RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 PAGR1Q9BTK6 254 aa16.68■□□□□ 0.26
LIMS2-209ENST00000410038 SPZ1Q9BXG8 430 aa16.68■□□□□ 0.26
LIMS2-209ENST00000410038 RANBP17Q9H2T7 1088 aaKnown RBP16.68■□□□□ 0.26
LIMS2-209ENST00000410038 CPA4Q9UI42 421 aa16.68■□□□□ 0.26
LIMS2-209ENST00000410038 ZBED4O75132 1171 aa16.67■□□□□ 0.26
LIMS2-209ENST00000410038 BCRP11274 1271 aa16.67■□□□□ 0.26
LIMS2-209ENST00000410038 MLLT1Q03111 559 aaPredicted RBP16.67■□□□□ 0.26
LIMS2-209ENST00000410038 TMEM132BQ14DG7 1078 aa16.67■□□□□ 0.26
LIMS2-209ENST00000410038 NTRK3Q16288 839 aa16.67■□□□□ 0.26
LIMS2-209ENST00000410038 ANKRD13CQ8N6S4 541 aa16.67■□□□□ 0.26
LIMS2-209ENST00000410038 GTF3C6Q969F1 213 aa16.67■□□□□ 0.26
LIMS2-209ENST00000410038 ZSCAN31Q96LW9 406 aaPredicted RBP16.67■□□□□ 0.26
LIMS2-209ENST00000410038 MORF4L1Q9UBU8 362 aa16.67■□□□□ 0.26
LIMS2-209ENST00000410038 CNTNAP5Q8WYK1 1306 aa16.66■□□□□ 0.26
LIMS2-209ENST00000410038 FAM110CQ1W6H9 321 aa16.66■□□□□ 0.26
LIMS2-209ENST00000410038 MTMR8Q96EF0 704 aa16.66■□□□□ 0.26
LIMS2-209ENST00000410038 ZNF214Q9UL59 606 aaPredicted RBP16.66■□□□□ 0.26
LIMS2-209ENST00000410038 MGAMO43451 1857 aa16.66■□□□□ 0.26
LIMS2-209ENST00000410038 ZNF536O15090 1300 aa16.66■□□□□ 0.26
LIMS2-209ENST00000410038 ERVK-9P63128 1117 aa16.65■□□□□ 0.26
LIMS2-209ENST00000410038 ERVK-24P63145 666 aa16.65■□□□□ 0.26
LIMS2-209ENST00000410038 ST3GAL1Q11201 340 aa16.65■□□□□ 0.26
LIMS2-209ENST00000410038 CDC37Q16543 378 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-209ENST00000410038 Q3C1V9 767 aa16.65■□□□□ 0.26
LIMS2-209ENST00000410038 CCDC174Q6PII3 467 aa16.65■□□□□ 0.26
LIMS2-209ENST00000410038 CPXCR1Q8N123 301 aa16.65■□□□□ 0.26
LIMS2-209ENST00000410038 TMX3Q96JJ7 454 aa16.65■□□□□ 0.26
LIMS2-209ENST00000410038 PIGSQ96S52 555 aa16.65■□□□□ 0.26
LIMS2-209ENST00000410038 RAVER2Q9HCJ3 691 aaKnown RBP16.65■□□□□ 0.26
LIMS2-209ENST00000410038 SH2B1Q9NRF2 756 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-209ENST00000410038 CTDP1Q9Y5B0 961 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-209ENST00000410038 DOCK3Q8IZD9 2030 aa16.65■□□□□ 0.26
LIMS2-209ENST00000410038 CPLX1O14810 134 aa16.65■□□□□ 0.26
LIMS2-209ENST00000410038 ATP2A1O14983 1001 aa16.65■□□□□ 0.26
LIMS2-209ENST00000410038 IFNAR1P17181 557 aa16.65■□□□□ 0.26
LIMS2-209ENST00000410038 QRICH1Q2TAL8 776 aa16.65■□□□□ 0.26
LIMS2-209ENST00000410038 HOMER1Q86YM7 354 aa16.65■□□□□ 0.26
LIMS2-209ENST00000410038 GPRC5AQ8NFJ5 357 aa16.65■□□□□ 0.26
LIMS2-209ENST00000410038 PIBF1Q8WXW3 757 aa16.65■□□□□ 0.26
LIMS2-209ENST00000410038 hCG_1642624A0A1W2PR95 340 aa16.64■□□□□ 0.25
LIMS2-209ENST00000410038 ZBTB5O15062 677 aa16.64■□□□□ 0.25
LIMS2-209ENST00000410038 PPFIA3O75145 1194 aa16.64■□□□□ 0.25
LIMS2-209ENST00000410038 STAT3P40763 770 aa16.64■□□□□ 0.25
LIMS2-209ENST00000410038 OAZ1P54368 228 aa16.64■□□□□ 0.25
LIMS2-209ENST00000410038 PLS1Q14651 629 aa16.64■□□□□ 0.25
LIMS2-209ENST00000410038 CCDC83Q8IWF9 413 aa16.64■□□□□ 0.25
LIMS2-209ENST00000410038 PHKBQ93100 1093 aa16.64■□□□□ 0.25
LIMS2-209ENST00000410038 SNX21Q969T3 373 aa16.64■□□□□ 0.25
LIMS2-209ENST00000410038 RRP36Q96EU6 259 aaKnown RBP16.64■□□□□ 0.25
LIMS2-209ENST00000410038 AGBL1Q96MI9 1066 aa16.64■□□□□ 0.25
LIMS2-209ENST00000410038 TEX13BQ9BXU2 312 aa16.64■□□□□ 0.25
LIMS2-209ENST00000410038 SPATC1LQ9H0A9 340 aa16.64■□□□□ 0.25
LIMS2-209ENST00000410038 ZSWIM8A7E2V4 1837 aa16.63■□□□□ 0.25
LIMS2-209ENST00000410038 ZNFX1Q9P2E3 1918 aaKnown RBP16.63■□□□□ 0.25
LIMS2-209ENST00000410038 CTDNEP1O95476 244 aa16.63■□□□□ 0.25
LIMS2-209ENST00000410038 ICAM1P05362 532 aa16.63■□□□□ 0.25
LIMS2-209ENST00000410038 SNRNP48Q6IEG0 339 aaKnown RBP16.63■□□□□ 0.25
LIMS2-209ENST00000410038 CPLX2Q6PUV4 134 aaKnown RBP16.63■□□□□ 0.25
LIMS2-209ENST00000410038 MOV10L1Q9BXT6 1211 aaKnown RBP16.63■□□□□ 0.25
LIMS2-209ENST00000410038 V9GY48 417 aaPredicted RBP16.63■□□□□ 0.25
LIMS2-209ENST00000410038 PNMA6FA0A0J9YX94 578 aa16.62■□□□□ 0.25
LIMS2-209ENST00000410038 GPR25O00155 361 aa16.62■□□□□ 0.25
LIMS2-209ENST00000410038 PPP1R11O60927 126 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-209ENST00000410038 DTNBO60941 627 aa16.62■□□□□ 0.25
LIMS2-209ENST00000410038 RIPK3Q9Y572 518 aa16.62■□□□□ 0.25
LIMS2-209ENST00000410038 PRPF3O43395 683 aaKnown RBP16.62■□□□□ 0.25
LIMS2-209ENST00000410038 TAL1P17542 331 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-209ENST00000410038 SLC4A3P48751 1232 aa16.62■□□□□ 0.25
LIMS2-209ENST00000410038 NOM1Q5C9Z4 860 aaKnown RBP16.62■□□□□ 0.25
LIMS2-209ENST00000410038 FBXO11Q86XK2 927 aa16.62■□□□□ 0.25
LIMS2-209ENST00000410038 RIOX2Q8IUF8 465 aa16.62■□□□□ 0.25
LIMS2-209ENST00000410038 SLC26A6Q9BXS9 759 aa16.62■□□□□ 0.25
LIMS2-209ENST00000410038 RNF26Q9BY78 433 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-209ENST00000410038 PORCNQ9H237 461 aa16.62■□□□□ 0.25
LIMS2-209ENST00000410038 SEC63Q9UGP8 760 aaKnown RBP16.62■□□□□ 0.25
LIMS2-209ENST00000410038 CCPG1Q9ULG6 757 aa16.62■□□□□ 0.25
LIMS2-209ENST00000410038 PLXNB2O15031 1838 aa16.61■□□□□ 0.25
LIMS2-209ENST00000410038 CDKL5O76039 1030 aa16.61■□□□□ 0.25
LIMS2-209ENST00000410038 FMNL1O95466 1100 aaPredicted RBP16.61■□□□□ 0.25
LIMS2-209ENST00000410038 CCNA1P78396 465 aa16.61■□□□□ 0.25
LIMS2-209ENST00000410038 SP3Q02447 781 aa16.61■□□□□ 0.25
LIMS2-209ENST00000410038 USH1GQ495M9 461 aa16.61■□□□□ 0.25
LIMS2-209ENST00000410038 NSUN7Q8NE18 718 aaKnown RBP16.61■□□□□ 0.25
LIMS2-209ENST00000410038 AMNQ9BXJ7 453 aa16.61■□□□□ 0.25
LIMS2-209ENST00000410038 K7ELQ4 463 aaPredicted RBP16.6■□□□□ 0.25
LIMS2-209ENST00000410038 SLC25A27O95847 323 aa16.6■□□□□ 0.25
LIMS2-209ENST00000410038 ALAS1P13196 640 aa16.6■□□□□ 0.25
LIMS2-209ENST00000410038 ERCC3P19447 782 aa16.6■□□□□ 0.25
LIMS2-209ENST00000410038 SSRP1Q08945 709 aaKnown RBP16.6■□□□□ 0.25
LIMS2-209ENST00000410038 PKN1Q16512 942 aa16.6■□□□□ 0.25
LIMS2-209ENST00000410038 NCAPG2Q86XI2 1143 aa16.6■□□□□ 0.25
LIMS2-209ENST00000410038 TRIM22Q8IYM9 498 aa16.6■□□□□ 0.25
LIMS2-209ENST00000410038 SHCBP1Q8NEM2 672 aa16.6■□□□□ 0.25
LIMS2-209ENST00000410038 EFCC1Q9HA90 598 aa16.6■□□□□ 0.25
LIMS2-209ENST00000410038 PNMA2Q9UL42 364 aa16.6■□□□□ 0.25
LIMS2-209ENST00000410038 RBBP6Q7Z6E9 1792 aaKnown RBP16.59■□□□□ 0.25
LIMS2-209ENST00000410038 JAK2O60674 1132 aa16.59■□□□□ 0.25
LIMS2-209ENST00000410038 LACTBP83111 547 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-209ENST00000410038 AKAP17AQ02040 695 aaKnown RBP16.59■□□□□ 0.25
LIMS2-209ENST00000410038 HSCBQ8IWL3 235 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms