RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 SF3B6Q9Y3B4 125 aaKnown RBP6.04□□□□□ -1.44
BRCA1-204ENST00000412061 FAM155AB1AL88 458 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-204ENST00000412061 DYRK3O43781 588 aa6.03□□□□□ -1.44
BRCA1-204ENST00000412061 ASMTLO95671 621 aa6.03□□□□□ -1.44
BRCA1-204ENST00000412061 IGLV1-40P01703 118 aa6.03□□□□□ -1.44
BRCA1-204ENST00000412061 H2AFB1P0C5Y9 115 aa6.03□□□□□ -1.44
BRCA1-204ENST00000412061 H2AFB2P0C5Z0 115 aa6.03□□□□□ -1.44
BRCA1-204ENST00000412061 TNK2Q07912 1038 aa6.03□□□□□ -1.44
BRCA1-204ENST00000412061 GRB10Q13322 594 aa6.03□□□□□ -1.44
BRCA1-204ENST00000412061 PPP2R5DQ14738 602 aa6.03□□□□□ -1.44
BRCA1-204ENST00000412061 CPSF6Q16630 551 aaKnown RBP eCLIP6.03□□□□□ -1.44
BRCA1-204ENST00000412061 CLEC16AQ2KHT3 1053 aa6.03□□□□□ -1.44
BRCA1-204ENST00000412061 FERMT3Q86UX7 667 aa6.03□□□□□ -1.44
BRCA1-204ENST00000412061 ENOX1Q8TC92 643 aaKnown RBP6.03□□□□□ -1.44
BRCA1-204ENST00000412061 IER2Q9BTL4 223 aa6.03□□□□□ -1.44
BRCA1-204ENST00000412061 LGR4Q9BXB1 951 aa6.03□□□□□ -1.44
BRCA1-204ENST00000412061 OSBPL1AQ9BXW6 950 aa6.03□□□□□ -1.44
BRCA1-204ENST00000412061 TRBV23-1A0A0A0MS06 115 aa6.02□□□□□ -1.45
BRCA1-204ENST00000412061 WDR64B1ANS9 1081 aa6.02□□□□□ -1.45
BRCA1-204ENST00000412061 KCNH1O95259 989 aa6.02□□□□□ -1.45
BRCA1-204ENST00000412061 PRAMEF1O95521 474 aa6.02□□□□□ -1.45
BRCA1-204ENST00000412061 FGFR1P11362 822 aa6.02□□□□□ -1.45
BRCA1-204ENST00000412061 FSTP19883 344 aa6.02□□□□□ -1.45
BRCA1-204ENST00000412061 LCE3BQ5TA77 95 aa6.02□□□□□ -1.45
BRCA1-204ENST00000412061 SCUBE1Q8IWY4 988 aa6.02□□□□□ -1.45
BRCA1-204ENST00000412061 SHKBP1Q8TBC3 707 aa6.02□□□□□ -1.45
BRCA1-204ENST00000412061 ZDHHC15Q96MV8 337 aa6.02□□□□□ -1.45
BRCA1-204ENST00000412061 CEP89Q96ST8 783 aa6.02□□□□□ -1.45
BRCA1-204ENST00000412061 DHRS4Q9BTZ2 278 aa6.02□□□□□ -1.45
BRCA1-204ENST00000412061 GPR62Q9BZJ7 368 aa6.02□□□□□ -1.45
BRCA1-204ENST00000412061 TRIT1Q9H3H1 467 aaKnown RBP6.02□□□□□ -1.45
BRCA1-204ENST00000412061 MKNK2Q9HBH9 465 aa6.02□□□□□ -1.45
BRCA1-204ENST00000412061 RBAK-RBAKDNI3L0D1 243 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 PRODHO43272 600 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 TBX1O43435 398 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 PRC1O43663 620 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 GSNP06396 782 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 OXCT1P55809 520 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 TBX4P57082 545 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 AMPD2Q01433 879 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 TKFCQ3LXA3 575 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 FAM209AQ5JX71 171 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 YOD1Q5VVQ6 348 aaPredicted RBP6.01□□□□□ -1.45
BRCA1-204ENST00000412061 FOXB2Q5VYV0 432 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 CWF19L1Q69YN2 538 aaKnown RBP6.01□□□□□ -1.45
BRCA1-204ENST00000412061 GTF2IRD2BQ6EKJ0 949 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 NSMFQ6X4W1 530 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 GTF2IRD2Q86UP8 949 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 DAGLBQ8NCG7 672 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 BTN2A2Q8WVV5 523 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 KISS1RQ969F8 398 aaPredicted RBP6.01□□□□□ -1.45
BRCA1-204ENST00000412061 EXOC2Q96KP1 924 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 HDAC8Q9BY41 377 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 HOMER2Q9NSB8 354 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 GPATCH2Q9NW75 528 aa6.01□□□□□ -1.45
BRCA1-204ENST00000412061 MRPS23Q9Y3D9 190 aaKnown RBP6.01□□□□□ -1.45
BRCA1-204ENST00000412061 SHISA3A0PJX4 238 aa6□□□□□ -1.45
BRCA1-204ENST00000412061 H0Y8X5 98 aa6□□□□□ -1.45
BRCA1-204ENST00000412061 MEIS1O00470 390 aa6□□□□□ -1.45
BRCA1-204ENST00000412061 CAPNS1P04632 268 aa6□□□□□ -1.45
BRCA1-204ENST00000412061 SRFP11831 508 aa6□□□□□ -1.45
BRCA1-204ENST00000412061 PABPC1P11940 636 aaKnown RBP6□□□□□ -1.45
BRCA1-204ENST00000412061 ITIH2P19823 946 aa6□□□□□ -1.45
BRCA1-204ENST00000412061 L1CAMP32004 1257 aa6□□□□□ -1.45
BRCA1-204ENST00000412061 GRIA2P42262 883 aa6□□□□□ -1.45
BRCA1-204ENST00000412061 EVA1CP58658 441 aa6□□□□□ -1.45
BRCA1-204ENST00000412061 SUMO1P63165 101 aaKnown RBP6□□□□□ -1.45
BRCA1-204ENST00000412061 POU4F1Q01851 419 aa6□□□□□ -1.45
BRCA1-204ENST00000412061 ARTNQ5T4W7 220 aa6□□□□□ -1.45
BRCA1-204ENST00000412061 SLC51AQ86UW1 340 aa6□□□□□ -1.45
BRCA1-204ENST00000412061 ZNF655Q8N720 491 aaPredicted RBP6□□□□□ -1.45
BRCA1-204ENST00000412061 CCDC140Q96MF4 163 aa6□□□□□ -1.45
BRCA1-204ENST00000412061 NKX2-4Q9H2Z4 354 aa6□□□□□ -1.45
BRCA1-204ENST00000412061 ZFP64Q9NPA5 681 aa6□□□□□ -1.45
BRCA1-204ENST00000412061 DNAJC25-GNG10A0A024R161 153 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 VAMP4O75379 141 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 EIF3JO75822 258 aaKnown RBP5.99□□□□□ -1.45
BRCA1-204ENST00000412061 CEACAM5P06731 702 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 HOXC12P31275 282 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 CLCN7P51798 805 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 NKPD1Q17RQ9 610 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 PRSS36Q5K4E3 855 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 CDKAL1Q5VV42 579 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 FAM181AQ8N9Y4 354 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 KCTD13Q8WZ19 329 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 OSBP2Q969R2 916 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 DUSP15Q9H1R2 295 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-204ENST00000412061 NCOA5Q9HCD5 579 aaKnown RBP5.99□□□□□ -1.45
BRCA1-204ENST00000412061 LRRC4CQ9HCJ2 640 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 CYP26B1Q9NR63 512 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 GEMIN8Q9NWZ8 242 aaKnown RBP5.99□□□□□ -1.45
BRCA1-204ENST00000412061 TCEAL9Q9UHQ7 104 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 MINPP1Q9UNW1 487 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 PLAAQ9Y263 795 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 CD2APQ9Y5K6 639 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 ST14Q9Y5Y6 855 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 PLD2O14939 933 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 CYP26A1O43174 497 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 CPP00450 1065 aa5.99□□□□□ -1.45
BRCA1-204ENST00000412061 SNRPB2P08579 225 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms