RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ZBTB38Q8NAP3 1195 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P19-201ENST00000403971 ASB11Q8WXH4 323 aa7.34□□□□□ -1.23
HMGB3P19-201ENST00000403971 FCRL3Q96P31 734 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P19-201ENST00000403971 AARSD1Q9BTE6 412 aaKnown RBP7.34□□□□□ -1.23
HMGB3P19-201ENST00000403971 SLC12A9Q9BXP2 914 aa7.34□□□□□ -1.23
HMGB3P19-201ENST00000403971 CWC22Q9HCG8 908 aaKnown RBP7.34□□□□□ -1.23
HMGB3P19-201ENST00000403971 TCFL5Q9UL49 500 aa7.34□□□□□ -1.23
HMGB3P19-201ENST00000403971 CD8BP10966 210 aa7.33□□□□□ -1.24
HMGB3P19-201ENST00000403971 L1CAMP32004 1257 aa7.33□□□□□ -1.24
HMGB3P19-201ENST00000403971 BMP8BP34820 402 aa7.33□□□□□ -1.24
HMGB3P19-201ENST00000403971 POU4F1Q01851 419 aa7.33□□□□□ -1.24
HMGB3P19-201ENST00000403971 EGR3Q06889 387 aa7.33□□□□□ -1.24
HMGB3P19-201ENST00000403971 CYP4F3Q08477 520 aa7.33□□□□□ -1.24
HMGB3P19-201ENST00000403971 GRB10Q13322 594 aa7.33□□□□□ -1.24
HMGB3P19-201ENST00000403971 SDE2Q6IQ49 451 aa7.33□□□□□ -1.24
HMGB3P19-201ENST00000403971 NFXL1Q6ZNB6 911 aa7.33□□□□□ -1.24
HMGB3P19-201ENST00000403971 CRACR2BQ8N4Y2 399 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P19-201ENST00000403971 TRAV20A0A0B4J274 112 aa7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 SSU72P8A0A1W2PR75 194 aa7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 PRODHO43272 600 aa7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 ZNF205O95201 554 aa7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 SPINK2P20155 84 aa7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 PCBP3P57721 371 aaKnown RBP7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 PRSS53Q2L4Q9 553 aa7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 FAM209AQ5JX71 171 aa7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 RTP2Q5QGT7 225 aa7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 TMPRSS7Q7RTY8 843 aa7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 DTX1Q86Y01 620 aa7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 LINC00116Q8NCU8 138 aa7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 MISP3Q96FF7 219 aa7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 EXOC2Q96KP1 924 aa7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 IER2Q9BTL4 223 aa7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 NKX2-4Q9H2Z4 354 aa7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 CARS2Q9HA77 564 aaKnown RBP7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 FANCLQ9NW38 375 aa7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 CCDC39Q9UFE4 941 aa7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 SLC5A6Q9Y289 635 aa7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 BAZ1AQ9NRL2 1556 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P19-201ENST00000403971 TMEM82A0PJX8 343 aa7.31□□□□□ -1.24
HMGB3P19-201ENST00000403971 ADAMTS4O75173 837 aa7.31□□□□□ -1.24
HMGB3P19-201ENST00000403971 SNRPB2P08579 225 aaKnown RBP7.31□□□□□ -1.24
HMGB3P19-201ENST00000403971 GSTM1P09488 218 aa7.31□□□□□ -1.24
HMGB3P19-201ENST00000403971 ECI1P42126 302 aa7.31□□□□□ -1.24
HMGB3P19-201ENST00000403971 TEKQ02763 1124 aa7.31□□□□□ -1.24
HMGB3P19-201ENST00000403971 SCRN1Q12765 414 aa7.31□□□□□ -1.24
HMGB3P19-201ENST00000403971 OSBP2Q969R2 916 aa7.31□□□□□ -1.24
HMGB3P19-201ENST00000403971 AP5S1Q9NUS5 200 aa7.31□□□□□ -1.24
HMGB3P19-201ENST00000403971 KIAA1324LA8MWY0 1029 aaPredicted RBP7.3□□□□□ -1.24
HMGB3P19-201ENST00000403971 AURKAO14965 403 aa7.3□□□□□ -1.24
HMGB3P19-201ENST00000403971 DLX3O60479 287 aa7.3□□□□□ -1.24
HMGB3P19-201ENST00000403971 PRNPP04156 253 aa7.3□□□□□ -1.24
HMGB3P19-201ENST00000403971 PABPC1P11940 636 aaKnown RBP7.3□□□□□ -1.24
HMGB3P19-201ENST00000403971 RPL10P27635 214 aaKnown RBP7.3□□□□□ -1.24
HMGB3P19-201ENST00000403971 KCNJ6P48051 423 aa7.3□□□□□ -1.24
HMGB3P19-201ENST00000403971 GFRA1P56159 465 aa7.3□□□□□ -1.24
HMGB3P19-201ENST00000403971 NSMFQ6X4W1 530 aa7.3□□□□□ -1.24
HMGB3P19-201ENST00000403971 RNF111Q6ZNA4 994 aa7.3□□□□□ -1.24
HMGB3P19-201ENST00000403971 TMEM145Q8NBT3 493 aa7.3□□□□□ -1.24
HMGB3P19-201ENST00000403971 CDC6Q99741 560 aa7.3□□□□□ -1.24
HMGB3P19-201ENST00000403971 CDADC1Q9BWV3 514 aa7.3□□□□□ -1.24
HMGB3P19-201ENST00000403971 GPRC5CQ9NQ84 441 aa7.3□□□□□ -1.24
HMGB3P19-201ENST00000403971 PRDM7Q9NQW5 492 aa7.3□□□□□ -1.24
HMGB3P19-201ENST00000403971 CYP26B1Q9NR63 512 aa7.3□□□□□ -1.24
HMGB3P19-201ENST00000403971 TMEM260Q9NX78 707 aa7.3□□□□□ -1.24
HMGB3P19-201ENST00000403971 SMARCA4P51532 1647 aa7.3□□□□□ -1.24
HMGB3P19-201ENST00000403971 CECR2Q9BXF3 1484 aa7.3□□□□□ -1.24
HMGB3P19-201ENST00000403971 TRBV23-1A0A0A0MS06 115 aa7.29□□□□□ -1.24
HMGB3P19-201ENST00000403971 BLACEA4D250 179 aa7.29□□□□□ -1.24
HMGB3P19-201ENST00000403971 C2orf71A6NGG8 1288 aa7.29□□□□□ -1.24
HMGB3P19-201ENST00000403971 FGFR1P11362 822 aa7.29□□□□□ -1.24
HMGB3P19-201ENST00000403971 NOP2P46087 812 aaKnown RBP7.29□□□□□ -1.24
HMGB3P19-201ENST00000403971 ZP2Q05996 745 aa7.29□□□□□ -1.24
HMGB3P19-201ENST00000403971 WAPLQ7Z5K2 1190 aa7.29□□□□□ -1.24
HMGB3P19-201ENST00000403971 STK11IPQ8N1F8 1099 aa7.29□□□□□ -1.24
HMGB3P19-201ENST00000403971 ZSWIM2Q8NEG5 633 aa7.29□□□□□ -1.24
HMGB3P19-201ENST00000403971 FLCNQ8NFG4 579 aa7.29□□□□□ -1.24
HMGB3P19-201ENST00000403971 BACE2Q9Y5Z0 518 aa7.29□□□□□ -1.24
HMGB3P19-201ENST00000403971 CADPSQ9ULU8 1353 aa7.29□□□□□ -1.24
HMGB3P19-201ENST00000403971 THBDP07204 575 aa7.28□□□□□ -1.24
HMGB3P19-201ENST00000403971 HOXC12P31275 282 aa7.28□□□□□ -1.24
HMGB3P19-201ENST00000403971 LONRF2Q1L5Z9 754 aa7.28□□□□□ -1.24
HMGB3P19-201ENST00000403971 TMEM67Q5HYA8 995 aa7.28□□□□□ -1.24
HMGB3P19-201ENST00000403971 RALGPS1Q5JS13 557 aa7.28□□□□□ -1.24
HMGB3P19-201ENST00000403971 ZMYM1Q5SVZ6 1142 aa7.28□□□□□ -1.24
HMGB3P19-201ENST00000403971 ANGEL2Q5VTE6 544 aaKnown RBP7.28□□□□□ -1.24
HMGB3P19-201ENST00000403971 DENND5AQ6IQ26 1287 aa7.28□□□□□ -1.24
HMGB3P19-201ENST00000403971 VSIG10LQ86VR7 867 aa7.28□□□□□ -1.24
HMGB3P19-201ENST00000403971 COPS5Q92905 334 aa7.28□□□□□ -1.24
HMGB3P19-201ENST00000403971 KISS1RQ969F8 398 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P19-201ENST00000403971 C1orf159Q96HA4 380 aa7.28□□□□□ -1.24
HMGB3P19-201ENST00000403971 SLC26A8Q96RN1 970 aa7.28□□□□□ -1.24
HMGB3P19-201ENST00000403971 DHRS4Q9BTZ2 278 aa7.28□□□□□ -1.24
HMGB3P19-201ENST00000403971 PAK6Q9NQU5 681 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P19-201ENST00000403971 PCMTD2Q9NV79 361 aa7.28□□□□□ -1.24
HMGB3P19-201ENST00000403971 EBF1Q9UH73 591 aa7.28□□□□□ -1.24
HMGB3P19-201ENST00000403971 MRPS23Q9Y3D9 190 aaKnown RBP7.28□□□□□ -1.24
HMGB3P19-201ENST00000403971 DNAJC25-GNG10A0A024R161 153 aa7.27□□□□□ -1.25
HMGB3P19-201ENST00000403971 ENPP3O14638 875 aa7.27□□□□□ -1.25
HMGB3P19-201ENST00000403971 PPP1R12AO14974 1030 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P19-201ENST00000403971 CDC45O75419 566 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms