.29□□□□□ -1.72
LINC00428-201ENST00000415620 NT5DC1Q5TFE4 455 aa4.29□□□□□ -1.72
LINC00428-201ENST00000415620 FERMT3Q86UX7 667 aa4.29□□□□□ -1.72
LINC00428-201ENST00000415620 DUSP9Q99956 384 aaKnown RBP4.29□□□□□ -1.72
LINC00428-201ENST00000415620 SMPD4Q9NXE4 827 aa4.29□□□□□ -1.72
LINC00428-201ENST00000415620 USP31Q70CQ4 1352 aa4.28□□□□□ -1.72
LINC00428-201ENST00000415620 IRS2Q9Y4H2 1338 aa4.28□□□□□ -1.72
LINC00428-201ENST00000415620 FADS2P1A8MWK0 482 aa4.28□□□□□ -1.72
LINC00428-201ENST00000415620 NUDT19A8MXV4 375 aa4.28□□□□□ -1.72
LINC00428-201ENST00000415620 UBOX5O94941 541 aa4.28□□□□□ -1.72
LINC00428-201ENST00000415620 BPNT1O95861 308 aa4.28□□□□□ -1.72
LINC00428-201ENST00000415620 YY1P25490 414 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms