RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 TMEM47Q9BQJ4 181 aa18.67■□□□□ 0.58
COL23A1-202ENST00000407622 PYM1Q9BRP8 204 aaKnown RBP18.67■□□□□ 0.58
COL23A1-202ENST00000407622 KIF20AO95235 890 aa18.66■□□□□ 0.58
COL23A1-202ENST00000407622 TXLNAP40222 546 aa18.66■□□□□ 0.58
COL23A1-202ENST00000407622 ZNF569Q5MCW4 686 aa18.66■□□□□ 0.58
COL23A1-202ENST00000407622 DTHD1Q6ZMT9 781 aa18.66■□□□□ 0.58
COL23A1-202ENST00000407622 NUP88Q99567 741 aaPredicted RBP18.66■□□□□ 0.58
COL23A1-202ENST00000407622 KLRC4O43908 158 aa18.66■□□□□ 0.58
COL23A1-202ENST00000407622 RASA1P20936 1047 aa18.66■□□□□ 0.58
COL23A1-202ENST00000407622 CC2D1AQ6P1N0 951 aaPredicted RBP18.66■□□□□ 0.58
COL23A1-202ENST00000407622 ADSSL1Q8N142 457 aa18.66■□□□□ 0.58
COL23A1-202ENST00000407622 GPR161Q8N6U8 529 aaKnown RBP18.66■□□□□ 0.58
COL23A1-202ENST00000407622 PARD6BQ9BYG5 372 aa18.66■□□□□ 0.58
COL23A1-202ENST00000407622 RMND1Q9NWS8 449 aa18.66■□□□□ 0.58
COL23A1-202ENST00000407622 PLSCR1O15162 318 aa18.65■□□□□ 0.58
COL23A1-202ENST00000407622 TBC1D8O95759 1140 aa18.65■□□□□ 0.58
COL23A1-202ENST00000407622 RASSF8Q8NHQ8 419 aa18.65■□□□□ 0.58
COL23A1-202ENST00000407622 BARHL2Q9NY43 387 aa18.65■□□□□ 0.58
COL23A1-202ENST00000407622 PUF60Q9UHX1 559 aaKnown RBP18.65■□□□□ 0.58
COL23A1-202ENST00000407622 KIF5CO60282 957 aa18.65■□□□□ 0.58
COL23A1-202ENST00000407622 APBA3O96018 575 aa18.65■□□□□ 0.58
COL23A1-202ENST00000407622 TPM1P09493 284 aa18.65■□□□□ 0.58
COL23A1-202ENST00000407622 PARP1P09874 1014 aaKnown RBP18.65■□□□□ 0.58
COL23A1-202ENST00000407622 UBXN1Q04323 297 aa18.65■□□□□ 0.58
COL23A1-202ENST00000407622 SLC35F6Q8N357 371 aa18.65■□□□□ 0.58
COL23A1-202ENST00000407622 WDR66Q8TBY9 1149 aa18.65■□□□□ 0.58
COL23A1-202ENST00000407622 CCDC51Q96ER9 411 aa18.65■□□□□ 0.58
COL23A1-202ENST00000407622 CDK5RAP2Q96SN8 1893 aa18.65■□□□□ 0.58
COL23A1-202ENST00000407622 CHP1Q99653 195 aa18.65■□□□□ 0.58
COL23A1-202ENST00000407622 MYH1P12882 1939 aa18.64■□□□□ 0.58
COL23A1-202ENST00000407622 PALM3A6NDB9 673 aaPredicted RBP18.64■□□□□ 0.57
COL23A1-202ENST00000407622 ARHGAP25P42331 645 aa18.64■□□□□ 0.57
COL23A1-202ENST00000407622 SPAG1Q07617 926 aa18.64■□□□□ 0.57
COL23A1-202ENST00000407622 ZNF444Q8N0Y2 327 aaPredicted RBP18.64■□□□□ 0.57
COL23A1-202ENST00000407622 DAGLBQ8NCG7 672 aa18.64■□□□□ 0.57
COL23A1-202ENST00000407622 KRT9P35527 623 aa18.63■□□□□ 0.57
COL23A1-202ENST00000407622 RABGGTAQ92696 567 aa18.63■□□□□ 0.57
COL23A1-202ENST00000407622 GOLGA1Q92805 767 aa18.63■□□□□ 0.57
COL23A1-202ENST00000407622 EEF2KMTQ96G04 330 aa18.63■□□□□ 0.57
COL23A1-202ENST00000407622 SLF1Q9BQI6 1058 aa18.63■□□□□ 0.57
COL23A1-202ENST00000407622 RTFDC1Q9BY42 306 aaPredicted RBP18.63■□□□□ 0.57
COL23A1-202ENST00000407622 SNED1Q8TER0 1413 aa18.63■□□□□ 0.57
COL23A1-202ENST00000407622 GRAPQ13588 217 aa18.63■□□□□ 0.57
COL23A1-202ENST00000407622 TMTC1Q8IUR5 882 aa18.63■□□□□ 0.57
COL23A1-202ENST00000407622 GRAPLQ8TC17 118 aaPredicted RBP18.63■□□□□ 0.57
COL23A1-202ENST00000407622 FLT1P17948 1338 aa18.63■□□□□ 0.57
COL23A1-202ENST00000407622 KLRF2D3W0D1 207 aa18.62■□□□□ 0.57
COL23A1-202ENST00000407622 UBA7P41226 1012 aa18.62■□□□□ 0.57
COL23A1-202ENST00000407622 GNAQP50148 359 aa18.62■□□□□ 0.57
COL23A1-202ENST00000407622 CCDC148Q8NFR7 591 aa18.62■□□□□ 0.57
COL23A1-202ENST00000407622 TCP11L1Q9NUJ3 509 aa18.62■□□□□ 0.57
COL23A1-202ENST00000407622 KBTBD4Q9NVX7 518 aa18.62■□□□□ 0.57
COL23A1-202ENST00000407622 DDX60LQ5H9U9 1706 aaKnown RBP18.62■□□□□ 0.57
COL23A1-202ENST00000407622 TTC26A0AVF1 554 aa18.62■□□□□ 0.57
COL23A1-202ENST00000407622 H7C1D1 291 aa18.62■□□□□ 0.57
COL23A1-202ENST00000407622 CHMP4BP1P59074 171 aa18.62■□□□□ 0.57
COL23A1-202ENST00000407622 PPP4CP60510 307 aa18.62■□□□□ 0.57
COL23A1-202ENST00000407622 CYP26C1Q6V0L0 522 aa18.62■□□□□ 0.57
COL23A1-202ENST00000407622 SRGAP1Q7Z6B7 1085 aa18.62■□□□□ 0.57
COL23A1-202ENST00000407622 TRIM10Q9UDY6 481 aa18.62■□□□□ 0.57
COL23A1-202ENST00000407622 CDC23Q9UJX2 597 aa18.62■□□□□ 0.57
COL23A1-202ENST00000407622 TTF2Q9UNY4 1162 aaKnown RBP18.62■□□□□ 0.57
COL23A1-202ENST00000407622 REXO2Q9Y3B8 237 aaKnown RBP18.62■□□□□ 0.57
COL23A1-202ENST00000407622 BAG3O95817 575 aa18.61■□□□□ 0.57
COL23A1-202ENST00000407622 PLCG1P19174 1290 aa18.61■□□□□ 0.57
COL23A1-202ENST00000407622 BTDP43251 543 aa18.61■□□□□ 0.57
COL23A1-202ENST00000407622 KIF4BQ2VIQ3 1234 aa18.61■□□□□ 0.57
COL23A1-202ENST00000407622 TMED8Q6PL24 325 aaPredicted RBP18.61■□□□□ 0.57
COL23A1-202ENST00000407622 USP17L2Q6R6M4 530 aa18.61■□□□□ 0.57
COL23A1-202ENST00000407622 ANKRD20A12PQ8NF67 263 aa18.61■□□□□ 0.57
COL23A1-202ENST00000407622 CCSER1Q9C0I3 900 aa18.61■□□□□ 0.57
COL23A1-202ENST00000407622 LEMD3Q9Y2U8 911 aa18.61■□□□□ 0.57
COL23A1-202ENST00000407622 UBR3Q6ZT12 1888 aa18.61■□□□□ 0.57
COL23A1-202ENST00000407622 MB21D1Q8N884 522 aa18.61■□□□□ 0.57
COL23A1-202ENST00000407622 PES1O00541 588 aaKnown RBP18.6■□□□□ 0.57
COL23A1-202ENST00000407622 RHOBTB3O94955 611 aa18.6■□□□□ 0.57
COL23A1-202ENST00000407622 HMGB2P26583 209 aaKnown RBP18.6■□□□□ 0.57
COL23A1-202ENST00000407622 CDK8P49336 464 aa18.6■□□□□ 0.57
COL23A1-202ENST00000407622 NAPAP54920 295 aa18.6■□□□□ 0.57
COL23A1-202ENST00000407622 GPSM2P81274 684 aa18.6■□□□□ 0.57
COL23A1-202ENST00000407622 KCNB1Q14721 858 aa18.6■□□□□ 0.57
COL23A1-202ENST00000407622 LETM2Q2VYF4 491 aa18.6■□□□□ 0.57
COL23A1-202ENST00000407622 AMOTL1Q8IY63 956 aa18.6■□□□□ 0.57
COL23A1-202ENST00000407622 GIMAP8Q8ND71 665 aaPredicted RBP18.6■□□□□ 0.57
COL23A1-202ENST00000407622 ZNF507Q8TCN5 953 aa18.6■□□□□ 0.57
COL23A1-202ENST00000407622 ANKZF1Q9H8Y5 726 aa18.6■□□□□ 0.57
COL23A1-202ENST00000407622 TFR2Q9UP52 801 aa18.6■□□□□ 0.57
COL23A1-202ENST00000407622 LGALS16A8MUM7 142 aa18.6■□□□□ 0.57
COL23A1-202ENST00000407622 NKRFO15226 690 aaKnown RBP eCLIP18.6■□□□□ 0.57
COL23A1-202ENST00000407622 GYS1P13807 737 aa18.6■□□□□ 0.57
COL23A1-202ENST00000407622 GSTO1P78417 241 aa18.6■□□□□ 0.57
COL23A1-202ENST00000407622 TRIM14Q14142 442 aa18.6■□□□□ 0.57
COL23A1-202ENST00000407622 TTI2Q6NXR4 508 aa18.6■□□□□ 0.57
COL23A1-202ENST00000407622 TRIM47Q96LD4 638 aa18.6■□□□□ 0.57
COL23A1-202ENST00000407622 EYA3Q99504 573 aa18.6■□□□□ 0.57
COL23A1-202ENST00000407622 ZMYND12Q9H0C1 365 aa18.6■□□□□ 0.57
COL23A1-202ENST00000407622 CTAGE9A4FU28 777 aa18.59■□□□□ 0.57
COL23A1-202ENST00000407622 ZBTB22O15209 634 aa18.59■□□□□ 0.57
COL23A1-202ENST00000407622 CCNT1O60563 726 aaKnown RBP18.59■□□□□ 0.57
COL23A1-202ENST00000407622 ZNF804AQ7Z570 1209 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms