RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 EIF3AQ14152 1382 aaKnown RBP6.72□□□□□ -1.33
CLK1-202ENST00000409403 KDM2BQ8NHM5 1336 aa6.72□□□□□ -1.33
CLK1-202ENST00000409403 MYOM3Q5VTT5 1437 aa6.72□□□□□ -1.33
CLK1-202ENST00000409403 TNS3Q68CZ2 1445 aa6.72□□□□□ -1.33
CLK1-202ENST00000409403 FANCGO15287 622 aa6.71□□□□□ -1.33
CLK1-202ENST00000409403 KLF4O43474 513 aa6.71□□□□□ -1.33
CLK1-202ENST00000409403 KIF20AO95235 890 aa6.71□□□□□ -1.33
CLK1-202ENST00000409403 GRK4P32298 578 aa6.71□□□□□ -1.33
CLK1-202ENST00000409403 ETF1P62495 437 aaKnown RBP6.71□□□□□ -1.33
CLK1-202ENST00000409403 PPM1JQ5JR12 505 aa6.71□□□□□ -1.33
CLK1-202ENST00000409403 TMEM130Q8N3G9 435 aa6.71□□□□□ -1.33
CLK1-202ENST00000409403 PNISRQ8TF01 805 aaKnown RBP6.71□□□□□ -1.33
CLK1-202ENST00000409403 WNT10AQ9GZT5 417 aa6.71□□□□□ -1.33
CLK1-202ENST00000409403 ZSWIM4Q9H7M6 989 aa6.71□□□□□ -1.33
CLK1-202ENST00000409403 ADAM30Q9UKF2 790 aa6.71□□□□□ -1.33
CLK1-202ENST00000409403 AP4E1Q9UPM8 1137 aa6.71□□□□□ -1.33
CLK1-202ENST00000409403 CICQ96RK0 1608 aaPredicted RBP6.71□□□□□ -1.33
CLK1-202ENST00000409403 KIF15Q9NS87 1388 aa6.71□□□□□ -1.33
CLK1-202ENST00000409403 PKD1L3Q7Z443 1732 aa6.71□□□□□ -1.33
CLK1-202ENST00000409403 KIF7Q2M1P5 1343 aa6.71□□□□□ -1.34
CLK1-202ENST00000409403 MEIS3P2A8K0S8 358 aa6.71□□□□□ -1.34
CLK1-202ENST00000409403 U2SURPO15042 1029 aaKnown RBP6.71□□□□□ -1.34
CLK1-202ENST00000409403 OFD1O75665 1012 aa6.71□□□□□ -1.34
CLK1-202ENST00000409403 PGRP06401 933 aa6.71□□□□□ -1.34
CLK1-202ENST00000409403 ADH5P11766 374 aa6.71□□□□□ -1.34
CLK1-202ENST00000409403 RGS3P49796 1198 aa6.71□□□□□ -1.34
CLK1-202ENST00000409403 SOX4Q06945 474 aaPredicted RBP6.71□□□□□ -1.34
CLK1-202ENST00000409403 CCDC173Q0VFZ6 552 aa6.71□□□□□ -1.34
CLK1-202ENST00000409403 RAB33AQ14088 237 aa6.71□□□□□ -1.34
CLK1-202ENST00000409403 RALBP1Q15311 655 aa6.71□□□□□ -1.34
CLK1-202ENST00000409403 TMEM201Q5SNT2 666 aa6.71□□□□□ -1.34
CLK1-202ENST00000409403 ZBTB37Q5TC79 503 aa6.71□□□□□ -1.34
CLK1-202ENST00000409403 IPO4Q8TEX9 1081 aaKnown RBP6.71□□□□□ -1.34
CLK1-202ENST00000409403 TMEM40Q8WWA1 233 aa6.71□□□□□ -1.34
CLK1-202ENST00000409403 FANCD2OSQ96PS1 177 aa6.71□□□□□ -1.34
CLK1-202ENST00000409403 ATXN3LQ9H3M9 355 aa6.71□□□□□ -1.34
CLK1-202ENST00000409403 GRPEL1Q9HAV7 217 aa6.71□□□□□ -1.34
CLK1-202ENST00000409403 DISC1Q9NRI5 854 aa6.71□□□□□ -1.34
CLK1-202ENST00000409403 GMIPQ9P107 970 aa6.71□□□□□ -1.34
CLK1-202ENST00000409403 ADAMTS8Q9UP79 889 aa6.71□□□□□ -1.34
CLK1-202ENST00000409403 TNRC6CQ9HCJ0 1690 aaKnown RBP6.7□□□□□ -1.34
CLK1-202ENST00000409403 AKAP12Q02952 1782 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 CNTNAP5Q8WYK1 1306 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 MAPK8IP3Q9UPT6 1336 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 NAIPQ13075 1403 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 SPATA31E1Q6ZUB1 1445 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 LRRC37A3O60309 1634 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 DYNC1I1O14576 645 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 SPATA31C1P0DKV0 1188 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 DMTNQ08495 405 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 KCNMA1Q12791 1236 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 SERINC3Q13530 473 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 GRIK4Q16099 956 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 HS1BP3Q53T59 392 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 ANKRD34AQ69YU3 496 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 FDX2Q6P4F2 183 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 SHISA2Q6UWI4 295 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 NOP9Q86U38 636 aaKnown RBP6.7□□□□□ -1.34
CLK1-202ENST00000409403 C12orf50Q8NA57 414 aaPredicted RBP6.7□□□□□ -1.34
CLK1-202ENST00000409403 RNF214Q8ND24 703 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 TM9SF2Q99805 663 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 GTPBP4Q9BZE4 634 aaKnown RBP6.7□□□□□ -1.34
CLK1-202ENST00000409403 ANTXR1Q9H6X2 564 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 ACTR10Q9NZ32 417 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 SIRPGQ9P1W8 387 aa6.7□□□□□ -1.34
CLK1-202ENST00000409403 PHRF1Q9P1Y6 1649 aaKnown RBP6.7□□□□□ -1.34
CLK1-202ENST00000409403 SPATA31A1Q5TZJ5 1347 aa6.69□□□□□ -1.34
CLK1-202ENST00000409403 MYBBP1AQ9BQG0 1328 aaKnown RBP6.69□□□□□ -1.34
CLK1-202ENST00000409403 PITPNM2Q9BZ72 1349 aa6.69□□□□□ -1.34
CLK1-202ENST00000409403 F8W735 103 aaPredicted RBP6.69□□□□□ -1.34
CLK1-202ENST00000409403 PLSCR1O15162 318 aa6.69□□□□□ -1.34
CLK1-202ENST00000409403 LETM1O95202 739 aaPredicted RBP6.69□□□□□ -1.34
CLK1-202ENST00000409403 TIAF1O95411 115 aa6.69□□□□□ -1.34
CLK1-202ENST00000409403 DRD2P14416 443 aa6.69□□□□□ -1.34
CLK1-202ENST00000409403 MSNP26038 577 aaKnown RBP6.69□□□□□ -1.34
CLK1-202ENST00000409403 GSK3AP49840 483 aa6.69□□□□□ -1.34
CLK1-202ENST00000409403 CASP7P55210 303 aa6.69□□□□□ -1.34
CLK1-202ENST00000409403 NFE2L2Q16236 605 aa6.69□□□□□ -1.34
CLK1-202ENST00000409403 SKOR2Q2VWA4 1001 aaPredicted RBP6.69□□□□□ -1.34
CLK1-202ENST00000409403 ZSCAN30Q86W11 494 aa6.69□□□□□ -1.34
CLK1-202ENST00000409403 C19orf47Q8N9M1 422 aaKnown RBP6.69□□□□□ -1.34
CLK1-202ENST00000409403 SLC22A31A6NKX4 558 aa6.68□□□□□ -1.34
CLK1-202ENST00000409403 NTF4P34130 210 aa6.68□□□□□ -1.34
CLK1-202ENST00000409403 LBX1P52954 281 aa6.68□□□□□ -1.34
CLK1-202ENST00000409403 FSTL1Q12841 308 aa6.68□□□□□ -1.34
CLK1-202ENST00000409403 PPP2R5EQ16537 467 aa6.68□□□□□ -1.34
CLK1-202ENST00000409403 OVOS1Q6IE37 1185 aa6.68□□□□□ -1.34
CLK1-202ENST00000409403 RUFY4Q6ZNE9 571 aa6.68□□□□□ -1.34
CLK1-202ENST00000409403 AGGF1Q8N302 714 aaeCLIP6.68□□□□□ -1.34
CLK1-202ENST00000409403 ZNF507Q8TCN5 953 aa6.68□□□□□ -1.34
CLK1-202ENST00000409403 LENG1Q96BZ8 264 aaPredicted RBP6.68□□□□□ -1.34
CLK1-202ENST00000409403 KLHL3Q9UH77 587 aa6.68□□□□□ -1.34
CLK1-202ENST00000409403 NAP1L2Q9ULW6 460 aaPredicted RBP6.68□□□□□ -1.34
CLK1-202ENST00000409403 IQGAP3Q86VI3 1631 aa6.68□□□□□ -1.34
CLK1-202ENST00000409403 CASKIN1Q8WXD9 1431 aa6.68□□□□□ -1.34
CLK1-202ENST00000409403 FMN2Q9NZ56 1722 aa6.68□□□□□ -1.34
CLK1-202ENST00000409403 K7ELQ4 463 aaPredicted RBP6.68□□□□□ -1.34
CLK1-202ENST00000409403 DNAJA2O60884 412 aa6.68□□□□□ -1.34
CLK1-202ENST00000409403 GUCY2CP25092 1073 aa6.68□□□□□ -1.34
CLK1-202ENST00000409403 TTLL4Q14679 1199 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms