RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 PLEKHM2Q8IWE5 1019 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 TTC1Q99614 292 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 SUGT1Q9Y2Z0 365 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 PDE6CP51160 858 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 PHEXP78562 749 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 HADHQ16836 314 aaKnown RBP12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 SPATA5Q8NB90 893 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 DDX25Q9UHL0 483 aaKnown RBP12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 SLC13A4Q9UKG4 626 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 PCDHB4Q9Y5E5 795 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 SOS1Q07889 1333 aaPredicted RBP12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 POLR2MP0CAP2 368 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 RPS6KB1P23443 525 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 ANKRD42Q8N9B4 389 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 SEPT8Q92599 483 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 DBNDD2Q9BQY9 259 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 C1orf112Q9NSG2 853 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 PTPN22Q9Y2R2 807 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 ZFYVE9O95405 1425 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 SPECC1L-ADORA2AF8WAN1 911 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 BAG2O95816 211 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 KLHL40Q2TBA0 621 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 RNF219Q5W0B1 726 aaPredicted RBP12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 CABP7Q86V35 215 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 ANKRD36BP1Q96IX9 119 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 VPS54Q9P1Q0 977 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 ORC6Q9Y5N6 252 aa12.31□□□□□ -0.44
PRPF40A-202ENST00000410080 FAM95CA0A1B0GW59 222 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 LONRF2Q1L5Z9 754 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 FGD4Q96M96 766 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 SH3TC1Q8TE82 1336 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 GNGT2O14610 69 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 EEPD1Q7L9B9 569 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 VSIG1Q86XK7 387 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 ARHGAP24Q8N264 748 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 CSRNP1Q96S65 589 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 NAPGQ99747 312 aaPredicted RBP12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 PIDD1Q9HB75 910 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 FAM8A1Q9UBU6 413 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 FMNL1O95466 1100 aaPredicted RBP12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 PPP1R2P41236 205 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 KLHL30Q0D2K2 578 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 LRWD1Q9UFC0 647 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 KDM3AQ9Y4C1 1321 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 SGK1O00141 431 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 XAB2Q9HCS7 855 aaKnown RBP12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 PANK4Q9NVE7 773 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 SMCO2A6NFE2 343 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 RAB44Q7Z6P3 723 aaPredicted RBP12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 AFAP1L1Q8TED9 768 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 SUCLG2Q96I99 432 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 PSTPIP2Q9H939 334 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 SLC38A10Q9HBR0 1119 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 MYL3P08590 195 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 DBN1Q16643 649 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 LRGUKQ96M69 825 aa12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 ANGEL1Q9UNK9 670 aaKnown RBP12.3□□□□□ -0.44
PRPF40A-202ENST00000410080 ARHGAP4P98171 946 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 PSMD2Q13200 908 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 NOLC1Q14978 699 aaKnown RBP eCLIP12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 OTUD7AQ8TE49 926 aaPredicted RBP12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 OPHN1O60890 802 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 XRCC5P13010 732 aaKnown RBP12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 NPR1P16066 1061 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 LZTS2Q9BRK4 669 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 CFAP43Q8NDM7 1665 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 ZNF532Q9HCE3 1301 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 IBTKQ9P2D0 1353 aaPredicted RBP12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 CARD14Q9BXL6 1004 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 NUP153P49790 1475 aaKnown RBP12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 H7C0C1 242 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 ADCY8P40145 1251 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 ATP5OP48047 213 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 TFAP4Q01664 338 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 SLC9A5Q14940 896 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 FASTKD5Q7L8L6 764 aaKnown RBP12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 RETREG2Q8NC44 543 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 EYA2O00167 538 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 PPFIA4O75335 1185 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 RRAGAQ7L523 313 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 C7orf31Q8N865 590 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 PRPF38AQ8NAV1 312 aaKnown RBP12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 STAMQ92783 540 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 GSTA4O15217 222 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 ANKRD20A3Q5VUR7 823 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 U2AF1L4Q8WU68 220 aaKnown RBP12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 CCDC127Q96BQ5 260 aa12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 SUCLA2Q9P2R7 463 aaPredicted RBP12.29□□□□□ -0.44
PRPF40A-202ENST00000410080 SOX5P35711 763 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 ANO4Q32M45 955 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 LCA5Q86VQ0 697 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 LMNTD2Q8IXW0 634 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 RNF10Q8N5U6 811 aaKnown RBP12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 KCNH3Q9ULD8 1083 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 MRPL11Q9Y3B7 192 aaKnown RBP12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 SERPINB6P35237 376 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 MCF2L2Q86YR7 1114 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 BBS5Q8N3I7 341 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 ARFGAP2Q8N6H7 521 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 SECISBP2LQ93073 1101 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms