RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 RETREG1Q9H6L5 497 aa4.62□□□□□ -1.67
LINC01048-201ENST00000414480 AKTIPQ9H8T0 292 aa4.62□□□□□ -1.67
LINC01048-201ENST00000414480 AS3MTQ9HBK9 375 aa4.62□□□□□ -1.67
LINC01048-201ENST00000414480 PCDH12Q9NPG4 1184 aa4.62□□□□□ -1.67
LINC01048-201ENST00000414480 SMC4Q9NTJ3 1288 aa4.62□□□□□ -1.67
LINC01048-201ENST00000414480 IFT57Q9NWB7 429 aa4.62□□□□□ -1.67
LINC01048-201ENST00000414480 PIM2Q9P1W9 311 aa4.62□□□□□ -1.67
LINC01048-201ENST00000414480 BIN2Q9UBW5 565 aaPredicted RBP4.62□□□□□ -1.67
LINC01048-201ENST00000414480 ZNF652Q9Y2D9 606 aa4.62□□□□□ -1.67
LINC01048-201ENST00000414480 RABGAP1Q9Y3P9 1069 aa4.62□□□□□ -1.67
LINC01048-201ENST00000414480 TTC21BQ7Z4L5 1316 aa4.62□□□□□ -1.67
LINC01048-201ENST00000414480 PALLDQ8WX93 1383 aa4.62□□□□□ -1.67
LINC01048-201ENST00000414480 LTBP1Q14766 1721 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 DEAF1O75398 565 aaPredicted RBP4.61□□□□□ -1.67
LINC01048-201ENST00000414480 MTA2O94776 668 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 TAL1P17542 331 aaPredicted RBP4.61□□□□□ -1.67
LINC01048-201ENST00000414480 TRAPPC10P48553 1259 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 CLDN10P78369 228 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 CCT2P78371 535 aaKnown RBP4.61□□□□□ -1.67
LINC01048-201ENST00000414480 CHAF1AQ13111 956 aaPredicted RBP4.61□□□□□ -1.67
LINC01048-201ENST00000414480 PPP2R5AQ15172 486 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 TOMM20Q15388 145 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 MAPRE1Q15691 268 aaKnown RBP4.61□□□□□ -1.67
LINC01048-201ENST00000414480 ALDH1L2Q3SY69 923 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 MAP9Q49MG5 647 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 ZNF394Q53GI3 561 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 DALRD3Q5D0E6 543 aaKnown RBP4.61□□□□□ -1.67
LINC01048-201ENST00000414480 SYCP2LQ5T4T6 812 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 LCE1DQ5T752 114 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 C1QTNF12Q5T7M4 302 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 DHX32Q7L7V1 743 aaKnown RBP4.61□□□□□ -1.67
LINC01048-201ENST00000414480 HDGFL2Q7Z4V5 671 aaPredicted RBP4.61□□□□□ -1.67
LINC01048-201ENST00000414480 PLEKHM2Q8IWE5 1019 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 TMEM130Q8N3G9 435 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 GAS2L2Q8NHY3 880 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 TRPM4Q8TD43 1214 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 DCAF11Q8TEB1 546 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 ANKRD24Q8TF21 1146 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 ZNF512BQ96KM6 892 aaPredicted RBP4.61□□□□□ -1.67
LINC01048-201ENST00000414480 POLR3CQ9BUI4 534 aaPredicted RBP4.61□□□□□ -1.67
LINC01048-201ENST00000414480 C2orf49Q9BVC5 232 aaPredicted RBP4.61□□□□□ -1.67
LINC01048-201ENST00000414480 MRPL18Q9H0U6 180 aaKnown RBP4.61□□□□□ -1.67
LINC01048-201ENST00000414480 PPCSQ9HAB8 311 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 DDX56Q9NY93 547 aaKnown RBP4.61□□□□□ -1.67
LINC01048-201ENST00000414480 EVLQ9UI08 416 aaPredicted RBP4.61□□□□□ -1.67
LINC01048-201ENST00000414480 DMGDHQ9UI17 866 aaKnown RBP4.61□□□□□ -1.67
LINC01048-201ENST00000414480 RNF114Q9Y508 228 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 KIF16BQ96L93 1317 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 WDR33Q9C0J8 1336 aaKnown RBP4.61□□□□□ -1.67
LINC01048-201ENST00000414480 MEGF6O75095 1541 aa4.61□□□□□ -1.67
LINC01048-201ENST00000414480 MAP2P11137 1827 aaKnown RBP4.6□□□□□ -1.67
LINC01048-201ENST00000414480 CCDC66A2RUB6 948 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 USP17L3A6NCW0 530 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 USP17L4A6NCW7 530 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 PALM3A6NDB9 673 aaPredicted RBP4.6□□□□□ -1.67
LINC01048-201ENST00000414480 NFKBIEO00221 500 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 C21orf2O43822 256 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 KIAA0754O94854 1291 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 ATG7O95352 703 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 IGHDP01880 384 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 GYS1P13807 737 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 CHRNA5P30532 468 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 FXR1P51114 621 aaKnown RBP eCLIP4.6□□□□□ -1.67
LINC01048-201ENST00000414480 GTF2A1P52655 376 aaPredicted RBP4.6□□□□□ -1.67
LINC01048-201ENST00000414480 GP2P55259 537 aaKnown RBP4.6□□□□□ -1.67
LINC01048-201ENST00000414480 SOX10P56693 466 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 SESN3P58005 492 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 SRPK2P78362 688 aaKnown RBP4.6□□□□□ -1.67
LINC01048-201ENST00000414480 GPLD1P80108 840 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 ITPK1Q13572 414 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 UBE4AQ14139 1066 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 COL19A1Q14993 1142 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 RTN1Q16799 776 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 LONRF1Q17RB8 773 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 DEFB115Q30KQ5 88 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 B4GALNT3Q6L9W6 998 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 USP17L2Q6R6M4 530 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 USP17L1Q7RTZ2 530 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 CHPFQ8IZ52 775 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 SIX5Q8N196 739 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 MYO1HQ8N1T3 1032 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 NLGN1Q8N2Q7 840 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 SAMD3Q8N6K7 520 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 TSEN2Q8NCE0 465 aaKnown RBP4.6□□□□□ -1.67
LINC01048-201ENST00000414480 SMCR8Q8TEV9 937 aaPredicted RBP4.6□□□□□ -1.67
LINC01048-201ENST00000414480 TBC1D31Q96DN5 1066 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 MPHOSPH9Q99550 1183 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 ALDH8A1Q9H2A2 487 aaPredicted RBP4.6□□□□□ -1.67
LINC01048-201ENST00000414480 CAPN10Q9HC96 672 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 SRA1Q9HD15 236 aaKnown RBP4.6□□□□□ -1.67
LINC01048-201ENST00000414480 C11orf16Q9NQ32 467 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 IP6K2Q9UHH9 426 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 OAS3Q9Y6K5 1087 aaKnown RBP4.6□□□□□ -1.67
LINC01048-201ENST00000414480 DDX49Q9Y6V7 483 aaKnown RBP4.6□□□□□ -1.67
LINC01048-201ENST00000414480 USP31Q70CQ4 1352 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 FAM208AQ9UK61 1670 aaKnown RBP4.6□□□□□ -1.67
LINC01048-201ENST00000414480 C4AP0C0L4 1744 aa4.6□□□□□ -1.67
LINC01048-201ENST00000414480 SHTN1A0MZ66 631 aa4.59□□□□□ -1.67
LINC01048-201ENST00000414480 ANKRD33BA6NCL7 494 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms