RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 Q3C1V9 767 aa17.58■□□□□ 0.4
SNRNP27-202ENST00000409116 HOMER1Q86YM7 354 aa17.58■□□□□ 0.4
SNRNP27-202ENST00000409116 GPRC5AQ8NFJ5 357 aa17.58■□□□□ 0.4
SNRNP27-202ENST00000409116 LZTS2Q9BRK4 669 aa17.58■□□□□ 0.4
SNRNP27-202ENST00000409116 SPZ1Q9BXG8 430 aa17.58■□□□□ 0.4
SNRNP27-202ENST00000409116 SPATC1LQ9H0A9 340 aa17.58■□□□□ 0.4
SNRNP27-202ENST00000409116 RIOX1Q9H6W3 641 aa17.58■□□□□ 0.4
SNRNP27-202ENST00000409116 ZNF536O15090 1300 aa17.57■□□□□ 0.4
SNRNP27-202ENST00000409116 CCDC196A0A1B0GTZ2 297 aa17.57■□□□□ 0.4
SNRNP27-202ENST00000409116 hCG_1642624A0A1W2PR95 340 aa17.57■□□□□ 0.4
SNRNP27-202ENST00000409116 DTNBO60941 627 aa17.57■□□□□ 0.4
SNRNP27-202ENST00000409116 PPFIA3O75145 1194 aa17.57■□□□□ 0.4
SNRNP27-202ENST00000409116 FDX1P10109 184 aa17.57■□□□□ 0.4
SNRNP27-202ENST00000409116 FUT2Q10981 343 aa17.57■□□□□ 0.4
SNRNP27-202ENST00000409116 SCRN1Q12765 414 aa17.57■□□□□ 0.4
SNRNP27-202ENST00000409116 CDC37Q16543 378 aaPredicted RBP17.57■□□□□ 0.4
SNRNP27-202ENST00000409116 SNRNP48Q6IEG0 339 aaKnown RBP17.57■□□□□ 0.4
SNRNP27-202ENST00000409116 AGBL1Q96MI9 1066 aa17.57■□□□□ 0.4
SNRNP27-202ENST00000409116 PIGSQ96S52 555 aa17.57■□□□□ 0.4
SNRNP27-202ENST00000409116 MOV10L1Q9BXT6 1211 aaKnown RBP17.57■□□□□ 0.4
SNRNP27-202ENST00000409116 PORCNQ9H237 461 aa17.57■□□□□ 0.4
SNRNP27-202ENST00000409116 SLKQ9H2G2 1235 aaPredicted RBP17.57■□□□□ 0.4
SNRNP27-202ENST00000409116 CNTNAP5Q8WYK1 1306 aa17.57■□□□□ 0.4
SNRNP27-202ENST00000409116 HSPA8P11142 646 aaKnown RBP17.56■□□□□ 0.4
SNRNP27-202ENST00000409116 SP3Q02447 781 aa17.56■□□□□ 0.4
SNRNP27-202ENST00000409116 PPP2R5BQ15173 497 aa17.56■□□□□ 0.4
SNRNP27-202ENST00000409116 QRICH1Q2TAL8 776 aa17.56■□□□□ 0.4
SNRNP27-202ENST00000409116 MTMR8Q96EF0 704 aa17.56■□□□□ 0.4
SNRNP27-202ENST00000409116 TEX13BQ9BXU2 312 aa17.56■□□□□ 0.4
SNRNP27-202ENST00000409116 BAZ2BQ9UIF8 2168 aaKnown RBP17.56■□□□□ 0.4
SNRNP27-202ENST00000409116 PPP1R11O60927 126 aaPredicted RBP17.55■□□□□ 0.4
SNRNP27-202ENST00000409116 STAT3P40763 770 aa17.55■□□□□ 0.4
SNRNP27-202ENST00000409116 ST3GAL1Q11201 340 aa17.55■□□□□ 0.4
SNRNP27-202ENST00000409116 ZNF296Q8WUU4 475 aaPredicted RBP17.55■□□□□ 0.4
SNRNP27-202ENST00000409116 PHKBQ93100 1093 aa17.55■□□□□ 0.4
SNRNP27-202ENST00000409116 GTF3C6Q969F1 213 aa17.55■□□□□ 0.4
SNRNP27-202ENST00000409116 ARHGAP39Q9C0H5 1083 aa17.55■□□□□ 0.4
SNRNP27-202ENST00000409116 CCPG1Q9ULG6 757 aa17.55■□□□□ 0.4
SNRNP27-202ENST00000409116 RIPK3Q9Y572 518 aa17.55■□□□□ 0.4
SNRNP27-202ENST00000409116 CPLX1O14810 134 aa17.54■□□□□ 0.4
SNRNP27-202ENST00000409116 ZBTB5O15062 677 aa17.54■□□□□ 0.4
SNRNP27-202ENST00000409116 FKTNO75072 461 aa17.54■□□□□ 0.4
SNRNP27-202ENST00000409116 ICAM1P05362 532 aa17.54■□□□□ 0.4
SNRNP27-202ENST00000409116 SMARCA1P28370 1054 aa17.54■□□□□ 0.4
SNRNP27-202ENST00000409116 OAZ1P54368 228 aa17.54■□□□□ 0.4
SNRNP27-202ENST00000409116 CCNA1P78396 465 aa17.54■□□□□ 0.4
SNRNP27-202ENST00000409116 CAP1Q01518 475 aa17.54■□□□□ 0.4
SNRNP27-202ENST00000409116 NTRK3Q16288 839 aa17.54■□□□□ 0.4
SNRNP27-202ENST00000409116 USH1GQ495M9 461 aa17.54■□□□□ 0.4
SNRNP27-202ENST00000409116 WDR78Q5VTH9 848 aa17.54■□□□□ 0.4
SNRNP27-202ENST00000409116 RIOX2Q8IUF8 465 aa17.54■□□□□ 0.4
SNRNP27-202ENST00000409116 CD99L2Q8TCZ2 262 aa17.54■□□□□ 0.4
SNRNP27-202ENST00000409116 RRP36Q96EU6 259 aaKnown RBP17.54■□□□□ 0.4
SNRNP27-202ENST00000409116 EFCC1Q9HA90 598 aa17.54■□□□□ 0.4
SNRNP27-202ENST00000409116 HOMER2Q9NSB8 354 aa17.54■□□□□ 0.4
SNRNP27-202ENST00000409116 ZSWIM8A7E2V4 1837 aa17.54■□□□□ 0.4
SNRNP27-202ENST00000409116 HTTP42858 3142 aa17.53■□□□□ 0.4
SNRNP27-202ENST00000409116 ATP2A1O14983 1001 aa17.53■□□□□ 0.4
SNRNP27-202ENST00000409116 ALAS1P13196 640 aa17.53■□□□□ 0.4
SNRNP27-202ENST00000409116 IFNAR1P17181 557 aa17.53■□□□□ 0.4
SNRNP27-202ENST00000409116 ERCC3P19447 782 aa17.53■□□□□ 0.4
SNRNP27-202ENST00000409116 CTGFP29279 349 aa17.53■□□□□ 0.4
SNRNP27-202ENST00000409116 CTCFP49711 727 aaPredicted RBP17.53■□□□□ 0.4
SNRNP27-202ENST00000409116 LBX1P52954 281 aa17.53■□□□□ 0.4
SNRNP27-202ENST00000409116 LACTBP83111 547 aaPredicted RBP17.53■□□□□ 0.4
SNRNP27-202ENST00000409116 NOM1Q5C9Z4 860 aaKnown RBP17.53■□□□□ 0.4
SNRNP27-202ENST00000409116 NCAPG2Q86XI2 1143 aa17.53■□□□□ 0.4
SNRNP27-202ENST00000409116 CCDC83Q8IWF9 413 aa17.53■□□□□ 0.4
SNRNP27-202ENST00000409116 CCAR1Q8IX12 1150 aaKnown RBP17.53■□□□□ 0.4
SNRNP27-202ENST00000409116 IL27Q8NEV9 243 aa17.53■□□□□ 0.4
SNRNP27-202ENST00000409116 TMX3Q96JJ7 454 aa17.53■□□□□ 0.4
SNRNP27-202ENST00000409116 ZSCAN31Q96LW9 406 aaPredicted RBP17.53■□□□□ 0.4
SNRNP27-202ENST00000409116 SLC26A6Q9BXS9 759 aa17.53■□□□□ 0.4
SNRNP27-202ENST00000409116 V9GY48 417 aaPredicted RBP17.53■□□□□ 0.4
SNRNP27-202ENST00000409116 PNMA6FA0A0J9YX94 578 aa17.52■□□□□ 0.4
SNRNP27-202ENST00000409116 CTDNEP1O95476 244 aa17.52■□□□□ 0.4
SNRNP27-202ENST00000409116 MCM2P49736 904 aa17.52■□□□□ 0.4
SNRNP27-202ENST00000409116 FBXO11Q86XK2 927 aa17.52■□□□□ 0.4
SNRNP27-202ENST00000409116 TRIM47Q96LD4 638 aa17.52■□□□□ 0.4
SNRNP27-202ENST00000409116 SH2B1Q9NRF2 756 aaPredicted RBP17.52■□□□□ 0.4
SNRNP27-202ENST00000409116 SEC63Q9UGP8 760 aaKnown RBP17.52■□□□□ 0.4
SNRNP27-202ENST00000409116 SLC25A27O95847 323 aa17.51■□□□□ 0.39
SNRNP27-202ENST00000409116 MAPK4P31152 587 aa17.51■□□□□ 0.39
SNRNP27-202ENST00000409116 PSMC4P43686 418 aa17.51■□□□□ 0.39
SNRNP27-202ENST00000409116 MUM1L1Q5H9M0 696 aa17.51■□□□□ 0.39
SNRNP27-202ENST00000409116 CPLX2Q6PUV4 134 aaKnown RBP17.51■□□□□ 0.39
SNRNP27-202ENST00000409116 SHCBP1Q8NEM2 672 aa17.51■□□□□ 0.39
SNRNP27-202ENST00000409116 AMNQ9BXJ7 453 aa17.51■□□□□ 0.39
SNRNP27-202ENST00000409116 CWC22Q9HCG8 908 aaKnown RBP17.51■□□□□ 0.39
SNRNP27-202ENST00000409116 RNF146Q9NTX7 359 aa17.51■□□□□ 0.39
SNRNP27-202ENST00000409116 PCDHA1Q9Y5I3 950 aa17.51■□□□□ 0.39
SNRNP27-202ENST00000409116 JAK2O60674 1132 aa17.5■□□□□ 0.39
SNRNP27-202ENST00000409116 FMNL1O95466 1100 aaPredicted RBP17.5■□□□□ 0.39
SNRNP27-202ENST00000409116 SSRP1Q08945 709 aaKnown RBP17.5■□□□□ 0.39
SNRNP27-202ENST00000409116 KIF22Q14807 665 aa17.5■□□□□ 0.39
SNRNP27-202ENST00000409116 HEATR3Q7Z4Q2 680 aa17.5■□□□□ 0.39
SNRNP27-202ENST00000409116 GPKOWQ92917 476 aaPredicted RBP eCLIP17.5■□□□□ 0.39
SNRNP27-202ENST00000409116 COA7Q96BR5 231 aa17.5■□□□□ 0.39
SNRNP27-202ENST00000409116 ERO1AQ96HE7 468 aa17.5■□□□□ 0.39
SNRNP27-202ENST00000409116 TRERF1Q96PN7 1200 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms