RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 GPATCH4Q5T3I0 446 aaKnown RBP21.74■■□□□ 1.07
PTPN18-203ENST00000409022 SYDE2Q5VT97 1194 aa21.74■■□□□ 1.07
PTPN18-203ENST00000409022 MAMDC4Q6UXC1 1216 aa21.74■■□□□ 1.07
PTPN18-203ENST00000409022 BTNL9Q6UXG8 535 aa21.74■■□□□ 1.07
PTPN18-203ENST00000409022 CHRDL2Q6WN34 429 aa21.74■■□□□ 1.07
PTPN18-203ENST00000409022 C7orf61Q8IZ16 206 aa21.74■■□□□ 1.07
PTPN18-203ENST00000409022 TRERF1Q96PN7 1200 aa21.74■■□□□ 1.07
PTPN18-203ENST00000409022 SENP6Q9GZR1 1112 aaPredicted RBP21.74■■□□□ 1.07
PTPN18-203ENST00000409022 KAT14Q9H8E8 782 aa21.74■■□□□ 1.07
PTPN18-203ENST00000409022 CCPG1Q9ULG6 757 aa21.74■■□□□ 1.07
PTPN18-203ENST00000409022 COLQQ9Y215 455 aaPredicted RBP21.74■■□□□ 1.07
PTPN18-203ENST00000409022 POTEB2H3BUK9 544 aa21.73■■□□□ 1.07
PTPN18-203ENST00000409022 MYCNP04198 464 aaPredicted RBP21.73■■□□□ 1.07
PTPN18-203ENST00000409022 ICAM1P05362 532 aa21.73■■□□□ 1.07
PTPN18-203ENST00000409022 PDHBP11177 359 aa21.73■■□□□ 1.07
PTPN18-203ENST00000409022 CHMLP26374 656 aa21.73■■□□□ 1.07
PTPN18-203ENST00000409022 AGBL1Q96MI9 1066 aa21.73■■□□□ 1.07
PTPN18-203ENST00000409022 UBAC1Q9BSL1 405 aa21.73■■□□□ 1.07
PTPN18-203ENST00000409022 U3KPZ7 1027 aaPredicted RBP21.73■■□□□ 1.07
PTPN18-203ENST00000409022 RNF180Q86T96 592 aa21.72■■□□□ 1.07
PTPN18-203ENST00000409022 ZSCAN10Q96SZ4 725 aaPredicted RBP21.72■■□□□ 1.07
PTPN18-203ENST00000409022 RANBP17Q9H2T7 1088 aaKnown RBP21.72■■□□□ 1.07
PTPN18-203ENST00000409022 GPCPD1Q9NPB8 672 aa21.72■■□□□ 1.07
PTPN18-203ENST00000409022 XPNPEP3Q9NQH7 507 aa21.72■■□□□ 1.07
PTPN18-203ENST00000409022 FAM184BQ9ULE4 1060 aa21.72■■□□□ 1.07
PTPN18-203ENST00000409022 ZNF536O15090 1300 aa21.72■■□□□ 1.07
PTPN18-203ENST00000409022 FRMPD2Q68DX3 1309 aaPredicted RBP21.72■■□□□ 1.07
PTPN18-203ENST00000409022 COL11A1P12107 1806 aaPredicted RBP21.71■■□□□ 1.07
PTPN18-203ENST00000409022 B4E1Z4 1266 aa21.71■■□□□ 1.07
PTPN18-203ENST00000409022 SLC34A2O95436 690 aa21.71■■□□□ 1.07
PTPN18-203ENST00000409022 ZNF543Q08ER8 600 aa21.71■■□□□ 1.07
PTPN18-203ENST00000409022 ANO1Q5XXA6 986 aa21.71■■□□□ 1.07
PTPN18-203ENST00000409022 CENPQQ7L2Z9 268 aaPredicted RBP21.71■■□□□ 1.07
PTPN18-203ENST00000409022 ZKSCAN3Q9BRR0 538 aa21.71■■□□□ 1.07
PTPN18-203ENST00000409022 ABHD16BQ9H3Z7 469 aa21.71■■□□□ 1.07
PTPN18-203ENST00000409022 ZHX1Q9UKY1 873 aaPredicted RBP21.71■■□□□ 1.07
PTPN18-203ENST00000409022 CEP290O15078 2479 aa21.7■■□□□ 1.06
PTPN18-203ENST00000409022 ASB14A6NK59 587 aa21.7■■□□□ 1.06
PTPN18-203ENST00000409022 ZNF865P0CJ78 1059 aaPredicted RBP21.7■■□□□ 1.06
PTPN18-203ENST00000409022 SNHG28P0DPA3 235 aa21.7■■□□□ 1.06
PTPN18-203ENST00000409022 SLC16A2P36021 539 aa21.7■■□□□ 1.06
PTPN18-203ENST00000409022 GJC2Q5T442 439 aaPredicted RBP21.7■■□□□ 1.06
PTPN18-203ENST00000409022 TTBK2Q6IQ55 1244 aa21.7■■□□□ 1.06
PTPN18-203ENST00000409022 PNMA1Q8ND90 353 aa21.7■■□□□ 1.06
PTPN18-203ENST00000409022 ANKS1AQ92625 1134 aa21.7■■□□□ 1.06
PTPN18-203ENST00000409022 A1CFQ9NQ94 594 aaKnown RBP21.7■■□□□ 1.06
PTPN18-203ENST00000409022 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.7■■□□□ 1.06
PTPN18-203ENST00000409022 KIAA1211Q6ZU35 1233 aa21.69■■□□□ 1.06
PTPN18-203ENST00000409022 RASGRP2Q7LDG7 609 aa21.69■■□□□ 1.06
PTPN18-203ENST00000409022 SPC25Q9HBM1 224 aa21.69■■□□□ 1.06
PTPN18-203ENST00000409022 ZSWIM5Q9P217 1185 aa21.69■■□□□ 1.06
PTPN18-203ENST00000409022 A0A1W2PPC1 479 aa21.68■■□□□ 1.06
PTPN18-203ENST00000409022 SGSM2O43147 1006 aa21.68■■□□□ 1.06
PTPN18-203ENST00000409022 SNAI1O95863 264 aaPredicted RBP21.68■■□□□ 1.06
PTPN18-203ENST00000409022 SNAP25P60880 206 aa21.68■■□□□ 1.06
PTPN18-203ENST00000409022 ACVR2BQ13705 512 aa21.68■■□□□ 1.06
PTPN18-203ENST00000409022 LRRC41Q15345 812 aa21.68■■□□□ 1.06
PTPN18-203ENST00000409022 LRRC26Q2I0M4 334 aa21.68■■□□□ 1.06
PTPN18-203ENST00000409022 NSMFQ6X4W1 530 aa21.68■■□□□ 1.06
PTPN18-203ENST00000409022 ARMCX2Q7L311 632 aa21.68■■□□□ 1.06
PTPN18-203ENST00000409022 RALYLQ86SE5 291 aaKnown RBP21.68■■□□□ 1.06
PTPN18-203ENST00000409022 FAM133AQ8N9E0 248 aa21.68■■□□□ 1.06
PTPN18-203ENST00000409022 PRKAG2Q9UGJ0 569 aa21.68■■□□□ 1.06
PTPN18-203ENST00000409022 ZMYND8Q9ULU4 1186 aaPredicted RBP21.68■■□□□ 1.06
PTPN18-203ENST00000409022 TNKSO95271 1327 aa21.68■■□□□ 1.06
PTPN18-203ENST00000409022 WDR19Q8NEZ3 1342 aa21.67■■□□□ 1.06
PTPN18-203ENST00000409022 ERICH2A1L162 156 aa21.67■■□□□ 1.06
PTPN18-203ENST00000409022 TAL1P17542 331 aaPredicted RBP21.67■■□□□ 1.06
PTPN18-203ENST00000409022 ASPRV1Q53RT3 343 aa21.67■■□□□ 1.06
PTPN18-203ENST00000409022 IFIT1BQ5T764 474 aaKnown RBP21.67■■□□□ 1.06
PTPN18-203ENST00000409022 ENAHQ8N8S7 591 aaPredicted RBP21.67■■□□□ 1.06
PTPN18-203ENST00000409022 MPHOSPH6Q99547 160 aaKnown RBP21.67■■□□□ 1.06
PTPN18-203ENST00000409022 ADD3Q9UEY8 706 aaKnown RBP21.67■■□□□ 1.06
PTPN18-203ENST00000409022 ATN1P54259 1190 aaPredicted RBP21.66■■□□□ 1.06
PTPN18-203ENST00000409022 SART3Q15020 963 aaKnown RBP21.66■■□□□ 1.06
PTPN18-203ENST00000409022 CCDC144CPQ8IYA2 1237 aa21.66■■□□□ 1.06
PTPN18-203ENST00000409022 IL25Q9H293 177 aa21.66■■□□□ 1.06
PTPN18-203ENST00000409022 CYP39A1Q9NYL5 469 aa21.66■■□□□ 1.06
PTPN18-203ENST00000409022 RBM27Q9P2N5 1060 aaKnown RBP21.66■■□□□ 1.06
PTPN18-203ENST00000409022 DUSP11O75319 330 aaKnown RBP21.65■■□□□ 1.06
PTPN18-203ENST00000409022 PARP1P09874 1014 aaKnown RBP21.65■■□□□ 1.06
PTPN18-203ENST00000409022 CNTN2Q02246 1040 aa21.65■■□□□ 1.06
PTPN18-203ENST00000409022 TSEN34Q9BSV6 310 aaKnown RBP21.65■■□□□ 1.06
PTPN18-203ENST00000409022 LOC102724159A0A0B4J2E5 919 aa21.64■■□□□ 1.05
PTPN18-203ENST00000409022 DHX16O60231 1041 aaKnown RBP21.64■■□□□ 1.05
PTPN18-203ENST00000409022 PGK1P00558 417 aa21.64■■□□□ 1.05
PTPN18-203ENST00000409022 ADCYAP1R1P41586 468 aa21.64■■□□□ 1.05
PTPN18-203ENST00000409022 PWP2Q15269 919 aaKnown RBP21.64■■□□□ 1.05
PTPN18-203ENST00000409022 MUM1L1Q5H9M0 696 aa21.64■■□□□ 1.05
PTPN18-203ENST00000409022 SLC39A5Q6ZMH5 540 aa21.64■■□□□ 1.05
PTPN18-203ENST00000409022 NCOA7Q8NI08 942 aa21.64■■□□□ 1.05
PTPN18-203ENST00000409022 MAF1Q9H063 256 aa21.64■■□□□ 1.05
PTPN18-203ENST00000409022 PHF24Q9UPV7 400 aa21.64■■□□□ 1.05
PTPN18-203ENST00000409022 PTPDC1A2A3K4 754 aa21.63■■□□□ 1.05
PTPN18-203ENST00000409022 B4DLN1 442 aa21.63■■□□□ 1.05
PTPN18-203ENST00000409022 CYP21A2P08686 494 aa21.63■■□□□ 1.05
PTPN18-203ENST00000409022 GOLGA8HP0CJ92 632 aa21.63■■□□□ 1.05
PTPN18-203ENST00000409022 SYN1P17600 705 aa21.63■■□□□ 1.05
PTPN18-203ENST00000409022 BMP8BP34820 402 aa21.63■■□□□ 1.05
PTPN18-203ENST00000409022 MRPL12P52815 198 aaKnown RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms