RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 SNX17Q15036 470 aa10.96□□□□□ -0.65
NIF3L1-203ENST00000409129 FAM47AQ5JRC9 791 aa10.96□□□□□ -0.65
NIF3L1-203ENST00000409129 STK11IPQ8N1F8 1099 aa10.96□□□□□ -0.65
NIF3L1-203ENST00000409129 APPBP2Q92624 585 aa10.96□□□□□ -0.65
NIF3L1-203ENST00000409129 TIFAQ96CG3 184 aa10.96□□□□□ -0.65
NIF3L1-203ENST00000409129 GPATCH3Q96I76 525 aa10.96□□□□□ -0.65
NIF3L1-203ENST00000409129 SLF1Q9BQI6 1058 aa10.96□□□□□ -0.65
NIF3L1-203ENST00000409129 HCN4Q9Y3Q4 1203 aa10.96□□□□□ -0.65
NIF3L1-203ENST00000409129 FAM86C2PA6NEL3 165 aa10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 ZFYP08048 801 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 ZNF865P0CJ78 1059 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 RARBP10826 455 aa10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 TAL1P17542 331 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 GNAT2P19087 354 aa10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 KCNQ1P51787 676 aa10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 TLE2Q04725 743 aa10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 PDAP1Q13442 181 aaKnown RBP10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 C1orf53Q5VUE5 145 aa10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 ZNF444Q8N0Y2 327 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 PRPF38AQ8NAV1 312 aaKnown RBP10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 SPRYD3Q8NCJ5 442 aa10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 SNX27Q96L92 541 aa10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 GAS2L1Q99501 681 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 NUP88Q99567 741 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 C1QTNF1Q9BXJ1 281 aa10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 XPNPEP3Q9NQH7 507 aa10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 CLIP2Q9UDT6 1046 aa10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 PHF24Q9UPV7 400 aa10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 TRANK1O15050 2925 aa10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 COL11A1P12107 1806 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 BRWD1Q9NSI6 2320 aa10.95□□□□□ -0.66
NIF3L1-203ENST00000409129 MYH7P12883 1935 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 ROBO3Q96MS0 1386 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 PARP14Q460N5 1801 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 IGKV6D-41A0A0C4DH26 115 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 PATL2C9JE40 543 aaKnown RBP10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 GPAA1O43292 621 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 ZBED4O75132 1171 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 NDUFB10O96000 172 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 PGK1P00558 417 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 APPP05067 770 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 IGFBP4P22692 258 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 PSEN1P49768 467 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 TSHZ3Q63HK5 1081 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 SNRNP48Q6IEG0 339 aaKnown RBP10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 RNF180Q86T96 592 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 MSL3Q8N5Y2 521 aaKnown RBP10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 IL27Q8NEV9 243 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 KHSRPQ92945 711 aaKnown RBP eCLIP10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 MKL1Q969V6 931 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 TEX13BQ9BXU2 312 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 ZNF287Q9HBT7 754 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 EPB41L4AQ9HCS5 686 aaPredicted RBP10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 CNPY2Q9Y2B0 182 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 RIPK3Q9Y572 518 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 WDFY4Q6ZS81 3184 aa10.94□□□□□ -0.66
NIF3L1-203ENST00000409129 M0R2C6 588 aa10.93□□□□□ -0.66
NIF3L1-203ENST00000409129 ATP2A1O14983 1001 aa10.93□□□□□ -0.66
NIF3L1-203ENST00000409129 BMP1P13497 986 aa10.93□□□□□ -0.66
NIF3L1-203ENST00000409129 AKR1A1P14550 325 aa10.93□□□□□ -0.66
NIF3L1-203ENST00000409129 TDO2P48775 406 aa10.93□□□□□ -0.66
NIF3L1-203ENST00000409129 LRRFIP1Q32MZ4 808 aaKnown RBP10.93□□□□□ -0.66
NIF3L1-203ENST00000409129 AKNAD1Q5T1N1 836 aa10.93□□□□□ -0.66
NIF3L1-203ENST00000409129 IFNL3Q8IZI9 196 aa10.93□□□□□ -0.66
NIF3L1-203ENST00000409129 DDX11Q96FC9 970 aa10.93□□□□□ -0.66
NIF3L1-203ENST00000409129 PBX4Q9BYU1 374 aa10.93□□□□□ -0.66
NIF3L1-203ENST00000409129 C11orf16Q9NQ32 467 aa10.93□□□□□ -0.66
NIF3L1-203ENST00000409129 MTMR4Q9NYA4 1195 aa10.93□□□□□ -0.66
NIF3L1-203ENST00000409129 CTDP1Q9Y5B0 961 aaPredicted RBP10.93□□□□□ -0.66
NIF3L1-203ENST00000409129 TACC3Q9Y6A5 838 aa10.93□□□□□ -0.66
NIF3L1-203ENST00000409129 MCM3APO60318 1980 aa10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 DNAJC25-GNG10A0A024R161 153 aa10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 A0A1W2PQ45 241 aaPredicted RBP10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 A0A1W2PQY0 241 aa10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 PRDM1O75626 825 aa10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 SNAI1O95863 264 aaPredicted RBP10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 SLC4A3P48751 1232 aa10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 MAMDC4Q6UXC1 1216 aa10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 CPXCR1Q8N123 301 aa10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 MICALL1Q8N3F8 863 aa10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 KIFC2Q96AC6 838 aa10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 CEP95Q96GE4 821 aa10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 TSEN34Q9BSV6 310 aaKnown RBP10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 SLC38A10Q9HBR0 1119 aa10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 FEM1BQ9UK73 627 aa10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 FAM184BQ9ULE4 1060 aa10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 SYNPO2Q9UMS6 1093 aa10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 GREB1LQ9C091 1923 aaPredicted RBP10.92□□□□□ -0.66
NIF3L1-203ENST00000409129 TTC41PQ6P2S7 1318 aa10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 ERC2O15083 957 aa10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 GTPBP6O43824 516 aaPredicted RBP10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 PQBP1O60828 265 aaKnown RBP10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 ADAMTS4O75173 837 aa10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 TTLL1O95922 423 aa10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 CLTBP09497 229 aa10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 RAG1P15918 1043 aa10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 FPGSQ05932 587 aa10.91□□□□□ -0.66
NIF3L1-203ENST00000409129 PDE4BQ07343 736 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms