RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 CCNI2Q6ZMN8 369 aaPredicted RBP9.98□□□□□ -0.81
SIK3-202ENST00000413553 IFNL3Q8IZI9 196 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 NYXQ9GZU5 481 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 RWDD2AQ9UIY3 292 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 CCDC196A0A1B0GTZ2 297 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 PRDM1O75626 825 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 MBD4O95243 580 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 USP8P40818 1118 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 UBE3CQ15386 1083 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 IQCEQ6IPM2 695 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 EHBP1Q8NDI1 1231 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 HELBQ8NG08 1087 aaPredicted RBP9.98□□□□□ -0.81
SIK3-202ENST00000413553 KRT23Q9C075 422 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 CNNM2Q9H8M5 875 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 NHSQ6T4R5 1651 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 XDHP47989 1333 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 KRT2P35908 639 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 MATR3P43243 847 aaKnown RBP eCLIP9.98□□□□□ -0.812e-6■■■□□ 17.5
SIK3-202ENST00000413553 TDO2P48775 406 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 KRT83P78385 493 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 MRPS25P82663 173 aaKnown RBP9.98□□□□□ -0.81
SIK3-202ENST00000413553 TXNRD1Q16881 649 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 EARS2Q5JPH6 523 aaKnown RBP9.98□□□□□ -0.81
SIK3-202ENST00000413553 AKNAD1Q5T1N1 836 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 PAPD7Q5XG87 772 aaKnown RBP9.98□□□□□ -0.81
SIK3-202ENST00000413553 AMIGO3Q86WK7 504 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 POTEDQ86YR6 584 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 ANKRD18AQ8IVF6 992 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 RRP36Q96EU6 259 aaKnown RBP9.98□□□□□ -0.81
SIK3-202ENST00000413553 NLRP3Q96P20 1036 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 STRBPQ96SI9 672 aaKnown RBP9.98□□□□□ -0.81
SIK3-202ENST00000413553 ARMT1Q9H993 441 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 EPB41L4AQ9HCS5 686 aaPredicted RBP9.98□□□□□ -0.81
SIK3-202ENST00000413553 TFCP2L1Q9NZI6 479 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 FAM184BQ9ULE4 1060 aa9.98□□□□□ -0.81
SIK3-202ENST00000413553 EIF3HO15372 352 aaKnown RBP eCLIP9.97□□□□□ -0.81
SIK3-202ENST00000413553 HNRNPH1P31943 449 aaKnown RBP9.97□□□□□ -0.81
SIK3-202ENST00000413553 ZNF654Q8IZM8 581 aa9.97□□□□□ -0.81
SIK3-202ENST00000413553 FERMT2Q96AC1 680 aa9.97□□□□□ -0.81
SIK3-202ENST00000413553 CEP89Q96ST8 783 aa9.97□□□□□ -0.81
SIK3-202ENST00000413553 GDAQ9Y2T3 454 aa9.97□□□□□ -0.81
SIK3-202ENST00000413553 MYH10P35580 1976 aa9.97□□□□□ -0.81
SIK3-202ENST00000413553 TRIM49BA6NDI0 452 aa9.97□□□□□ -0.81
SIK3-202ENST00000413553 PDE2AO00408 941 aaPredicted RBP9.97□□□□□ -0.81
SIK3-202ENST00000413553 WNT7AO00755 349 aa9.97□□□□□ -0.81
SIK3-202ENST00000413553 CYLC1P35663 651 aaPredicted RBP9.97□□□□□ -0.81
SIK3-202ENST00000413553 SETQ01105 290 aaPredicted RBP9.97□□□□□ -0.81
SIK3-202ENST00000413553 FKBP15Q5T1M5 1219 aa9.97□□□□□ -0.81
SIK3-202ENST00000413553 FANCBQ8NB91 859 aa9.97□□□□□ -0.81
SIK3-202ENST00000413553 PCMTD1Q96MG8 357 aaPredicted RBP9.97□□□□□ -0.81
SIK3-202ENST00000413553 CAPN7Q9Y6W3 813 aa9.97□□□□□ -0.81
SIK3-202ENST00000413553 LRRC10BA6NIK2 292 aa9.96□□□□□ -0.81
SIK3-202ENST00000413553 PATL2C9JE40 543 aaKnown RBP9.96□□□□□ -0.81
SIK3-202ENST00000413553 NDUFAB1O14561 156 aa9.96□□□□□ -0.81
SIK3-202ENST00000413553 KIAA0754O94854 1291 aa9.96□□□□□ -0.81
SIK3-202ENST00000413553 PARP1P09874 1014 aaKnown RBP9.96□□□□□ -0.81
SIK3-202ENST00000413553 SWT1Q5T5J6 900 aaKnown RBP9.96□□□□□ -0.81
SIK3-202ENST00000413553 MAGEB6Q8N7X4 407 aa9.96□□□□□ -0.81
SIK3-202ENST00000413553 UBAC1Q9BSL1 405 aa9.96□□□□□ -0.81
SIK3-202ENST00000413553 LACRTQ9GZZ8 138 aa9.96□□□□□ -0.81
SIK3-202ENST00000413553 RIPOR2Q9Y4F9 1068 aa9.96□□□□□ -0.81
SIK3-202ENST00000413553 TACC3Q9Y6A5 838 aa9.96□□□□□ -0.81
SIK3-202ENST00000413553 RIC1Q4ADV7 1423 aa9.96□□□□□ -0.81
SIK3-202ENST00000413553 GOLGA8KD6RF30 607 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 PDE8BO95263 885 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 TRIM21P19474 475 aaKnown RBP9.96□□□□□ -0.82
SIK3-202ENST00000413553 MAP2K2P36507 400 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 PHKA1P46020 1223 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 PPARAQ07869 468 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 PTGDRQ13258 359 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 EZH2Q15910 746 aaKnown RBP9.96□□□□□ -0.82
SIK3-202ENST00000413553 GBP6Q6ZN66 633 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 MB21D1Q8N884 522 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 ZNHIT6Q9NWK9 470 aaKnown RBP9.96□□□□□ -0.82
SIK3-202ENST00000413553 DUSP10Q9Y6W6 482 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 GRIN2DO15399 1336 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 ANKRD36CQ5JPF3 1778 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 OPA1O60313 960 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 HMGB2P26583 209 aaKnown RBP9.96□□□□□ -0.82
SIK3-202ENST00000413553 SLC7A5Q01650 507 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 CYP27A1Q02318 531 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 PDCLQ13371 301 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 TTC38Q5R3I4 469 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 ZNF658Q5TYW1 1059 aaPredicted RBP9.96□□□□□ -0.82
SIK3-202ENST00000413553 KCNV1Q6PIU1 500 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 WDR59Q6PJI9 974 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 AMOTL1Q8IY63 956 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 AENQ8WTP8 325 aaKnown RBP9.96□□□□□ -0.82
SIK3-202ENST00000413553 PSMB7Q99436 277 aa9.96□□□□□ -0.82
SIK3-202ENST00000413553 MAGEC2Q9UBF1 373 aaPredicted RBP9.96□□□□□ -0.82
SIK3-202ENST00000413553 RCCD1A6NED2 376 aa9.95□□□□□ -0.82
SIK3-202ENST00000413553 PRKAB2O43741 272 aa9.95□□□□□ -0.82
SIK3-202ENST00000413553 ZEB2O60315 1214 aa9.95□□□□□ -0.82
SIK3-202ENST00000413553 BMP15O95972 392 aa9.95□□□□□ -0.82
SIK3-202ENST00000413553 ADRA2BP18089 450 aa9.95□□□□□ -0.82
SIK3-202ENST00000413553 PRCPP42785 496 aa9.95□□□□□ -0.82
SIK3-202ENST00000413553 ATP1A2P50993 1020 aa9.95□□□□□ -0.82
SIK3-202ENST00000413553 HDAC7Q8WUI4 952 aa9.95□□□□□ -0.82
SIK3-202ENST00000413553 SECISBP2LQ93073 1101 aaKnown RBP9.95□□□□□ -0.82
SIK3-202ENST00000413553 TRIM47Q96LD4 638 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 172.2 ms