RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 ROBO3Q96MS0 1386 aa9.95□□□□□ -0.82
UPF3AP1-201ENST00000413731 MAGEB6P1A0A0J9YX57 407 aa9.94□□□□□ -0.82
UPF3AP1-201ENST00000413731 POLR3DP05423 398 aaPredicted RBP9.94□□□□□ -0.82
UPF3AP1-201ENST00000413731 IFIT2P09913 472 aaKnown RBP9.94□□□□□ -0.82
UPF3AP1-201ENST00000413731 FOSL2P15408 326 aa9.94□□□□□ -0.82
UPF3AP1-201ENST00000413731 ADCYAP1R1P41586 468 aa9.94□□□□□ -0.82
UPF3AP1-201ENST00000413731 EPHB4P54760 987 aa9.94□□□□□ -0.82
UPF3AP1-201ENST00000413731 SMAD3P84022 425 aaKnown RBP9.94□□□□□ -0.82
UPF3AP1-201ENST00000413731 MAP3K12Q12852 859 aa9.94□□□□□ -0.82
UPF3AP1-201ENST00000413731 PLS1Q14651 629 aa9.94□□□□□ -0.82
UPF3AP1-201ENST00000413731 COG2Q14746 738 aa9.94□□□□□ -0.82
UPF3AP1-201ENST00000413731 QPCTQ16769 361 aa9.94□□□□□ -0.82
UPF3AP1-201ENST00000413731 NCAPG2Q86XI2 1143 aa9.94□□□□□ -0.82
UPF3AP1-201ENST00000413731 SPICE1Q8N0Z3 855 aa9.94□□□□□ -0.82
UPF3AP1-201ENST00000413731 ATG4CQ96DT6 458 aa9.94□□□□□ -0.82
UPF3AP1-201ENST00000413731 MAML3Q96JK9 1138 aa9.94□□□□□ -0.82
UPF3AP1-201ENST00000413731 METRNQ9UJH8 293 aa9.94□□□□□ -0.82
UPF3AP1-201ENST00000413731 LRRC37A2A6NM11 1700 aa9.93□□□□□ -0.82
UPF3AP1-201ENST00000413731 FLOT1O75955 427 aa9.93□□□□□ -0.82
UPF3AP1-201ENST00000413731 PDE6AP16499 860 aa9.93□□□□□ -0.82
UPF3AP1-201ENST00000413731 NDUFV2P19404 249 aa9.93□□□□□ -0.82
UPF3AP1-201ENST00000413731 IRX6P78412 446 aaPredicted RBP9.93□□□□□ -0.82
UPF3AP1-201ENST00000413731 TLE2Q04725 743 aa9.93□□□□□ -0.82
UPF3AP1-201ENST00000413731 C1orf53Q5VUE5 145 aa9.93□□□□□ -0.82
UPF3AP1-201ENST00000413731 ZNF710Q8N1W2 664 aa9.93□□□□□ -0.82
UPF3AP1-201ENST00000413731 LCORLQ8N3X6 602 aa9.93□□□□□ -0.82
UPF3AP1-201ENST00000413731 SDR42E1Q8WUS8 393 aa9.93□□□□□ -0.82
UPF3AP1-201ENST00000413731 RNPC3Q96LT9 517 aaKnown RBP9.93□□□□□ -0.82
UPF3AP1-201ENST00000413731 LRRCC1Q9C099 1032 aa9.93□□□□□ -0.82
UPF3AP1-201ENST00000413731 MCM9Q9NXL9 1143 aa9.93□□□□□ -0.82
UPF3AP1-201ENST00000413731 PHF24Q9UPV7 400 aa9.93□□□□□ -0.82
UPF3AP1-201ENST00000413731 PCDHB15Q9Y5E8 787 aa9.93□□□□□ -0.82
UPF3AP1-201ENST00000413731 A0A1W2PQ45 241 aaPredicted RBP9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 A0A1W2PQY0 241 aa9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 SMIM22K7EJ46 135 aa9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 STRNO43815 780 aa9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 PQBP1O60828 265 aaKnown RBP9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 PGK1P00558 417 aa9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 CLTBP09497 229 aa9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 NUDT7P0C024 238 aa9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 AKR1B1P15121 316 aa9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 TAL1P17542 331 aaPredicted RBP9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 ICA1Q05084 483 aa9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 AAMPQ13685 434 aa9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 TMEM179Q6ZVK1 233 aa9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 ABRAQ8N0Z2 381 aa9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 MB21D1Q8N884 522 aa9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 USP38Q8NB14 1042 aa9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 EXOC6Q8TAG9 804 aa9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 DYNLL2Q96FJ2 89 aa9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 CRNKL1Q9BZJ0 848 aaKnown RBP9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 MROH8Q9H579 483 aa9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 DCP1AQ9NPI6 582 aaPredicted RBP9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 XPNPEP3Q9NQH7 507 aa9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 HOXC10Q9NYD6 342 aa9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 NCOR1O75376 2440 aa9.92□□□□□ -0.82
UPF3AP1-201ENST00000413731 ZNF532Q9HCE3 1301 aa9.91□□□□□ -0.82
UPF3AP1-201ENST00000413731 TCRBV5S4A2TA0A5A2 114 aa9.91□□□□□ -0.82
UPF3AP1-201ENST00000413731 SMARCA5O60264 1052 aaPredicted RBP9.91□□□□□ -0.82
UPF3AP1-201ENST00000413731 LILRB3O75022 631 aa9.91□□□□□ -0.82
UPF3AP1-201ENST00000413731 PGK2P07205 417 aa9.91□□□□□ -0.82
UPF3AP1-201ENST00000413731 RARBP10826 455 aa9.91□□□□□ -0.82
UPF3AP1-201ENST00000413731 TMEM132BQ14DG7 1078 aa9.91□□□□□ -0.82
UPF3AP1-201ENST00000413731 SLFNL1Q499Z3 407 aa9.91□□□□□ -0.82
UPF3AP1-201ENST00000413731 TMED8Q6PL24 325 aaPredicted RBP9.91□□□□□ -0.82
UPF3AP1-201ENST00000413731 SIAH1Q8IUQ4 282 aa9.91□□□□□ -0.82
UPF3AP1-201ENST00000413731 GPATCH3Q96I76 525 aa9.91□□□□□ -0.82
UPF3AP1-201ENST00000413731 MMP19Q99542 508 aa9.91□□□□□ -0.82
UPF3AP1-201ENST00000413731 VCPKMTQ9H867 229 aa9.91□□□□□ -0.82
UPF3AP1-201ENST00000413731 ARHGEF10LQ9HCE6 1279 aa9.91□□□□□ -0.82
UPF3AP1-201ENST00000413731 PRDM6Q9NQX0 595 aa9.91□□□□□ -0.82
UPF3AP1-201ENST00000413731 FBXO28Q9NVF7 368 aa9.91□□□□□ -0.82
UPF3AP1-201ENST00000413731 SLC5A4Q9NY91 659 aa9.91□□□□□ -0.82
UPF3AP1-201ENST00000413731 TMEM265A0A087WTH1 108 aa9.9□□□□□ -0.82
UPF3AP1-201ENST00000413731 CYP2D7A0A087X1C5 515 aa9.9□□□□□ -0.82
UPF3AP1-201ENST00000413731 KIAA0355O15063 1070 aa9.9□□□□□ -0.82
UPF3AP1-201ENST00000413731 WDR46O15213 610 aaKnown RBP9.9□□□□□ -0.82
UPF3AP1-201ENST00000413731 FCER1AP12319 257 aa9.9□□□□□ -0.82
UPF3AP1-201ENST00000413731 RFX1P22670 979 aa9.9□□□□□ -0.82
UPF3AP1-201ENST00000413731 DNAJB2P25686 324 aa9.9□□□□□ -0.82
UPF3AP1-201ENST00000413731 FPGSQ05932 587 aa9.9□□□□□ -0.82
UPF3AP1-201ENST00000413731 GRIN2CQ14957 1233 aa9.9□□□□□ -0.82
UPF3AP1-201ENST00000413731 SLC9C2Q5TAH2 1124 aa9.9□□□□□ -0.82
UPF3AP1-201ENST00000413731 NUDT18Q6ZVK8 323 aa9.9□□□□□ -0.82
UPF3AP1-201ENST00000413731 RDH13Q8NBN7 331 aa9.9□□□□□ -0.82
UPF3AP1-201ENST00000413731 DNAJC2Q99543 621 aaKnown RBP9.9□□□□□ -0.82
UPF3AP1-201ENST00000413731 DCTPP1Q9H773 170 aa9.9□□□□□ -0.82
UPF3AP1-201ENST00000413731 ARMT1Q9H993 441 aa9.9□□□□□ -0.82
UPF3AP1-201ENST00000413731 TMX2Q9Y320 296 aa9.9□□□□□ -0.82
UPF3AP1-201ENST00000413731 LCTP09848 1927 aa9.9□□□□□ -0.83
UPF3AP1-201ENST00000413731 SYNRGQ9UMZ2 1314 aa9.89□□□□□ -0.83
UPF3AP1-201ENST00000413731 TCF20Q9UGU0 1960 aaKnown RBP9.89□□□□□ -0.83
UPF3AP1-201ENST00000413731 MYADML2A6NDP7 307 aa9.89□□□□□ -0.83
UPF3AP1-201ENST00000413731 GOLIM4O00461 696 aa9.89□□□□□ -0.83
UPF3AP1-201ENST00000413731 PRKAB2O43741 272 aa9.89□□□□□ -0.83
UPF3AP1-201ENST00000413731 ADAMTS4O75173 837 aa9.89□□□□□ -0.83
UPF3AP1-201ENST00000413731 ZNF865P0CJ78 1059 aaPredicted RBP9.89□□□□□ -0.83
UPF3AP1-201ENST00000413731 AKR1A1P14550 325 aa9.89□□□□□ -0.83
UPF3AP1-201ENST00000413731 RAG1P15918 1043 aa9.89□□□□□ -0.83
UPF3AP1-201ENST00000413731 MFAP1P55081 439 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms