RNA–Protein interactions for RNA: ENST00000413658.6

ZNF3-205, Transcript of zinc finger protein 3, human

TSL 1 (best) BASIC

Gene ZNF3, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-205	ENST00000413658	HAX1	O00165	279 aa		11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	LARGE1	O95461	756 aa		11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	KIF5B	P33176	963 aa		11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	TMEM132B	Q14DG7	1078 aa		11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	SYNE3	Q6ZMZ3	975 aa		11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	TMTC3	Q6ZXV5	915 aa		11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	ADGRF4	Q8IZF3	695 aa		11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	SRBD1	Q8N5C6	995 aa	Known RBP	11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	MB21D1	Q8N884	522 aa		11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	IL27	Q8NEV9	243 aa		11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	CTCFL	Q8NI51	663 aa	Predicted RBP	11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	MTMR8	Q96EF0	704 aa		11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	RANBP17	Q9H2T7	1088 aa	Known RBP	11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	RIOX1	Q9H6W3	641 aa		11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	JMJD4	Q9H9V9	463 aa		11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	NCOA5	Q9HCD5	579 aa	Known RBP	11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	CPA4	Q9UI42	421 aa		11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	ZNF214	Q9UL59	606 aa	Predicted RBP	11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	ISY1	Q9ULR0	285 aa	Known RBP	11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	RABGAP1	Q9Y3P9	1069 aa		11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	CENPF	P49454	3210 aa		11.96	□□□□□ -0.49
ZNF3-205	ENST00000413658	ZNF536	O15090	1300 aa		11.96	□□□□□ -0.5
ZNF3-205	ENST00000413658	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	GOLGA8A	A7E2F4	631 aa		11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	ATP2A1	O14983	1001 aa		11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	PFKFB2	O60825	505 aa		11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	SMARCA1	P28370	1054 aa		11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	ADD1	P35611	737 aa	Known RBP	11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	METAP2	P50579	478 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	SNAP25	P60880	206 aa		11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	ERVK-9	P63128	1117 aa		11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	ERVK-24	P63145	666 aa		11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	CAP1	Q01518	475 aa		11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	PPP2R5B	Q15173	497 aa		11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	NTRK3	Q16288	839 aa		11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	ME3	Q16798	604 aa		11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	RTN1	Q16799	776 aa		11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	FAM110C	Q1W6H9	321 aa		11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658		Q3C1V9	767 aa		11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	NOM1	Q5C9Z4	860 aa	Known RBP	11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	CMTR1	Q8N1G2	835 aa	Known RBP	11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	ANKRD13C	Q8N6S4	541 aa		11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	SPZ1	Q9BXG8	430 aa		11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	TSKS	Q9UJT2	592 aa		11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	LCT	P09848	1927 aa		11.95	□□□□□ -0.5
ZNF3-205	ENST00000413658	FOXN1	O15353	648 aa		11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	FDX1	P10109	184 aa		11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	ST3GAL1	Q11201	340 aa		11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	IK	Q13123	557 aa	Predicted RBP	11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	NOL8	Q76FK4	1167 aa	Known RBP	11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	LZTS2	Q9BRK4	669 aa		11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	PAGR1	Q9BTK6	254 aa		11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	RBM28	Q9NW13	759 aa	Known RBP	11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	LIMCH1	Q9UPQ0	1083 aa		11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	CNTNAP5	Q8WYK1	1306 aa		11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	PLXNA1	Q9UIW2	1896 aa		11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	GPR25	O00155	361 aa		11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	ST18	O60284	1047 aa		11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	PPP1R11	O60927	126 aa	Predicted RBP	11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	ZBED4	O75132	1171 aa		11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	HSPA1A	P0DMV8	641 aa	Known RBP	11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	HSPA1B	P0DMV9	641 aa	Known RBP	11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	CTGF	P29279	349 aa		11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	GNAQ	P50148	359 aa		11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	CCT2	P78371	535 aa	Known RBP	11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	SCRN1	Q12765	414 aa		11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	STK3	Q13188	491 aa		11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	GPRC5A	Q8NFJ5	357 aa		11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	BEGAIN	Q9BUH8	593 aa		11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	SPATC1L	Q9H0A9	340 aa		11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	PORCN	Q9H237	461 aa		11.94	□□□□□ -0.5
ZNF3-205	ENST00000413658	CCDC196	A0A1B0GTZ2	297 aa		11.93	□□□□□ -0.5
ZNF3-205	ENST00000413658	HSPA8	P11142	646 aa	Known RBP	11.93	□□□□□ -0.5
ZNF3-205	ENST00000413658	TAL1	P17542	331 aa	Predicted RBP	11.93	□□□□□ -0.5
ZNF3-205	ENST00000413658	OAZ1	P54368	228 aa		11.93	□□□□□ -0.5
ZNF3-205	ENST00000413658	CDC37	Q16543	378 aa	Predicted RBP	11.93	□□□□□ -0.5
ZNF3-205	ENST00000413658	QRICH1	Q2TAL8	776 aa		11.93	□□□□□ -0.5
ZNF3-205	ENST00000413658	RIOX2	Q8IUF8	465 aa		11.93	□□□□□ -0.5
ZNF3-205	ENST00000413658	NECAB1	Q8N987	351 aa		11.93	□□□□□ -0.5
ZNF3-205	ENST00000413658	GTF3C6	Q969F1	213 aa		11.93	□□□□□ -0.5
ZNF3-205	ENST00000413658	AGBL1	Q96MI9	1066 aa		11.93	□□□□□ -0.5
ZNF3-205	ENST00000413658	PIGS	Q96S52	555 aa		11.93	□□□□□ -0.5
ZNF3-205	ENST00000413658	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.93	□□□□□ -0.5
ZNF3-205	ENST00000413658	SLK	Q9H2G2	1235 aa	Predicted RBP	11.93	□□□□□ -0.5
ZNF3-205	ENST00000413658	RAVER2	Q9HCJ3	691 aa	Known RBP	11.93	□□□□□ -0.5
ZNF3-205	ENST00000413658	VAT1L	Q9HCJ6	419 aa		11.93	□□□□□ -0.5
ZNF3-205	ENST00000413658	RIPK3	Q9Y572	518 aa		11.93	□□□□□ -0.5
ZNF3-205	ENST00000413658	ZNF236	Q9UL36	1845 aa		11.93	□□□□□ -0.5
ZNF3-205	ENST00000413658	ZBTB5	O15062	677 aa		11.92	□□□□□ -0.5
ZNF3-205	ENST00000413658	CTDNEP1	O95476	244 aa		11.92	□□□□□ -0.5
ZNF3-205	ENST00000413658	ICAM1	P05362	532 aa		11.92	□□□□□ -0.5
ZNF3-205	ENST00000413658	IFNAR1	P17181	557 aa		11.92	□□□□□ -0.5
ZNF3-205	ENST00000413658	STAT3	P40763	770 aa		11.92	□□□□□ -0.5
ZNF3-205	ENST00000413658	LACTB	P83111	547 aa	Predicted RBP	11.92	□□□□□ -0.5
ZNF3-205	ENST00000413658	SP3	Q02447	781 aa		11.92	□□□□□ -0.5
ZNF3-205	ENST00000413658	SNRNP48	Q6IEG0	339 aa	Known RBP	11.92	□□□□□ -0.5
ZNF3-205	ENST00000413658	CCDC174	Q6PII3	467 aa		11.92	□□□□□ -0.5
ZNF3-205	ENST00000413658	CPXCR1	Q8N123	301 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms