RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 IFT81Q8WYA0 676 aa18.18■□□□□ 0.5
CBX6-202ENST00000407418 LZTFL1Q9NQ48 299 aa18.18■□□□□ 0.5
CBX6-202ENST00000407418 hCG_1984214I3L0E3 225 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 FAM178BQ8IXR5 827 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 ZNF713Q8N859 430 aaPredicted RBP18.17■□□□□ 0.5
CBX6-202ENST00000407418 KCNK9Q9NPC2 374 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 LARSQ9P2J5 1176 aaKnown RBP18.17■□□□□ 0.5
CBX6-202ENST00000407418 FAM184BQ9ULE4 1060 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 VAV2P52735 878 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 POSTNQ15063 836 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 SFMBT2Q5VUG0 894 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 LRCH2Q5VUJ6 765 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 MICAL1Q8TDZ2 1067 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 KDM2BQ8NHM5 1336 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 SMIM23A6NLE4 172 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 ACTN4O43707 911 aaKnown RBP18.17■□□□□ 0.5
CBX6-202ENST00000407418 GNAT1P11488 350 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 ITKQ08881 620 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 ARMCX5Q6P1M9 558 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 TMEM106CQ9BVX2 250 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 PIK3CAP42336 1068 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 HADHQ16836 314 aaKnown RBP18.17■□□□□ 0.5
CBX6-202ENST00000407418 ARHGAP44Q17R89 818 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 MYOCDQ8IZQ8 938 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 ZWINTO95229 277 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 VIMP08670 466 aaKnown RBP18.17■□□□□ 0.5
CBX6-202ENST00000407418 ANKS4BQ8N8V4 417 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 SERPINB13Q9UIV8 391 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 CLASP1Q7Z460 1538 aa18.17■□□□□ 0.5
CBX6-202ENST00000407418 TARBP1Q13395 1621 aaKnown RBP18.17■□□□□ 0.5
CBX6-202ENST00000407418 CLCN1P35523 988 aa18.16■□□□□ 0.5
CBX6-202ENST00000407418 TPD52P55327 224 aaPredicted RBP18.16■□□□□ 0.5
CBX6-202ENST00000407418 MIGA2Q7L4E1 593 aa18.16■□□□□ 0.5
CBX6-202ENST00000407418 MICALL1Q8N3F8 863 aa18.16■□□□□ 0.5
CBX6-202ENST00000407418 KIF9Q9HAQ2 790 aa18.16■□□□□ 0.5
CBX6-202ENST00000407418 SEC31BQ9NQW1 1179 aa18.16■□□□□ 0.5
CBX6-202ENST00000407418 LRMPQ12912 555 aa18.16■□□□□ 0.5
CBX6-202ENST00000407418 BAG1Q99933 345 aaPredicted RBP18.16■□□□□ 0.5
CBX6-202ENST00000407418 UTP11Q9Y3A2 253 aaKnown RBP18.16■□□□□ 0.5
CBX6-202ENST00000407418 AFG3L2Q9Y4W6 797 aa18.16■□□□□ 0.5
CBX6-202ENST00000407418 GOLGA8CPA6NN73 597 aa18.16■□□□□ 0.5
CBX6-202ENST00000407418 XRCC5P13010 732 aaKnown RBP18.16■□□□□ 0.5
CBX6-202ENST00000407418 SLC12A2P55011 1212 aa18.16■□□□□ 0.5
CBX6-202ENST00000407418 CCDC6Q16204 474 aa18.16■□□□□ 0.5
CBX6-202ENST00000407418 NLRP10Q86W26 655 aa18.16■□□□□ 0.5
CBX6-202ENST00000407418 CCDC89Q8N998 374 aa18.16■□□□□ 0.5
CBX6-202ENST00000407418 SNX25Q9H3E2 840 aa18.16■□□□□ 0.5
CBX6-202ENST00000407418 CACTINQ8WUQ7 758 aaKnown RBP18.16■□□□□ 0.5
CBX6-202ENST00000407418 ZNF274Q96GC6 653 aaPredicted RBP18.16■□□□□ 0.5
CBX6-202ENST00000407418 IGSF1Q8N6C5 1336 aa18.16■□□□□ 0.5
CBX6-202ENST00000407418 CARMIL3Q8ND23 1372 aa18.16■□□□□ 0.5
CBX6-202ENST00000407418 ELF1P32519 619 aa18.16■□□□□ 0.5
CBX6-202ENST00000407418 MUM1L1Q5H9M0 696 aa18.16■□□□□ 0.5
CBX6-202ENST00000407418 KCTD1Q719H9 257 aa18.16■□□□□ 0.5
CBX6-202ENST00000407418 SYNE4Q8N205 404 aa18.15■□□□□ 0.5
CBX6-202ENST00000407418 OTUD7AQ8TE49 926 aaPredicted RBP18.15■□□□□ 0.5
CBX6-202ENST00000407418 BSDC1Q9NW68 430 aaPredicted RBP18.15■□□□□ 0.5
CBX6-202ENST00000407418 KLHL30Q0D2K2 578 aa18.15■□□□□ 0.5
CBX6-202ENST00000407418 CASC4Q6P4E1 433 aa18.15■□□□□ 0.5
CBX6-202ENST00000407418 FOXP4Q8IVH2 680 aaPredicted RBP18.15■□□□□ 0.5
CBX6-202ENST00000407418 GPKOWQ92917 476 aaPredicted RBP eCLIP18.15■□□□□ 0.5
CBX6-202ENST00000407418 ARFGAP3Q9NP61 516 aa18.15■□□□□ 0.5
CBX6-202ENST00000407418 MYO1AQ9UBC5 1043 aa18.15■□□□□ 0.5
CBX6-202ENST00000407418 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.15■□□□□ 0.5
CBX6-202ENST00000407418 V9GYY5 206 aaPredicted RBP18.15■□□□□ 0.5
CBX6-202ENST00000407418 SPATA31A6Q5VVP1 1343 aa18.15■□□□□ 0.5
CBX6-202ENST00000407418 BBS5Q8N3I7 341 aa18.15■□□□□ 0.5
CBX6-202ENST00000407418 EN1Q05925 392 aaPredicted RBP18.15■□□□□ 0.5
CBX6-202ENST00000407418 MFSD14CQ5VZR4 134 aa18.15■□□□□ 0.5
CBX6-202ENST00000407418 HAUS1Q96CS2 278 aa18.15■□□□□ 0.5
CBX6-202ENST00000407418 RNF123Q5XPI4 1314 aa18.15■□□□□ 0.5
CBX6-202ENST00000407418 STK25O00506 426 aa18.15■□□□□ 0.5
CBX6-202ENST00000407418 ANXA13P27216 316 aa18.15■□□□□ 0.5
CBX6-202ENST00000407418 SARNPP82979 210 aaKnown RBP18.15■□□□□ 0.5
CBX6-202ENST00000407418 LGSNQ5TDP6 509 aa18.15■□□□□ 0.5
CBX6-202ENST00000407418 SCYL2Q6P3W7 929 aa18.15■□□□□ 0.5
CBX6-202ENST00000407418 WDR11Q9BZH6 1224 aa18.15■□□□□ 0.5
CBX6-202ENST00000407418 M0R2C6 588 aa18.14■□□□□ 0.5
CBX6-202ENST00000407418 KRT10P13645 584 aa18.14■□□□□ 0.5
CBX6-202ENST00000407418 TBC1D10BQ4KMP7 808 aaPredicted RBP18.14■□□□□ 0.5
CBX6-202ENST00000407418 ZBTB33Q86T24 672 aa18.14■□□□□ 0.5
CBX6-202ENST00000407418 VPS52Q8N1B4 723 aa18.14■□□□□ 0.5
CBX6-202ENST00000407418 MKRN1Q9UHC7 482 aaKnown RBP18.14■□□□□ 0.5
CBX6-202ENST00000407418 CSPG5O95196 566 aa18.14■□□□□ 0.49
CBX6-202ENST00000407418 PDE6CP51160 858 aa18.14■□□□□ 0.49
CBX6-202ENST00000407418 SSH3Q8TE77 659 aa18.14■□□□□ 0.49
CBX6-202ENST00000407418 UBLCP1Q8WVY7 318 aaPredicted RBP18.14■□□□□ 0.49
CBX6-202ENST00000407418 RAB20Q9NX57 234 aa18.14■□□□□ 0.49
CBX6-202ENST00000407418 SLC12A6Q9UHW9 1150 aa18.14■□□□□ 0.49
CBX6-202ENST00000407418 PSAPP07602 524 aa18.14■□□□□ 0.49
CBX6-202ENST00000407418 NLRP12P59046 1061 aa18.14■□□□□ 0.49
CBX6-202ENST00000407418 AOC3Q16853 763 aa18.14■□□□□ 0.49
CBX6-202ENST00000407418 TTC31Q49AM3 519 aaPredicted RBP18.14■□□□□ 0.49
CBX6-202ENST00000407418 ATG3Q9NT62 314 aa18.14■□□□□ 0.49
CBX6-202ENST00000407418 ECE2O60344 883 aa18.14■□□□□ 0.49
CBX6-202ENST00000407418 LACTBP83111 547 aaPredicted RBP18.14■□□□□ 0.49
CBX6-202ENST00000407418 CCDC84Q86UT8 332 aaPredicted RBP18.14■□□□□ 0.49
CBX6-202ENST00000407418 NKIRAS1Q9NYS0 192 aa18.14■□□□□ 0.49
CBX6-202ENST00000407418 DAAM2Q86T65 1068 aa18.14■□□□□ 0.49
CBX6-202ENST00000407418 POMGNT1Q8WZA1 660 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms