RNA–Protein interactions for RNA: ENST00000415455.5

MUC4-206, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-206ENST00000415455 CCDC17Q96LX7 622 aa12.4□□□□□ -0.42
MUC4-206ENST00000415455 TMEM39BQ9GZU3 492 aa12.4□□□□□ -0.42
MUC4-206ENST00000415455 KANSL2Q9H9L4 492 aa12.4□□□□□ -0.42
MUC4-206ENST00000415455 SWAP70Q9UH65 585 aa12.4□□□□□ -0.42
MUC4-206ENST00000415455 NWD2Q9ULI1 1742 aa12.4□□□□□ -0.42
MUC4-206ENST00000415455 SPDYE3A6NKU9 549 aa12.4□□□□□ -0.42
MUC4-206ENST00000415455 TRIM21P19474 475 aaKnown RBP12.4□□□□□ -0.42
MUC4-206ENST00000415455 FKBP15Q5T1M5 1219 aa12.4□□□□□ -0.42
MUC4-206ENST00000415455 APOBEC3HQ6NTF7 200 aaKnown RBP12.4□□□□□ -0.42
MUC4-206ENST00000415455 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.4□□□□□ -0.42
MUC4-206ENST00000415455 IGSF22Q8N9C0 903 aa12.4□□□□□ -0.42
MUC4-206ENST00000415455 MTMR4Q9NYA4 1195 aa12.4□□□□□ -0.42
MUC4-206ENST00000415455 UBR2Q8IWV8 1755 aa12.4□□□□□ -0.42
MUC4-206ENST00000415455 ARID5AQ03989 594 aa12.4□□□□□ -0.42
MUC4-206ENST00000415455 HHIPL2Q6UWX4 724 aa12.4□□□□□ -0.42
MUC4-206ENST00000415455 USP49Q70CQ1 688 aa12.4□□□□□ -0.42
MUC4-206ENST00000415455 ZNF408Q9H9D4 720 aa12.4□□□□□ -0.42
MUC4-206ENST00000415455 SAMSN1Q9NSI8 373 aaKnown RBP12.4□□□□□ -0.42
MUC4-206ENST00000415455 GUCA1BQ9UMX6 200 aa12.4□□□□□ -0.42
MUC4-206ENST00000415455 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.4□□□□□ -0.42
MUC4-206ENST00000415455 USP17L10C9JJH3 530 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 EVCP57679 992 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 TNIP1Q15025 636 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 DACT2Q5SW24 774 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 FAM205AQ6ZU69 1335 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 FMR1NBQ8N0W7 255 aaPredicted RBP12.39□□□□□ -0.43
MUC4-206ENST00000415455 CCDC102AQ96A19 550 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 LZTS2Q9BRK4 669 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 SHANK3Q9BYB0 1731 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 BMP15O95972 392 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 TECP42680 631 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 UBXN2AP68543 259 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 UBXN1Q04323 297 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 GRIN1Q05586 938 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 MCM6Q14566 821 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 SHROOM1Q2M3G4 852 aaPredicted RBP12.39□□□□□ -0.43
MUC4-206ENST00000415455 TDRD12Q587J7 1177 aaKnown RBP12.39□□□□□ -0.43
MUC4-206ENST00000415455 KANK3Q6NY19 840 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 RSBN1LQ6PCB5 846 aaPredicted RBP12.39□□□□□ -0.43
MUC4-206ENST00000415455 IQUBQ8NA54 791 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 SLC16A10Q8TF71 515 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 SYMPKQ92797 1274 aaKnown RBP12.39□□□□□ -0.43
MUC4-206ENST00000415455 PSTPIP2Q9H939 334 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 SALL1Q9NSC2 1324 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 RASSF7Q02833 373 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 CXCL9Q07325 125 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 PFKFB3Q16875 520 aaPredicted RBP12.39□□□□□ -0.43
MUC4-206ENST00000415455 HSP90B2PQ58FF3 399 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 ZNF569Q5MCW4 686 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 WWC2Q6AWC2 1192 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 FOXP4Q8IVH2 680 aaPredicted RBP12.39□□□□□ -0.43
MUC4-206ENST00000415455 SUGT1Q9Y2Z0 365 aa12.39□□□□□ -0.43
MUC4-206ENST00000415455 KIF2AO00139 706 aaPredicted RBP12.38□□□□□ -0.43
MUC4-206ENST00000415455 RHOXF2BP0C7M4 288 aa12.38□□□□□ -0.43
MUC4-206ENST00000415455 DYMQ7RTS9 669 aa12.38□□□□□ -0.43
MUC4-206ENST00000415455 CALML4Q96GE6 196 aa12.38□□□□□ -0.43
MUC4-206ENST00000415455 CAPZA3Q96KX2 299 aa12.38□□□□□ -0.43
MUC4-206ENST00000415455 RHOXF2Q9BQY4 288 aa12.38□□□□□ -0.43
MUC4-206ENST00000415455 TMEM260Q9NX78 707 aa12.38□□□□□ -0.43
MUC4-206ENST00000415455 PPARDQ03181 441 aa12.38□□□□□ -0.43
MUC4-206ENST00000415455 GPR162Q16538 588 aa12.38□□□□□ -0.43
MUC4-206ENST00000415455 NBPF9Q3BBW0 867 aa12.38□□□□□ -0.43
MUC4-206ENST00000415455 MMRN2Q9H8L6 949 aa12.38□□□□□ -0.43
MUC4-206ENST00000415455 PCDHA4Q9UN74 947 aa12.38□□□□□ -0.43
MUC4-206ENST00000415455 F5H6K3 240 aa12.38□□□□□ -0.43
MUC4-206ENST00000415455 KLRC3Q07444 240 aa12.38□□□□□ -0.43
MUC4-206ENST00000415455 GRM4Q14833 912 aa12.38□□□□□ -0.43
MUC4-206ENST00000415455 RCSD1Q6JBY9 416 aa12.38□□□□□ -0.43
MUC4-206ENST00000415455 ILDR1Q86SU0 546 aaPredicted RBP12.38□□□□□ -0.43
MUC4-206ENST00000415455 TBCKQ8TEA7 893 aa12.38□□□□□ -0.43
MUC4-206ENST00000415455 RAB34Q9BZG1 259 aa12.38□□□□□ -0.43
MUC4-206ENST00000415455 USP17L15C9J2P7 530 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 USP17L13C9JLJ4 530 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 USP17L11C9JVI0 530 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 USP17L18D6R9N7 530 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 USP17L22D6RA61 530 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 USP17L17D6RBQ6 530 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 USP17L19D6RCP7 530 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 USP17L20D6RJB6 530 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 PHACTR2O75167 634 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 USP17L24Q0WX57 530 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 GPS2Q13227 327 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 USP17L6PQ6QN14 398 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 MRFAP1L1Q96HT8 127 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 MTA3Q9BTC8 594 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 TBC1D7Q9P0N9 293 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 SYNRGQ9UMZ2 1314 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 A0A1W2PQ27 194 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 A0A1W2PQ64 194 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 A0A1W2PQD8 194 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 PRR29P0C7W0 189 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 EAPPQ56P03 285 aaPredicted RBP12.37□□□□□ -0.43
MUC4-206ENST00000415455 TCERG1LQ5VWI1 586 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 SHC4Q6S5L8 630 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 CACNA2D4Q7Z3S7 1137 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 MTFR1LQ9H019 292 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.37□□□□□ -0.43
MUC4-206ENST00000415455 TJP1Q07157 1748 aa12.37□□□□□ -0.43
MUC4-206ENST00000415455 PDS5AQ29RF7 1337 aaKnown RBP12.37□□□□□ -0.43
MUC4-206ENST00000415455 STK36Q9NRP7 1315 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms