RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 KIF20AO95235 890 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 EGFRP00533 1210 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 GOLGA8HP0CJ92 632 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 SLURP2P0DP57 97 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 NLRP5P59047 1200 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 ATP2B2Q01814 1243 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 NCBP1Q09161 790 aaKnown RBP13.16□□□□□ -0.3
RFFL-205ENST00000415395 SLC39A14Q15043 492 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 NPY5RQ15761 445 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 TBC1D10BQ4KMP7 808 aaPredicted RBP13.16□□□□□ -0.3
RFFL-205ENST00000415395 C11orf57Q6ZUT1 292 aaPredicted RBP13.16□□□□□ -0.3
RFFL-205ENST00000415395 SAMD7Q7Z3H4 446 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 SIAH1Q8IUQ4 282 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 KIF18AQ8NI77 898 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 TSC1Q92574 1164 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 TNFRSF25Q93038 417 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 TEPSINQ96N21 525 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.16□□□□□ -0.3
RFFL-205ENST00000415395 HACL1Q9UJ83 578 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 CEP131Q9UPN4 1083 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 MTMR7Q9Y216 660 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 PPP2R3BQ9Y5P8 575 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 CLIC4Q9Y696 253 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 ESYT2A0FGR8 921 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 STXBP3O00186 592 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 BMP15O95972 392 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 CAP2P40123 477 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 TRAPPC10P48553 1259 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 CBX1P83916 185 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 SNW1Q13573 536 aaKnown RBP13.16□□□□□ -0.3
RFFL-205ENST00000415395 WWC2Q6AWC2 1192 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 PPP1R18Q6NYC8 613 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 MTMR8Q96EF0 704 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 ERO1AQ96HE7 468 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 FTOQ9C0B1 505 aaKnown RBP eCLIP13.16□□□□□ -0.3
RFFL-205ENST00000415395 SH2D4AQ9H788 454 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 PRDM4Q9UKN5 801 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 ZBTB21Q9ULJ3 1066 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 PCDHA4Q9UN74 947 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 FRMPD2Q68DX3 1309 aaPredicted RBP13.15□□□□□ -0.3
RFFL-205ENST00000415395 PITPNM2Q9BZ72 1349 aa13.15□□□□□ -0.3
RFFL-205ENST00000415395 ZC3H4Q9UPT8 1303 aaKnown RBP13.15□□□□□ -0.3
RFFL-205ENST00000415395 ASNSP08243 561 aa13.15□□□□□ -0.3
RFFL-205ENST00000415395 SLC1A4P43007 532 aa13.15□□□□□ -0.3
RFFL-205ENST00000415395 NR5A1Q13285 461 aa13.15□□□□□ -0.3
RFFL-205ENST00000415395 RRP1BQ14684 758 aaKnown RBP13.15□□□□□ -0.3
RFFL-205ENST00000415395 CCDC96Q2M329 555 aa13.15□□□□□ -0.3
RFFL-205ENST00000415395 SLFN13Q68D06 897 aa13.15□□□□□ -0.3
RFFL-205ENST00000415395 DHX40Q8IX18 779 aaKnown RBP13.15□□□□□ -0.3
RFFL-205ENST00000415395 BLIDQ8IZY5 108 aa13.15□□□□□ -0.3
RFFL-205ENST00000415395 FMR1NBQ8N0W7 255 aaPredicted RBP13.15□□□□□ -0.3
RFFL-205ENST00000415395 OXER1Q8TDS5 423 aa13.15□□□□□ -0.3
RFFL-205ENST00000415395 ZMYND12Q9H0C1 365 aa13.15□□□□□ -0.3
RFFL-205ENST00000415395 GOLPH3LQ9H4A5 285 aa13.15□□□□□ -0.3
RFFL-205ENST00000415395 RNF181Q9P0P0 153 aa13.15□□□□□ -0.3
RFFL-205ENST00000415395 DOCK1Q14185 1865 aa13.14□□□□□ -0.31
RFFL-205ENST00000415395 PNMA6FA0A0J9YX94 578 aa13.14□□□□□ -0.31
RFFL-205ENST00000415395 F5H6K3 240 aa13.14□□□□□ -0.31
RFFL-205ENST00000415395 CBFA2T2O43439 604 aa13.14□□□□□ -0.31
RFFL-205ENST00000415395 YBX3P16989 372 aaKnown RBP eCLIP13.14□□□□□ -0.31
RFFL-205ENST00000415395 GNA11P29992 359 aa13.14□□□□□ -0.31
RFFL-205ENST00000415395 GABPB1Q06547 395 aaPredicted RBP13.14□□□□□ -0.31
RFFL-205ENST00000415395 KLRC3Q07444 240 aa13.14□□□□□ -0.31
RFFL-205ENST00000415395 PTPAQ15257 358 aa13.14□□□□□ -0.31
RFFL-205ENST00000415395 CCDC144BQ3MJ40 725 aa13.14□□□□□ -0.31
RFFL-205ENST00000415395 DCAF15Q66K64 600 aa13.14□□□□□ -0.31
RFFL-205ENST00000415395 NYAP1Q6ZVC0 841 aa13.14□□□□□ -0.31
RFFL-205ENST00000415395 RASGRP2Q7LDG7 609 aa13.14□□□□□ -0.31
RFFL-205ENST00000415395 HEATR3Q7Z4Q2 680 aa13.14□□□□□ -0.31
RFFL-205ENST00000415395 AOPEPQ8N6M6 819 aa13.14□□□□□ -0.31
RFFL-205ENST00000415395 ZNF397Q8NF99 534 aaPredicted RBP13.14□□□□□ -0.31
RFFL-205ENST00000415395 DEFB129Q9H1M3 183 aa13.14□□□□□ -0.31
RFFL-205ENST00000415395 GOPCQ9HD26 462 aa13.14□□□□□ -0.31
RFFL-205ENST00000415395 TMX2Q9Y320 296 aa13.14□□□□□ -0.31
RFFL-205ENST00000415395 M0R2N6 131 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 LMOD1P29536 600 aaPredicted RBP13.13□□□□□ -0.31
RFFL-205ENST00000415395 TOB1P50616 345 aaPredicted RBP13.13□□□□□ -0.31
RFFL-205ENST00000415395 JAG1P78504 1218 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 SHROOM1Q2M3G4 852 aaPredicted RBP13.13□□□□□ -0.31
RFFL-205ENST00000415395 ADGRF4Q8IZF3 695 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 CCAR2Q8N163 923 aaKnown RBP13.13□□□□□ -0.31
RFFL-205ENST00000415395 ZNF592Q92610 1267 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 GPKOWQ92917 476 aaPredicted RBP eCLIP13.13□□□□□ -0.31
RFFL-205ENST00000415395 TIGD1Q96MW7 591 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 PIGSQ96S52 555 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 UBA5Q9GZZ9 404 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 C6orf50Q9HD87 102 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 GPCPD1Q9NPB8 672 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 KIAA1468Q9P260 1216 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 PCDHA7Q9UN72 937 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 PHF20L1A8MW92 1017 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 CTNND1O60716 968 aaKnown RBP13.13□□□□□ -0.31
RFFL-205ENST00000415395 NDUFB10O96000 172 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 VEGFAP15692 232 aaPredicted RBP13.13□□□□□ -0.31
RFFL-205ENST00000415395 ZSCAN20P17040 1043 aaPredicted RBP13.13□□□□□ -0.31
RFFL-205ENST00000415395 NAPAP54920 295 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 NLRP12P59046 1061 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 FAM193AP78312 1265 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 BTNL9Q6UXG8 535 aa13.13□□□□□ -0.31
RFFL-205ENST00000415395 MIGA2Q7L4E1 593 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms