RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 NCAPH2Q6IBW4 605 aa21.33■■□□□ 1
TNFRSF8-202ENST00000413146 SMARCC1Q92922 1105 aaPredicted RBP21.33■■□□□ 1
TNFRSF8-202ENST00000413146 TRIM10Q9UDY6 481 aa21.33■■□□□ 1
TNFRSF8-202ENST00000413146 CAPN11Q9UMQ6 739 aa21.33■■□□□ 1
TNFRSF8-202ENST00000413146 SPATA31A1Q5TZJ5 1347 aa21.32■■□□□ 1
TNFRSF8-202ENST00000413146 UBAP1LF5GYI3 381 aa21.32■■□□□ 1
TNFRSF8-202ENST00000413146 M0R2N6 131 aa21.32■■□□□ 1
TNFRSF8-202ENST00000413146 RHOBTB3O94955 611 aa21.32■■□□□ 1
TNFRSF8-202ENST00000413146 RPS8P62241 208 aaKnown RBP21.32■■□□□ 1
TNFRSF8-202ENST00000413146 SEMA3FQ13275 785 aa21.32■■□□□ 1
TNFRSF8-202ENST00000413146 GRM4Q14833 912 aa21.32■■□□□ 1
TNFRSF8-202ENST00000413146 ZNF507Q8TCN5 953 aa21.32■■□□□ 1
TNFRSF8-202ENST00000413146 NOC3LQ8WTT2 800 aaKnown RBP21.32■■□□□ 1
TNFRSF8-202ENST00000413146 CCSER1Q9C0I3 900 aa21.32■■□□□ 1
TNFRSF8-202ENST00000413146 TMEM60Q9H2L4 133 aa21.32■■□□□ 1
TNFRSF8-202ENST00000413146 PSD3Q9NYI0 1048 aa21.32■■□□□ 1
TNFRSF8-202ENST00000413146 PCDHA6Q9UN73 950 aa21.32■■□□□ 1
TNFRSF8-202ENST00000413146 THRAP3Q9Y2W1 955 aaKnown RBP21.32■■□□□ 1
TNFRSF8-202ENST00000413146 PCDHA8Q9Y5H6 950 aa21.32■■□□□ 1
TNFRSF8-202ENST00000413146 KLRC4O43908 158 aa21.32■■□□□ 1
TNFRSF8-202ENST00000413146 DNM2P50570 870 aa21.32■■□□□ 1
TNFRSF8-202ENST00000413146 INF2Q27J81 1249 aa21.32■■□□□ 1
TNFRSF8-202ENST00000413146 TYW1BQ6NUM6 668 aa21.32■■□□□ 1
TNFRSF8-202ENST00000413146 NOA1Q8NC60 698 aaKnown RBP21.32■■□□□ 1
TNFRSF8-202ENST00000413146 PLIN2Q99541 437 aa21.32■■□□□ 1
TNFRSF8-202ENST00000413146 ANKRD2Q9GZV1 360 aa21.32■■□□□ 1
TNFRSF8-202ENST00000413146 IL17RBQ9NRM6 502 aa21.32■■□□□ 1
TNFRSF8-202ENST00000413146 PSMD14O00487 310 aa21.31■■□□□ 1
TNFRSF8-202ENST00000413146 LAD1O00515 517 aa21.31■■□□□ 1
TNFRSF8-202ENST00000413146 NT5C2P49902 561 aa21.31■■□□□ 1
TNFRSF8-202ENST00000413146 GALNT17Q6IS24 598 aa21.31■■□□□ 1
TNFRSF8-202ENST00000413146 HEATR3Q7Z4Q2 680 aa21.31■■□□□ 1
TNFRSF8-202ENST00000413146 DAGLBQ8NCG7 672 aa21.31■■□□□ 1
TNFRSF8-202ENST00000413146 GIMAP8Q8ND71 665 aaPredicted RBP21.31■■□□□ 1
TNFRSF8-202ENST00000413146 SUGCTQ9HAC7 445 aa21.31■■□□□ 1
TNFRSF8-202ENST00000413146 KBTBD4Q9NVX7 518 aa21.31■■□□□ 1
TNFRSF8-202ENST00000413146 VPS18Q9P253 973 aa21.31■■□□□ 1
TNFRSF8-202ENST00000413146 LMAN1P49257 510 aa21.31■■□□□ 1
TNFRSF8-202ENST00000413146 CCDC122Q5T0U0 273 aa21.31■■□□□ 1
TNFRSF8-202ENST00000413146 TRAPPC11Q7Z392 1133 aa21.31■■□□□ 1
TNFRSF8-202ENST00000413146 PODXL2Q9NZ53 605 aa21.31■■□□□ 1
TNFRSF8-202ENST00000413146 KRT83P78385 493 aa21.3■■□□□ 1
TNFRSF8-202ENST00000413146 MUM1L1Q5H9M0 696 aa21.3■■□□□ 1
TNFRSF8-202ENST00000413146 SLC10A5Q5PT55 438 aa21.3■■□□□ 1
TNFRSF8-202ENST00000413146 C12orf60Q5U649 245 aa21.3■■□□□ 1
TNFRSF8-202ENST00000413146 SPTY2D1Q68D10 685 aaPredicted RBP21.3■■□□□ 1
TNFRSF8-202ENST00000413146 CCDC47Q96A33 483 aaKnown RBP21.3■■□□□ 1
TNFRSF8-202ENST00000413146 MKNK2Q9HBH9 465 aa21.3■■□□□ 1
TNFRSF8-202ENST00000413146 MAD2L2Q9UI95 211 aa21.3■■□□□ 1
TNFRSF8-202ENST00000413146 JAG2Q9Y219 1238 aa21.3■■□□□ 1
TNFRSF8-202ENST00000413146 B4DLN1 442 aa21.3■■□□□ 1
TNFRSF8-202ENST00000413146 HERVK_113P62684 666 aa21.3■■□□□ 1
TNFRSF8-202ENST00000413146 CASP8Q14790 479 aa21.3■■□□□ 1
TNFRSF8-202ENST00000413146 CCDC178Q5BJE1 867 aa21.3■■□□□ 1
TNFRSF8-202ENST00000413146 TTI2Q6NXR4 508 aa21.3■■□□□ 1
TNFRSF8-202ENST00000413146 KIAA1328Q86T90 577 aa21.3■■□□□ 1
TNFRSF8-202ENST00000413146 CSGALNACT2Q8N6G5 542 aa21.3■■□□□ 1
TNFRSF8-202ENST00000413146 EHBP1Q8NDI1 1231 aa21.3■■□□□ 1
TNFRSF8-202ENST00000413146 ANKS1AQ92625 1134 aa21.3■■□□□ 1
TNFRSF8-202ENST00000413146 DHTKD1Q96HY7 919 aaPredicted RBP21.3■■□□□ 1
TNFRSF8-202ENST00000413146 EXOC1Q9NV70 894 aa21.3■■□□□ 1
TNFRSF8-202ENST00000413146 PRPHP41219 470 aa21.29■■□□□ 1
TNFRSF8-202ENST00000413146 WDR93Q6P2C0 686 aa21.29■■□□□ 1
TNFRSF8-202ENST00000413146 WDR59Q6PJI9 974 aa21.29■■□□□ 1
TNFRSF8-202ENST00000413146 TUBGCP2Q9BSJ2 902 aa21.29■■□□□ 1
TNFRSF8-202ENST00000413146 ACBD3Q9H3P7 528 aa21.29■■□□□ 1
TNFRSF8-202ENST00000413146 CUEDC2Q9H467 287 aa21.29■■□□□ 1
TNFRSF8-202ENST00000413146 MAGEF1Q9HAY2 307 aa21.29■■□□□ 1
TNFRSF8-202ENST00000413146 ZNHIT6Q9NWK9 470 aaKnown RBP21.29■■□□□ 1
TNFRSF8-202ENST00000413146 BARHL2Q9NY43 387 aa21.29■■□□□ 1
TNFRSF8-202ENST00000413146 ENC1O14682 589 aa21.29■■□□□ 1
TNFRSF8-202ENST00000413146 TSPY3P0CV98 308 aa21.29■■□□□ 1
TNFRSF8-202ENST00000413146 TSPY8P0CW00 308 aa21.29■■□□□ 1
TNFRSF8-202ENST00000413146 SRGNP10124 158 aa21.29■■□□□ 1
TNFRSF8-202ENST00000413146 TRIM21P19474 475 aaKnown RBP21.29■■□□□ 1
TNFRSF8-202ENST00000413146 CYLC1P35663 651 aaPredicted RBP21.29■■□□□ 1
TNFRSF8-202ENST00000413146 TBC1D9BQ66K14 1250 aa21.29■■□□□ 1
TNFRSF8-202ENST00000413146 AMOTL1Q8IY63 956 aa21.29■■□□□ 1
TNFRSF8-202ENST00000413146 DYNLL2Q96FJ2 89 aa21.29■■□□□ 1
TNFRSF8-202ENST00000413146 NLRP3Q96P20 1036 aa21.29■■□□□ 1
TNFRSF8-202ENST00000413146 NUP58Q9BVL2 599 aa21.29■■□□□ 1
TNFRSF8-202ENST00000413146 MTMR7Q9Y216 660 aa21.29■■□□□ 1
TNFRSF8-202ENST00000413146 BICDL2A1A5D9 508 aa21.28■■□□□ 1
TNFRSF8-202ENST00000413146 STXBP3O00186 592 aa21.28■■□□□ 1
TNFRSF8-202ENST00000413146 KRT86O43790 486 aa21.28■■□□□ 1
TNFRSF8-202ENST00000413146 IPO7O95373 1038 aaKnown RBP21.28■■□□□ 1
TNFRSF8-202ENST00000413146 MEA1Q16626 185 aa21.28■■□□□ 1
TNFRSF8-202ENST00000413146 ZSCAN26Q16670 478 aa21.28■■□□□ 1
TNFRSF8-202ENST00000413146 HSP90B2PQ58FF3 399 aa21.28■■□□□ 1
TNFRSF8-202ENST00000413146 LINC00116Q8NCU8 138 aa21.28■■□□□ 1
TNFRSF8-202ENST00000413146 NYXQ9GZU5 481 aa21.28■■□□□ 1
TNFRSF8-202ENST00000413146 TCP11L1Q9NUJ3 509 aa21.28■■□□□ 1
TNFRSF8-202ENST00000413146 SAR1BQ9Y6B6 198 aa21.28■■□□□ 1
TNFRSF8-202ENST00000413146 CABP7Q86V35 215 aa21.28■■□□□ 1
TNFRSF8-202ENST00000413146 JAKMIP2Q96AA8 810 aa21.28■■□□□ 1
TNFRSF8-202ENST00000413146 HDAC6Q9UBN7 1215 aa21.28■■□□□ 1
TNFRSF8-202ENST00000413146 USP17L3A6NCW0 530 aa21.27■■□□□ 1
TNFRSF8-202ENST00000413146 USP17L4A6NCW7 530 aa21.27■■□□□ 1
TNFRSF8-202ENST00000413146 ATP1A1P05023 1023 aaKnown RBP21.27■■□□□ 1
TNFRSF8-202ENST00000413146 USP17L1Q7RTZ2 530 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms