RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 CHST13Q8NET6 341 aa14.54□□□□□ -0.08
LIMS2-210ENST00000413578 CHMP4BQ9H444 224 aaKnown RBP14.54□□□□□ -0.08
LIMS2-210ENST00000413578 ZNF576Q9H609 170 aa14.54□□□□□ -0.08
LIMS2-210ENST00000413578 FEM1BQ9UK73 627 aa14.54□□□□□ -0.08
LIMS2-210ENST00000413578 ASTN1O14525 1302 aa14.53□□□□□ -0.08
LIMS2-210ENST00000413578 A0A0U1RQG5 324 aaPredicted RBP14.53□□□□□ -0.08
LIMS2-210ENST00000413578 MINDY4BA8MYZ0 360 aa14.53□□□□□ -0.08
LIMS2-210ENST00000413578 RNF113AO15541 343 aaKnown RBP14.53□□□□□ -0.08
LIMS2-210ENST00000413578 GPAA1O43292 621 aa14.53□□□□□ -0.08
LIMS2-210ENST00000413578 PRDM1O75626 825 aa14.53□□□□□ -0.08
LIMS2-210ENST00000413578 CD4P01730 458 aa14.53□□□□□ -0.08
LIMS2-210ENST00000413578 CSF2RAP15509 400 aa14.53□□□□□ -0.08
LIMS2-210ENST00000413578 PPIGQ13427 754 aaKnown RBP eCLIP14.53□□□□□ -0.08
LIMS2-210ENST00000413578 CCDC144CPQ8IYA2 1237 aa14.53□□□□□ -0.08
LIMS2-210ENST00000413578 STK11IPQ8N1F8 1099 aa14.53□□□□□ -0.08
LIMS2-210ENST00000413578 FAM133AQ8N9E0 248 aa14.53□□□□□ -0.08
LIMS2-210ENST00000413578 SLC43A3Q8NBI5 491 aa14.53□□□□□ -0.08
LIMS2-210ENST00000413578 KIFC2Q96AC6 838 aa14.53□□□□□ -0.08
LIMS2-210ENST00000413578 TIFAQ96CG3 184 aa14.53□□□□□ -0.08
LIMS2-210ENST00000413578 PBX4Q9BYU1 374 aa14.53□□□□□ -0.08
LIMS2-210ENST00000413578 PRDM6Q9NQX0 595 aa14.53□□□□□ -0.08
LIMS2-210ENST00000413578 ZNF536O15090 1300 aa14.52□□□□□ -0.08
LIMS2-210ENST00000413578 M0R2C6 588 aa14.52□□□□□ -0.09
LIMS2-210ENST00000413578 TTLL1O95922 423 aa14.52□□□□□ -0.09
LIMS2-210ENST00000413578 PBX2P40425 430 aa14.52□□□□□ -0.09
LIMS2-210ENST00000413578 CNTN2Q02246 1040 aa14.52□□□□□ -0.09
LIMS2-210ENST00000413578 LRRC47Q8N1G4 583 aaKnown RBP14.52□□□□□ -0.09
LIMS2-210ENST00000413578 ANKRD35Q8N283 1001 aa14.52□□□□□ -0.09
LIMS2-210ENST00000413578 SYMPKQ92797 1274 aaKnown RBP14.52□□□□□ -0.09
LIMS2-210ENST00000413578 CHD9Q3L8U1 2897 aa14.52□□□□□ -0.09
LIMS2-210ENST00000413578 MYH7P12883 1935 aa14.51□□□□□ -0.09
LIMS2-210ENST00000413578 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.51□□□□□ -0.09
LIMS2-210ENST00000413578 GRXCR1A8MXD5 290 aa14.51□□□□□ -0.09
LIMS2-210ENST00000413578 ZFYP08048 801 aaPredicted RBP14.51□□□□□ -0.09
LIMS2-210ENST00000413578 FDX1P10109 184 aa14.51□□□□□ -0.09
LIMS2-210ENST00000413578 GNAT2P19087 354 aa14.51□□□□□ -0.09
LIMS2-210ENST00000413578 TJAP1Q5JTD0 557 aa14.51□□□□□ -0.09
LIMS2-210ENST00000413578 GNASQ5JWF2 1037 aa14.51□□□□□ -0.09
LIMS2-210ENST00000413578 C20orf194Q5TEA3 1177 aa14.51□□□□□ -0.09
LIMS2-210ENST00000413578 NEDD1Q8NHV4 660 aa14.51□□□□□ -0.09
LIMS2-210ENST00000413578 SPC25Q9HBM1 224 aa14.51□□□□□ -0.09
LIMS2-210ENST00000413578 ZNF287Q9HBT7 754 aa14.51□□□□□ -0.09
LIMS2-210ENST00000413578 A1CFQ9NQ94 594 aaKnown RBP14.51□□□□□ -0.09
LIMS2-210ENST00000413578 GNEQ9Y223 722 aaKnown RBP14.51□□□□□ -0.09
LIMS2-210ENST00000413578 SOWAHBA6NEL2 793 aa14.5□□□□□ -0.09
LIMS2-210ENST00000413578 BMP3P12645 472 aa14.5□□□□□ -0.09
LIMS2-210ENST00000413578 SLC4A3P48751 1232 aa14.5□□□□□ -0.09
LIMS2-210ENST00000413578 TDO2P48775 406 aa14.5□□□□□ -0.09
LIMS2-210ENST00000413578 TSHZ3Q63HK5 1081 aa14.5□□□□□ -0.09
LIMS2-210ENST00000413578 SLFN13Q68D06 897 aa14.5□□□□□ -0.09
LIMS2-210ENST00000413578 PSRC1Q6PGN9 363 aaPredicted RBP14.5□□□□□ -0.09
LIMS2-210ENST00000413578 CCDC174Q6PII3 467 aa14.5□□□□□ -0.09
LIMS2-210ENST00000413578 ZNF365Q70YC5 407 aa14.5□□□□□ -0.09
LIMS2-210ENST00000413578 IFNL3Q8IZI9 196 aa14.5□□□□□ -0.09
LIMS2-210ENST00000413578 ZNF444Q8N0Y2 327 aaPredicted RBP14.5□□□□□ -0.09
LIMS2-210ENST00000413578 TMEM199Q8N511 208 aa14.5□□□□□ -0.09
LIMS2-210ENST00000413578 HERVK_113Q902F9 699 aa14.5□□□□□ -0.09
LIMS2-210ENST00000413578 GMCL1Q96IK5 515 aa14.5□□□□□ -0.09
LIMS2-210ENST00000413578 DCTPP1Q9H773 170 aa14.5□□□□□ -0.09
LIMS2-210ENST00000413578 ACAD9Q9H845 621 aa14.5□□□□□ -0.09
LIMS2-210ENST00000413578 GRIN2DO15399 1336 aa14.49□□□□□ -0.09
LIMS2-210ENST00000413578 PATL2C9JE40 543 aaKnown RBP14.49□□□□□ -0.09
LIMS2-210ENST00000413578 TMEM232C9JQI7 657 aa14.49□□□□□ -0.09
LIMS2-210ENST00000413578 PLA2G6O60733 806 aa14.49□□□□□ -0.09
LIMS2-210ENST00000413578 STAT2P52630 851 aa14.49□□□□□ -0.09
LIMS2-210ENST00000413578 BEX3Q00994 111 aa14.49□□□□□ -0.09
LIMS2-210ENST00000413578 ADGRE1Q14246 886 aa14.49□□□□□ -0.09
LIMS2-210ENST00000413578 AKNAD1Q5T1N1 836 aa14.49□□□□□ -0.09
LIMS2-210ENST00000413578 PPP1R12CQ9BZL4 782 aa14.49□□□□□ -0.09
LIMS2-210ENST00000413578 IL23AQ9NPF7 189 aa14.49□□□□□ -0.09
LIMS2-210ENST00000413578 CTDP1Q9Y5B0 961 aaPredicted RBP14.49□□□□□ -0.09
LIMS2-210ENST00000413578 FOXP2O15409 715 aa14.48□□□□□ -0.09
LIMS2-210ENST00000413578 CABYRO75952 493 aa14.48□□□□□ -0.09
LIMS2-210ENST00000413578 ACRP10323 421 aa14.48□□□□□ -0.09
LIMS2-210ENST00000413578 PTGS1P23219 599 aa14.48□□□□□ -0.09
LIMS2-210ENST00000413578 CYP2C18P33260 490 aa14.48□□□□□ -0.09
LIMS2-210ENST00000413578 TNFAIP2Q03169 654 aa14.48□□□□□ -0.09
LIMS2-210ENST00000413578 TKFCQ3LXA3 575 aa14.48□□□□□ -0.09
LIMS2-210ENST00000413578 CXCL17Q6UXB2 119 aa14.48□□□□□ -0.09
LIMS2-210ENST00000413578 VWCEQ96DN2 955 aa14.48□□□□□ -0.09
LIMS2-210ENST00000413578 AGBL1Q96MI9 1066 aa14.48□□□□□ -0.09
LIMS2-210ENST00000413578 HOMER2Q9NSB8 354 aa14.48□□□□□ -0.09
LIMS2-210ENST00000413578 RNF146Q9NTX7 359 aa14.48□□□□□ -0.09
LIMS2-210ENST00000413578 CXXC1Q9P0U4 656 aaPredicted RBP14.48□□□□□ -0.09
LIMS2-210ENST00000413578 RCAN3Q9UKA8 241 aa14.48□□□□□ -0.09
LIMS2-210ENST00000413578 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.48□□□□□ -0.09
LIMS2-210ENST00000413578 UMODL1Q5DID0 1318 aa14.47□□□□□ -0.09
LIMS2-210ENST00000413578 ASB14A6NK59 587 aa14.47□□□□□ -0.09
LIMS2-210ENST00000413578 TLR3O15455 904 aaKnown RBP14.47□□□□□ -0.09
LIMS2-210ENST00000413578 TSPY3P0CV98 308 aa14.47□□□□□ -0.09
LIMS2-210ENST00000413578 TSPY8P0CW00 308 aa14.47□□□□□ -0.09
LIMS2-210ENST00000413578 SMPD1P17405 629 aa14.47□□□□□ -0.09
LIMS2-210ENST00000413578 PPARAQ07869 468 aa14.47□□□□□ -0.09
LIMS2-210ENST00000413578 TAPT1Q6NXT6 567 aa14.47□□□□□ -0.09
LIMS2-210ENST00000413578 TLK2Q86UE8 772 aa14.47□□□□□ -0.09
LIMS2-210ENST00000413578 FAM160B2Q86V87 743 aa14.47□□□□□ -0.09
LIMS2-210ENST00000413578 MORC4Q8TE76 937 aa14.47□□□□□ -0.09
LIMS2-210ENST00000413578 STAG1Q8WVM7 1258 aa14.47□□□□□ -0.09
LIMS2-210ENST00000413578 VTI1AQ96AJ9 217 aa14.47□□□□□ -0.09
LIMS2-210ENST00000413578 SEC62Q99442 399 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms