RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 RIOK1Q9BRS2 568 aaKnown RBP22.33■■□□□ 1.17
CCDC47-202ENST00000403162 TMX4Q9H1E5 349 aaPredicted RBP22.33■■□□□ 1.17
CCDC47-202ENST00000403162 L1RE1Q9UN81 338 aa22.33■■□□□ 1.17
CCDC47-202ENST00000403162 CACNA1SQ13698 1873 aa22.33■■□□□ 1.17
CCDC47-202ENST00000403162 DPEP1P16444 411 aa22.33■■□□□ 1.16
CCDC47-202ENST00000403162 PTGER2P43116 358 aa22.33■■□□□ 1.16
CCDC47-202ENST00000403162 CAVIN4Q5BKX8 364 aa22.33■■□□□ 1.16
CCDC47-202ENST00000403162 RRAGBQ5VZM2 374 aa22.33■■□□□ 1.16
CCDC47-202ENST00000403162 IQCA1Q86XH1 822 aa22.33■■□□□ 1.16
CCDC47-202ENST00000403162 ANKRD20A12PQ8NF67 263 aa22.33■■□□□ 1.16
CCDC47-202ENST00000403162 CNTNAP5Q8WYK1 1306 aa22.33■■□□□ 1.16
CCDC47-202ENST00000403162 UFL1O94874 794 aa22.32■■□□□ 1.16
CCDC47-202ENST00000403162 NOM1Q5C9Z4 860 aaKnown RBP22.32■■□□□ 1.16
CCDC47-202ENST00000403162 TCP11X2Q5H9J9 407 aa22.32■■□□□ 1.16
CCDC47-202ENST00000403162 GGA1Q9UJY5 639 aa22.32■■□□□ 1.16
CCDC47-202ENST00000403162 BAZ2AQ9UIF9 1905 aaKnown RBP22.32■■□□□ 1.16
CCDC47-202ENST00000403162 CTAGE15A4D2H0 777 aa22.32■■□□□ 1.16
CCDC47-202ENST00000403162 SMIM22K7EJ46 135 aa22.32■■□□□ 1.16
CCDC47-202ENST00000403162 EIF3JO75822 258 aaKnown RBP22.32■■□□□ 1.16
CCDC47-202ENST00000403162 CTAGE8P0CG41 777 aa22.32■■□□□ 1.16
CCDC47-202ENST00000403162 ATP2B4P23634 1241 aa22.32■■□□□ 1.16
CCDC47-202ENST00000403162 ZNF658Q5TYW1 1059 aaPredicted RBP22.32■■□□□ 1.16
CCDC47-202ENST00000403162 CTAGE6Q86UF2 777 aa22.32■■□□□ 1.16
CCDC47-202ENST00000403162 CTAGE4Q8IX94 777 aa22.32■■□□□ 1.16
CCDC47-202ENST00000403162 GBP3Q9H0R5 595 aa22.32■■□□□ 1.16
CCDC47-202ENST00000403162 RMND1Q9NWS8 449 aa22.32■■□□□ 1.16
CCDC47-202ENST00000403162 ZNF219Q9P2Y4 722 aaPredicted RBP22.32■■□□□ 1.16
CCDC47-202ENST00000403162 STAMQ92783 540 aa22.31■■□□□ 1.16
CCDC47-202ENST00000403162 NUP88Q99567 741 aaPredicted RBP22.31■■□□□ 1.16
CCDC47-202ENST00000403162 MTRQ99707 1265 aa22.31■■□□□ 1.16
CCDC47-202ENST00000403162 VPS16Q9H269 839 aa22.31■■□□□ 1.16
CCDC47-202ENST00000403162 BLZF1Q9H2G9 400 aa22.31■■□□□ 1.16
CCDC47-202ENST00000403162 KCNJ18B7U540 433 aa22.31■■□□□ 1.16
CCDC47-202ENST00000403162 AMPD2Q01433 879 aa22.31■■□□□ 1.16
CCDC47-202ENST00000403162 KCNJ12Q14500 433 aa22.31■■□□□ 1.16
CCDC47-202ENST00000403162 GPR101Q96P66 508 aaPredicted RBP22.31■■□□□ 1.16
CCDC47-202ENST00000403162 PDE11AQ9HCR9 933 aa22.31■■□□□ 1.16
CCDC47-202ENST00000403162 ABCB6Q9NP58 842 aa22.31■■□□□ 1.16
CCDC47-202ENST00000403162 PODXL2Q9NZ53 605 aa22.31■■□□□ 1.16
CCDC47-202ENST00000403162 KIF13BQ9NQT8 1826 aa22.3■■□□□ 1.16
CCDC47-202ENST00000403162 LRRC37AA6NMS7 1700 aa22.3■■□□□ 1.16
CCDC47-202ENST00000403162 RNF225M0QZC1 329 aaPredicted RBP22.3■■□□□ 1.16
CCDC47-202ENST00000403162 ABL1P00519 1130 aa22.3■■□□□ 1.16
CCDC47-202ENST00000403162 RAD51AP2Q09MP3 1159 aa22.3■■□□□ 1.16
CCDC47-202ENST00000403162 ZSCAN26Q16670 478 aa22.3■■□□□ 1.16
CCDC47-202ENST00000403162 NELFBQ8WX92 580 aa22.3■■□□□ 1.16
CCDC47-202ENST00000403162 FAM84BQ96KN1 310 aaPredicted RBP22.3■■□□□ 1.16
CCDC47-202ENST00000403162 TSPYL1Q9H0U9 437 aa22.3■■□□□ 1.16
CCDC47-202ENST00000403162 TMEM51Q9NW97 253 aa22.3■■□□□ 1.16
CCDC47-202ENST00000403162 TAB2Q9NYJ8 693 aa22.3■■□□□ 1.16
CCDC47-202ENST00000403162 TGFB2P61812 414 aa22.29■■□□□ 1.16
CCDC47-202ENST00000403162 MCM6Q14566 821 aa22.29■■□□□ 1.16
CCDC47-202ENST00000403162 ABCF2Q9UG63 623 aa22.29■■□□□ 1.16
CCDC47-202ENST00000403162 IQSEC3Q9UPP2 1182 aaPredicted RBP22.29■■□□□ 1.16
CCDC47-202ENST00000403162 SLX4Q8IY92 1834 aa22.29■■□□□ 1.16
CCDC47-202ENST00000403162 C6orf229H3BNL8 230 aa22.29■■□□□ 1.16
CCDC47-202ENST00000403162 KCNA3P22001 575 aa22.29■■□□□ 1.16
CCDC47-202ENST00000403162 CDC25AP30304 524 aa22.29■■□□□ 1.16
CCDC47-202ENST00000403162 KRT9P35527 623 aa22.29■■□□□ 1.16
CCDC47-202ENST00000403162 GYS2P54840 703 aa22.29■■□□□ 1.16
CCDC47-202ENST00000403162 TXNRD3Q86VQ6 643 aa22.29■■□□□ 1.16
CCDC47-202ENST00000403162 TTLL6Q8N841 843 aa22.29■■□□□ 1.16
CCDC47-202ENST00000403162 GOLGA5Q8TBA6 731 aa22.29■■□□□ 1.16
CCDC47-202ENST00000403162 TBC1D16Q8TBP0 767 aa22.29■■□□□ 1.16
CCDC47-202ENST00000403162 SPON1Q9HCB6 807 aa22.29■■□□□ 1.16
CCDC47-202ENST00000403162 GNL3LQ9NVN8 582 aaKnown RBP22.29■■□□□ 1.16
CCDC47-202ENST00000403162 POLLQ9UGP5 575 aa22.29■■□□□ 1.16
CCDC47-202ENST00000403162 MYO6Q9UM54 1294 aa22.29■■□□□ 1.16
CCDC47-202ENST00000403162 ZBTB22O15209 634 aa22.28■■□□□ 1.16
CCDC47-202ENST00000403162 COBLO75128 1261 aa22.28■■□□□ 1.16
CCDC47-202ENST00000403162 RPN1P04843 607 aaKnown RBP22.28■■□□□ 1.16
CCDC47-202ENST00000403162 HIBADHP31937 336 aaKnown RBP22.28■■□□□ 1.16
CCDC47-202ENST00000403162 VSNL1P62760 191 aa22.28■■□□□ 1.16
CCDC47-202ENST00000403162 SLC20A2Q08357 652 aa22.28■■□□□ 1.16
CCDC47-202ENST00000403162 IL17AQ16552 155 aa22.28■■□□□ 1.16
CCDC47-202ENST00000403162 ARL6IP4Q66PJ3 421 aaKnown RBP22.28■■□□□ 1.16
CCDC47-202ENST00000403162 DPP8Q6V1X1 898 aaPredicted RBP22.28■■□□□ 1.16
CCDC47-202ENST00000403162 FBXO33Q7Z6M2 555 aa22.28■■□□□ 1.16
CCDC47-202ENST00000403162 SRBD1Q8N5C6 995 aaKnown RBP22.28■■□□□ 1.16
CCDC47-202ENST00000403162 CAPN2P17655 700 aa22.28■■□□□ 1.16
CCDC47-202ENST00000403162 SLF1Q9BQI6 1058 aa22.28■■□□□ 1.16
CCDC47-202ENST00000403162 COL1A1P02452 1464 aaPredicted RBP22.28■■□□□ 1.16
CCDC47-202ENST00000403162 IRS2Q9Y4H2 1338 aa22.27■■□□□ 1.16
CCDC47-202ENST00000403162 CYP2D7A0A087X1C5 515 aa22.27■■□□□ 1.16
CCDC47-202ENST00000403162 H7C1D1 291 aa22.27■■□□□ 1.16
CCDC47-202ENST00000403162 RHOXF2BP0C7M4 288 aa22.27■■□□□ 1.16
CCDC47-202ENST00000403162 SCG2P13521 617 aa22.27■■□□□ 1.16
CCDC47-202ENST00000403162 LONP1P36776 959 aaKnown RBP22.27■■□□□ 1.16
CCDC47-202ENST00000403162 LMAN1P49257 510 aa22.27■■□□□ 1.16
CCDC47-202ENST00000403162 WDR93Q6P2C0 686 aa22.27■■□□□ 1.16
CCDC47-202ENST00000403162 PIK3AP1Q6ZUJ8 805 aa22.27■■□□□ 1.16
CCDC47-202ENST00000403162 CTCFLQ8NI51 663 aaPredicted RBP22.27■■□□□ 1.16
CCDC47-202ENST00000403162 RHOXF2Q9BQY4 288 aa22.27■■□□□ 1.16
CCDC47-202ENST00000403162 CWC15Q9P013 229 aaKnown RBP22.27■■□□□ 1.16
CCDC47-202ENST00000403162 NDUFA10O95299 355 aa22.26■■□□□ 1.15
CCDC47-202ENST00000403162 TFRCP02786 760 aaKnown RBP22.26■■□□□ 1.15
CCDC47-202ENST00000403162 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.26■■□□□ 1.15
CCDC47-202ENST00000403162 EPN1Q9Y6I3 576 aaPredicted RBP22.26■■□□□ 1.15
CCDC47-202ENST00000403162 NLRP5P59047 1200 aa22.26■■□□□ 1.15
CCDC47-202ENST00000403162 UBXN1Q04323 297 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms