RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 AKNAD1Q5T1N1 836 aa10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 RCSD1Q6JBY9 416 aa10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 MB21D1Q8N884 522 aa10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 GMCL1P1Q8NEA9 526 aa10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 SHCBP1Q8NEM2 672 aa10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 U2AF1L4Q8WU68 220 aaKnown RBP10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 STAG1Q8WVM7 1258 aa10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 SLF1Q9BQI6 1058 aa10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 DNAH12Q6ZR08 3092 aa10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 LRRC37A2A6NM11 1700 aa10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 TRIOBPQ9H2D6 2365 aa10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 C2orf72A6NCS6 295 aa10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 COBLO75128 1261 aa10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 HOXC6P09630 235 aa10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 ADORA2AP29274 412 aa10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 CCND3P30281 292 aaPredicted RBP10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 RGS2P41220 211 aa10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 PTH1RQ03431 593 aa10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 CACNB2Q08289 660 aaPredicted RBP10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 SLFN13Q68D06 897 aa10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 RIOX2Q8IUF8 465 aa10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 CCAR1Q8IX12 1150 aaKnown RBP10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 DEFB118Q96PH6 123 aa10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 DSCC1Q9BVC3 393 aa10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 SYNPO2Q9UMS6 1093 aa10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 STX8Q9UNK0 236 aa10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 RIPK3Q9Y572 518 aa10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 TAF6LQ9Y6J9 622 aa10.1□□□□□ -0.79
HERPUD2-203ENST00000413517 HIP1O00291 1037 aa10.09□□□□□ -0.79
HERPUD2-203ENST00000413517 SGPL1O95470 568 aa10.09□□□□□ -0.79
HERPUD2-203ENST00000413517 BMP3P12645 472 aa10.09□□□□□ -0.79
HERPUD2-203ENST00000413517 ZKSCAN1P17029 563 aaPredicted RBP10.09□□□□□ -0.79
HERPUD2-203ENST00000413517 TAL1P17542 331 aaPredicted RBP10.09□□□□□ -0.79
HERPUD2-203ENST00000413517 MCCP23508 829 aa10.09□□□□□ -0.79
HERPUD2-203ENST00000413517 PDE4CQ08493 712 aa10.09□□□□□ -0.79
HERPUD2-203ENST00000413517 KCTD1Q719H9 257 aa10.09□□□□□ -0.79
HERPUD2-203ENST00000413517 NCAPG2Q86XI2 1143 aa10.09□□□□□ -0.79
HERPUD2-203ENST00000413517 BANK1Q8NDB2 785 aa10.09□□□□□ -0.79
HERPUD2-203ENST00000413517 TRPV1Q8NER1 839 aa10.09□□□□□ -0.79
HERPUD2-203ENST00000413517 DIS3LQ8TF46 1054 aaKnown RBP10.09□□□□□ -0.79
HERPUD2-203ENST00000413517 TMEM47Q9BQJ4 181 aa10.09□□□□□ -0.79
HERPUD2-203ENST00000413517 TOMM22Q9NS69 142 aa10.09□□□□□ -0.79
HERPUD2-203ENST00000413517 IVNS1ABPQ9Y6Y0 642 aa10.09□□□□□ -0.79
HERPUD2-203ENST00000413517 RPTORQ8N122 1335 aa10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 RAD50Q92878 1312 aa10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 B4E1Z4 1266 aa10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 TMEM232C9JQI7 657 aa10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 SGSM2O43147 1006 aa10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 CYP2C19P33261 490 aa10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 STAT3P40763 770 aa10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 SNAP25P60880 206 aa10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 SNRNP48Q6IEG0 339 aaKnown RBP10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 TTBK2Q6IQ55 1244 aa10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 MFSD6Q6ZSS7 791 aa10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 CPXCR1Q8N123 301 aa10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 PRPF38AQ8NAV1 312 aaKnown RBP10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 KIFC2Q96AC6 838 aa10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 MS4A3Q96HJ5 214 aa10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 GMCL1Q96IK5 515 aa10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 ZKSCAN3Q9BRR0 538 aa10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 MROH8Q9H579 483 aa10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 SLC38A10Q9HBR0 1119 aa10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 CWC22Q9HCG8 908 aaKnown RBP10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 RAVER2Q9HCJ3 691 aaKnown RBP10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 HMX1Q9NP08 348 aaPredicted RBP10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 TCP11L1Q9NUJ3 509 aa10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 POLR3EQ9NVU0 708 aa10.08□□□□□ -0.8
HERPUD2-203ENST00000413517 ZNF536O15090 1300 aa10.07□□□□□ -0.8
HERPUD2-203ENST00000413517 ZNF213O14771 459 aa10.07□□□□□ -0.8
HERPUD2-203ENST00000413517 ATP2A1O14983 1001 aa10.07□□□□□ -0.8
HERPUD2-203ENST00000413517 STRNO43815 780 aa10.07□□□□□ -0.8
HERPUD2-203ENST00000413517 KDM4AO75164 1064 aa10.07□□□□□ -0.8
HERPUD2-203ENST00000413517 FARP2O94887 1054 aaPredicted RBP10.07□□□□□ -0.8
HERPUD2-203ENST00000413517 PGK2P07205 417 aa10.07□□□□□ -0.8
HERPUD2-203ENST00000413517 CYBAP13498 195 aa10.07□□□□□ -0.8
HERPUD2-203ENST00000413517 TIE1P35590 1138 aa10.07□□□□□ -0.8
HERPUD2-203ENST00000413517 LHX8Q68G74 356 aa10.07□□□□□ -0.8
HERPUD2-203ENST00000413517 CENPQQ7L2Z9 268 aaPredicted RBP10.07□□□□□ -0.8
HERPUD2-203ENST00000413517 FGD4Q96M96 766 aa10.07□□□□□ -0.8
HERPUD2-203ENST00000413517 TEX13BQ9BXU2 312 aa10.07□□□□□ -0.8
HERPUD2-203ENST00000413517 FEM1BQ9UK73 627 aa10.07□□□□□ -0.8
HERPUD2-203ENST00000413517 PLA2G6O60733 806 aa10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 SLC25A27O95847 323 aa10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 CYP21A2P08686 494 aa10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 TOP1P11387 765 aaKnown RBP10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 PCP11498 1178 aaKnown RBP10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 FCER1AP12319 257 aa10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 CD44P16070 742 aaKnown RBP10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 SLC16A2P36021 539 aa10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 SLC1A4P43007 532 aa10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 STAT2P52630 851 aa10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 COL9A3Q14050 684 aaPredicted RBP10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 ZNF792Q3KQV3 632 aa10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 OLFML2BQ68BL8 750 aa10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 STOX1Q6ZVD7 989 aa10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 CYB5R4Q7L1T6 521 aa10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 TRMT44Q8IYL2 757 aaKnown RBP10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 ABRAQ8N0Z2 381 aa10.06□□□□□ -0.8
HERPUD2-203ENST00000413517 MAML3Q96JK9 1138 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms