RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 IFRD2Q12894 506 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 BMS1Q14692 1282 aaKnown RBP5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 ZNF792Q3KQV3 632 aa5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 GTF2IRD2BQ6EKJ0 949 aa5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 CBLL1Q75N03 491 aa5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 SPATC1Q76KD6 591 aa5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 GTF2IRD2Q86UP8 949 aa5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 PPP1R14AQ96A00 147 aa5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 MRFAP1L1Q96HT8 127 aa5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 FCRL2Q96LA5 508 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 FCRL3Q96P31 734 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 MCMBPQ9BTE3 642 aa5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 SPATA9Q9BWV2 254 aa5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 NKX2-4Q9H2Z4 354 aa5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 PIF1Q9H611 641 aa5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 CYP26B1Q9NR63 512 aa5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 TMEM59LQ9UK28 342 aa5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 OAS3Q9Y6K5 1087 aaKnown RBP5.82□□□□□ -1.48
HMGB1P11-201ENST00000413899 CCDC85CA6NKD9 419 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 FGF10O15520 208 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 TBX1O43435 398 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 ADCY3O60266 1144 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 KCNH1O95259 989 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 SCG5P05408 212 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 CD3EP07766 207 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 GSTM1P09488 218 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 GDNFP39905 211 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 PPP2R2AP63151 447 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 DUSP4Q13115 394 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 LONRF2Q1L5Z9 754 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 EEF1DP3Q658K8 133 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 WAPLQ7Z5K2 1190 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 COPS5Q92905 334 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 SYTL4Q96C24 671 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 MAP6Q96JE9 813 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 CCDC140Q96MF4 163 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 DNAJC7Q99615 494 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 LGR4Q9BXB1 951 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 ADAMTS10Q9H324 1103 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 PRDM7Q9NQW5 492 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 C19orf73Q9NVV2 129 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 GPR55Q9Y2T6 319 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 BACE2Q9Y5Z0 518 aa5.81□□□□□ -1.48
HMGB1P11-201ENST00000413899 DIAPH1O60610 1272 aaKnown RBP5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 FKTNO75072 461 aa5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 VAMP4O75379 141 aa5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 IFNGR1P15260 489 aa5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 RPL10P27635 214 aaKnown RBP5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 HOXC12P31275 282 aa5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 CEBPAP49715 358 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 CYP4F3Q08477 520 aa5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 SSRP1Q08945 709 aaKnown RBP5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 HSP90AA2PQ14568 343 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 RALGPS1Q5JS13 557 aa5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 CYP2R1Q6VVX0 501 aa5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 NOP9Q86U38 636 aaKnown RBP5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 PDZD8Q8NEN9 1154 aa5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 FLAD1Q8NFF5 587 aa5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 BTN2A2Q8WVV5 523 aa5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 AARSD1Q9BTE6 412 aaKnown RBP5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 ARHGEF4Q9NR80 690 aa5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 AP5S1Q9NUS5 200 aa5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 ERVK13-1Q9NX77 482 aa5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 TNFRSF10DQ9UBN6 386 aa5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 ADGRE2Q9UHX3 823 aa5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 CTNND2Q9UQB3 1225 aa5.8□□□□□ -1.48
HMGB1P11-201ENST00000413899 STXBP3O00186 592 aa5.79□□□□□ -1.48
HMGB1P11-201ENST00000413899 FGFR1P11362 822 aa5.79□□□□□ -1.48
HMGB1P11-201ENST00000413899 KIR2DL1P43626 348 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P11-201ENST00000413899 KIR2DL2P43627 348 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P11-201ENST00000413899 CHRNEQ04844 493 aa5.79□□□□□ -1.48
HMGB1P11-201ENST00000413899 NR0B2Q15466 257 aa5.79□□□□□ -1.48
HMGB1P11-201ENST00000413899 TESK1Q15569 626 aa5.79□□□□□ -1.48
HMGB1P11-201ENST00000413899 DPY19L1Q2PZI1 675 aa5.79□□□□□ -1.48
HMGB1P11-201ENST00000413899 ZC3H12BQ5HYM0 836 aaKnown RBP5.79□□□□□ -1.48
HMGB1P11-201ENST00000413899 ZPBP2Q6X784 338 aa5.79□□□□□ -1.48
HMGB1P11-201ENST00000413899 NBPF11Q86T75 865 aa5.79□□□□□ -1.48
HMGB1P11-201ENST00000413899 ANKS4BQ8N8V4 417 aa5.79□□□□□ -1.48
HMGB1P11-201ENST00000413899 ZBTB38Q8NAP3 1195 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P11-201ENST00000413899 HHIPL1Q96JK4 782 aa5.79□□□□□ -1.48
HMGB1P11-201ENST00000413899 PTCHD1Q96NR3 888 aa5.79□□□□□ -1.48
HMGB1P11-201ENST00000413899 CDADC1Q9BWV3 514 aa5.79□□□□□ -1.48
HMGB1P11-201ENST00000413899 RC3H2Q9HBD1 1191 aaKnown RBP5.79□□□□□ -1.48
HMGB1P11-201ENST00000413899 EBF1Q9UH73 591 aa5.79□□□□□ -1.48
HMGB1P11-201ENST00000413899 PFDN2Q9UHV9 154 aa5.79□□□□□ -1.48
HMGB1P11-201ENST00000413899 KDM2BQ8NHM5 1336 aa5.78□□□□□ -1.48
HMGB1P11-201ENST00000413899 C2orf71A6NGG8 1288 aa5.78□□□□□ -1.48
HMGB1P11-201ENST00000413899 FADS2P1A8MWK0 482 aa5.78□□□□□ -1.48
HMGB1P11-201ENST00000413899 CPP00450 1065 aa5.78□□□□□ -1.48
HMGB1P11-201ENST00000413899 HPXP02790 462 aa5.78□□□□□ -1.48
HMGB1P11-201ENST00000413899 GFRA1P56159 465 aa5.78□□□□□ -1.48
HMGB1P11-201ENST00000413899 MAP4K2Q12851 820 aa5.78□□□□□ -1.48
HMGB1P11-201ENST00000413899 ATG4DQ86TL0 474 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P11-201ENST00000413899 LILRB2Q8N423 598 aa5.78□□□□□ -1.48
HMGB1P11-201ENST00000413899 TMEM52Q8NDY8 209 aa5.78□□□□□ -1.48
HMGB1P11-201ENST00000413899 THAP3Q8WTV1 239 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P11-201ENST00000413899 SP110Q9HB58 689 aa5.78□□□□□ -1.48
HMGB1P11-201ENST00000413899 TRBV23OR9-2A0A075B6M9 112 aa5.77□□□□□ -1.49
HMGB1P11-201ENST00000413899 TRAV20A0A0B4J274 112 aa5.77□□□□□ -1.49
HMGB1P11-201ENST00000413899 FITM1A5D6W6 292 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms