RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 RBM28Q9NW13 759 aaKnown RBP12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 MORF4L1Q9UBU8 362 aa12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 CCPG1Q9ULG6 757 aa12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 hCG_1642624A0A1W2PR95 340 aa12.12□□□□□ -0.47
HLA-DMB-257ENST00000414017 TNPO2O14787 897 aaKnown RBP12.12□□□□□ -0.47
HLA-DMB-257ENST00000414017 ST18O60284 1047 aa12.12□□□□□ -0.47
HLA-DMB-257ENST00000414017 PDIA3P30101 505 aaKnown RBP12.12□□□□□ -0.47
HLA-DMB-257ENST00000414017 CDC27P30260 824 aa12.12□□□□□ -0.47
HLA-DMB-257ENST00000414017 ADD1P35611 737 aaKnown RBP12.12□□□□□ -0.47
HLA-DMB-257ENST00000414017 LACTBP83111 547 aaPredicted RBP12.12□□□□□ -0.47
HLA-DMB-257ENST00000414017 SRBD1Q8N5C6 995 aaKnown RBP12.12□□□□□ -0.47
HLA-DMB-257ENST00000414017 IL17RAQ96F46 866 aa12.12□□□□□ -0.47
HLA-DMB-257ENST00000414017 ERO1AQ96HE7 468 aa12.12□□□□□ -0.47
HLA-DMB-257ENST00000414017 PIGSQ96S52 555 aa12.12□□□□□ -0.47
HLA-DMB-257ENST00000414017 MOV10L1Q9BXT6 1211 aaKnown RBP12.12□□□□□ -0.47
HLA-DMB-257ENST00000414017 AGXT2Q9BYV1 514 aa12.12□□□□□ -0.47
HLA-DMB-257ENST00000414017 SLKQ9H2G2 1235 aaPredicted RBP12.12□□□□□ -0.47
HLA-DMB-257ENST00000414017 JMJD4Q9H9V9 463 aa12.12□□□□□ -0.47
HLA-DMB-257ENST00000414017 TPCN1Q9ULQ1 816 aa12.12□□□□□ -0.47
HLA-DMB-257ENST00000414017 CPLX1O14810 134 aa12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 DTNBO60941 627 aa12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 LARGE1O95461 756 aa12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 FDX1P10109 184 aa12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 ERCC3P19447 782 aa12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 FCGRTP55899 365 aa12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 QRICH1Q2TAL8 776 aa12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 TMTC3Q6ZXV5 915 aa12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 NECAB1Q8N987 351 aa12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 REPS2Q8NFH8 660 aa12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 RRP36Q96EU6 259 aaKnown RBP12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 MAP3K14Q99558 947 aa12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 LZTS2Q9BRK4 669 aa12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 TEX13BQ9BXU2 312 aa12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 RANBP17Q9H2T7 1088 aaKnown RBP12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 SEC63Q9UGP8 760 aaKnown RBP12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 ADAMTS5Q9UNA0 930 aa12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 HPS5Q9UPZ3 1129 aa12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 TRIM17Q9Y577 477 aa12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 IVNS1ABPQ9Y6Y0 642 aa12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 RLFQ13129 1914 aa12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 COL11A1P12107 1806 aaPredicted RBP12.11□□□□□ -0.47
HLA-DMB-257ENST00000414017 PARP14Q460N5 1801 aa12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 CCDC196A0A1B0GTZ2 297 aa12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 CYTH3O43739 400 aa12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 CTGFP29279 349 aa12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 MAPK4P31152 587 aa12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 SLC35G1Q2M3R5 365 aa12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 PLEKHH3Q7Z736 793 aa12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 FBXO11Q86XK2 927 aa12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 RIOX2Q8IUF8 465 aa12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 FBXL16Q8N461 479 aa12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 COA7Q96BR5 231 aa12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 ZNF274Q96GC6 653 aaPredicted RBP12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 TRIM47Q96LD4 638 aa12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 TRERF1Q96PN7 1200 aa12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 ALDH8A1Q9H2A2 487 aaPredicted RBP12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 RNF146Q9NTX7 359 aa12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 ZNF214Q9UL59 606 aaPredicted RBP12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 RIPK3Q9Y572 518 aa12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 CASP8AP2Q9UKL3 1982 aa12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 ZNF536O15090 1300 aa12.1□□□□□ -0.47
HLA-DMB-257ENST00000414017 BAZ2BQ9UIF8 2168 aaKnown RBP12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 ZSWIM8A7E2V4 1837 aa12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 ZBTB5O15062 677 aa12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 SLC25A27O95847 323 aa12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 ICAM1P05362 532 aa12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 RCAN1P53805 252 aa12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 CAP1Q01518 475 aa12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 AKAP17AQ02040 695 aaKnown RBP12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 SCRN1Q12765 414 aa12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 ARHGEF6Q15052 776 aa12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 ME3Q16798 604 aa12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 CPLX2Q6PUV4 134 aaKnown RBP12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 NSMFQ6X4W1 530 aa12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 GPR142Q7Z601 462 aa12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 PHKBQ93100 1093 aa12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 MMP19Q99542 508 aa12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 SPZ1Q9BXG8 430 aa12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 SLC26A6Q9BXS9 759 aa12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 RIOX1Q9H6W3 641 aa12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 FAM217BQ9NTX9 383 aaPredicted RBP12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 LIMCH1Q9UPQ0 1083 aa12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 V9GY48 417 aaPredicted RBP12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 CNTNAP5Q8WYK1 1306 aa12.09□□□□□ -0.47
HLA-DMB-257ENST00000414017 A0A0G2JMZ2 1700 aa12.08□□□□□ -0.47
HLA-DMB-257ENST00000414017 PNMA6FA0A0J9YX94 578 aa12.08□□□□□ -0.48
HLA-DMB-257ENST00000414017 PFKFB2O60825 505 aa12.08□□□□□ -0.48
HLA-DMB-257ENST00000414017 HOXD10P28358 340 aa12.08□□□□□ -0.48
HLA-DMB-257ENST00000414017 OAZ1P54368 228 aa12.08□□□□□ -0.48
HLA-DMB-257ENST00000414017 EVCP57679 992 aa12.08□□□□□ -0.48
HLA-DMB-257ENST00000414017 NOM1Q5C9Z4 860 aaKnown RBP12.08□□□□□ -0.48
HLA-DMB-257ENST00000414017 MUM1L1Q5H9M0 696 aa12.08□□□□□ -0.48
HLA-DMB-257ENST00000414017 HEATR3Q7Z4Q2 680 aa12.08□□□□□ -0.48
HLA-DMB-257ENST00000414017 CCDC83Q8IWF9 413 aa12.08□□□□□ -0.48
HLA-DMB-257ENST00000414017 ANKRD35Q8N283 1001 aa12.08□□□□□ -0.48
HLA-DMB-257ENST00000414017 GPKOWQ92917 476 aaPredicted RBP eCLIP12.08□□□□□ -0.48
HLA-DMB-257ENST00000414017 AMNQ9BXJ7 453 aa12.08□□□□□ -0.48
HLA-DMB-257ENST00000414017 MROH8Q9H579 483 aa12.08□□□□□ -0.48
HLA-DMB-257ENST00000414017 ACAD9Q9H845 621 aa12.08□□□□□ -0.48
HLA-DMB-257ENST00000414017 PTPDC1A2A3K4 754 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms